* using log directory '/CRANPkg/check/Hmisc.Rcheck' * using R version 2.1.1, 2005-06-20 * checking for file 'Hmisc/DESCRIPTION' ... OK * this is package 'Hmisc' version '3.0-6' * checking if this is a source package ... OK * checking whether package 'Hmisc' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking package dependencies ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for syntax errors ... OK * checking R files for library.dynam ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... WARNING Foreign function calls without 'PACKAGE' argument: .Fortran("hoeffd", ...) .Fortran("largrec", ...) .Fortran("dqrls", ...) .Fortran("rcorr", ...) .Fortran("cidxcn", ...) .Fortran("cidxcp", ...) .C(if (under.unix || version$major < 4 || (version$major == 4 && , ...) .C( version$minor < 7)) "rowsum" else "S_rowsum", ...) .Fortran("approx", ...) .Fortran("wclosepw", ...) .Fortran("wclosest", ...) .C("loess_raw", ...) .C("loess_raw", ...) See section 'System and foreign language interfaces' of the 'Writing R Extensions' manual. * checking Rd files ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking for CRLF line endings in C/C++/Fortran sources/headers ... OK * creating Hmisc-Ex.R ... OK * checking examples ... ERROR Running examples in Hmisc-Ex.R failed. The error most likely occurred in: > ### * transace > > flush(stderr()); flush(stdout()) > > ### Name: transace > ### Title: Additive Regression and Transformations using ace or avas > ### Aliases: transace areg.boot print.areg.boot plot.areg.boot > ### predict.areg.boot summary.areg.boot print.summary.areg.boot > ### Function.areg.boot Mean Mean.areg.boot Quantile Quantile.areg.boot > ### monotone smearingEst > ### Keywords: nonparametric smooth multivariate nonlinear regression > > ### ** Examples > > # xtrans <- transace(cbind(age,sex,blood.pressure,race.code), > # binary='sex', monotonic='age', > # categorical='race.code') > > # Generate random data from the model y = exp(x1 + epsilon/3) where > # x1 and epsilon are Gaussian(0,1) > set.seed(171) # to be able to reproduce example > x1 <- rnorm(200) > x2 <- runif(200) # a variable that is really unrelated to y] > x3 <- factor(sample(c('cat','dog','cow'), 200,TRUE)) # also unrelated to y > y <- exp(x1 + rnorm(200)/3) > f <- areg.boot(y ~ x1 + x2 + x3, B=40) Loading required package: acepack