* Installing *source* package 'XML' ... checking for gcc... gcc checking for C compiler default output... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ANSI C... none needed checking how to run the C preprocessor... gcc -E checking for xml2-config... /usr/bin/xml2-config Located parser file -I/usr/include/libxml2/parser.h Checking for 1.8: -I/usr/include/libxml2 Using libxml2.* checking for gzopen in -lz... yes checking for xmlParseFile in -lxml2... yes checking for xmlHashSize in -lxml2... yes Using built-in xmlHashSize Checking DTD parsing (presence of externalSubset)... checking for xmlHashSize in -lxml2... yes Found xmlHashSize checking for xmlDocDumpFormatMemoryEnc in -lxml2... yes checking libxml/xmlversion.h usability... yes checking libxml/xmlversion.h presence... yes checking for libxml/xmlversion.h... yes Expat: FALSE Checking for return type of xmlHashScan element routine. No return value for xmlHashScan **************************************** Configuration information: Libxml settings libxml include directory: -I/usr/include/libxml2 libxml library directory: -L/usr/lib -lxml2 -lz -lpthread -liconv -lm -lz -lxml2 libxml 2: -DLIBXML2=1 Compilation flags: -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 Link flags: -L/usr/lib -lxml2 -lz -lpthread -liconv -lm -lz -lxml2 **************************************** configure: creating ./config.status config.status: creating src/Makevars config.status: creating R/supports.R config.status: creating inst/scripts/RSXML.csh config.status: creating inst/scripts/RSXML.bsh ** libs gcc-3.3 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -I. -DLIBXML2=1 -I/usr/local/include -fno-common -g -O2 -c DocParse.c -o DocParse.o gcc-3.3 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -I. -DLIBXML2=1 -I/usr/local/include -fno-common -g -O2 -c EventParse.c -o EventParse.o gcc-3.3 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -I. -DLIBXML2=1 -I/usr/local/include -fno-common -g -O2 -c ExpatParse.c -o ExpatParse.o gcc-3.3 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -I. -DLIBXML2=1 -I/usr/local/include -fno-common -g -O2 -c HTMLParse.c -o HTMLParse.o gcc-3.3 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -I. -DLIBXML2=1 -I/usr/local/include -fno-common -g -O2 -c RSDTD.c -o RSDTD.o gcc-3.3 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -I. -DLIBXML2=1 -I/usr/local/include -fno-common -g -O2 -c RUtils.c -o RUtils.o gcc-3.3 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -I. -DLIBXML2=1 -I/usr/local/include -fno-common -g -O2 -c Utils.c -o Utils.o gcc-3.3 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -I. -DLIBXML2=1 -I/usr/local/include -fno-common -g -O2 -c XMLEventParse.c -o XMLEventParse.o gcc-3.3 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -I. -DLIBXML2=1 -I/usr/local/include -fno-common -g -O2 -c XMLTree.c -o XMLTree.o gcc-3.3 -bundle -flat_namespace -undefined suppress -L/usr/local/lib -o XML.so DocParse.o EventParse.o ExpatParse.o HTMLParse.o RSDTD.o RUtils.o Utils.o XMLEventParse.o XMLTree.o -L/usr/lib -lxml2 -lz -lpthread -liconv -lm -lz -lxml2 -lcc_dynamic -framework R ld: warning multiple definitions of symbol _crc32 /Library/Frameworks/R.framework/R(crc32.lo) definition of _crc32 /usr/lib/libz.dylib(crc32.o) definition of _crc32 ld: warning multiple definitions of symbol _get_crc_table /Library/Frameworks/R.framework/R(crc32.lo) definition of _get_crc_table /usr/lib/libz.dylib(crc32.o) definition of _get_crc_table ld: warning multiple definitions of symbol _deflate /Library/Frameworks/R.framework/R(deflate.lo) definition of _deflate /usr/lib/libz.dylib(deflate.o) definition of _deflate ld: warning multiple definitions of symbol _deflateCopy /Library/Frameworks/R.framework/R(deflate.lo) definition of _deflateCopy /usr/lib/libz.dylib(deflate.o) definition of _deflateCopy ld: warning multiple definitions of symbol _deflateReset /Library/Frameworks/R.framework/R(deflate.lo) definition of _deflateReset /usr/lib/libz.dylib(deflate.o) definition of _deflateReset ld: warning multiple definitions of symbol _deflateSetDictionary /Library/Frameworks/R.framework/R(deflate.lo) definition of _deflateSetDictionary /usr/lib/libz.dylib(deflate.o) definition of _deflateSetDictionary ld: warning multiple definitions of symbol _deflateInit2_ /Library/Frameworks/R.framework/R(deflate.lo) definition of _deflateInit2_ /usr/lib/libz.dylib(deflate.o) definition of _deflateInit2_ ld: warning multiple definitions of symbol _deflateEnd /Library/Frameworks/R.framework/R(deflate.lo) definition of _deflateEnd /usr/lib/libz.dylib(deflate.o) definition of _deflateEnd ld: warning multiple definitions of symbol _deflateParams /Library/Frameworks/R.framework/R(deflate.lo) definition of _deflateParams /usr/lib/libz.dylib(deflate.o) definition of _deflateParams ld: warning multiple definitions of symbol _deflateInit_ /Library/Frameworks/R.framework/R(deflate.lo) definition of _deflateInit_ /usr/lib/libz.dylib(deflate.o) definition of _deflateInit_ ld: warning multiple definitions of symbol _gzeof /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzeof /usr/lib/libz.dylib(gzio.o) definition of _gzeof ld: warning multiple definitions of symbol _gzclose /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzclose /usr/lib/libz.dylib(gzio.o) definition of _gzclose ld: warning multiple definitions of symbol _gzdopen /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzdopen /usr/lib/libz.dylib(gzio.o) definition of _gzdopen ld: warning multiple definitions of symbol _gzerror /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzerror /usr/lib/libz.dylib(gzio.o) definition of _gzerror ld: warning multiple definitions of symbol _gzflush /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzflush /usr/lib/libz.dylib(gzio.o) definition of _gzflush ld: warning multiple definitions of symbol _gzgetc /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzgetc /usr/lib/libz.dylib(gzio.o) definition of _gzgetc ld: warning multiple definitions of symbol _gzgets /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzgets /usr/lib/libz.dylib(gzio.o) definition of _gzgets ld: warning multiple definitions of symbol _gzopen /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzopen /usr/lib/libz.dylib(gzio.o) definition of _gzopen ld: warning multiple definitions of symbol _gzprintf /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzprintf /usr/lib/libz.dylib(gzio.o) definition of _gzprintf ld: warning multiple definitions of symbol _gzputc /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzputc /usr/lib/libz.dylib(gzio.o) definition of _gzputc ld: warning multiple definitions of symbol _gzputs /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzputs /usr/lib/libz.dylib(gzio.o) definition of _gzputs ld: warning multiple definitions of symbol _gzread /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzread /usr/lib/libz.dylib(gzio.o) definition of _gzread ld: warning multiple definitions of symbol _gzrewind /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzrewind /usr/lib/libz.dylib(gzio.o) definition of _gzrewind ld: warning multiple definitions of symbol _gzseek /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzseek /usr/lib/libz.dylib(gzio.o) definition of _gzseek ld: warning multiple definitions of symbol _gzsetparams /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzsetparams /usr/lib/libz.dylib(gzio.o) definition of _gzsetparams ld: warning multiple definitions of symbol _gztell /Library/Frameworks/R.framework/R(gzio.lo) definition of _gztell /usr/lib/libz.dylib(gzio.o) definition of _gztell ld: warning multiple definitions of symbol _gzwrite /Library/Frameworks/R.framework/R(gzio.lo) definition of _gzwrite /usr/lib/libz.dylib(gzio.o) definition of _gzwrite ld: warning multiple definitions of symbol _xerbla_ /Library/Frameworks/R.framework/R(print.lo) definition of _xerbla_ /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib(single module) definition of _xerbla_ ld: warning multiple definitions of symbol _zError /usr/lib/libz.dylib(zutil.o) definition of _zError /Library/Frameworks/R.framework/R(zutil.lo) definition of _zError ld: warning multiple definitions of symbol _zlibVersion /usr/lib/libz.dylib(zutil.o) definition of _zlibVersion /Library/Frameworks/R.framework/R(zutil.lo) definition of _zlibVersion ld: warning multiple definitions of symbol _adler32 /Library/Frameworks/R.framework/R(adler32.lo) definition of _adler32 /usr/lib/libz.dylib(adler32.o) definition of _adler32 ld: warning multiple definitions of symbol _inflateEnd /Library/Frameworks/R.framework/R(inflate.lo) definition of _inflateEnd /usr/lib/libz.dylib(inflate.o) definition of _inflateEnd ld: warning multiple definitions of symbol _inflateSync /Library/Frameworks/R.framework/R(inflate.lo) definition of _inflateSync /usr/lib/libz.dylib(inflate.o) definition of _inflateSync ld: warning multiple definitions of symbol _inflateSyncPoint /Library/Frameworks/R.framework/R(inflate.lo) definition of _inflateSyncPoint /usr/lib/libz.dylib(inflate.o) definition of _inflateSyncPoint ld: warning multiple definitions of symbol _inflate /Library/Frameworks/R.framework/R(inflate.lo) definition of _inflate /usr/lib/libz.dylib(inflate.o) definition of _inflate ld: warning multiple definitions of symbol _inflateSetDictionary /Library/Frameworks/R.framework/R(inflate.lo) definition of _inflateSetDictionary /usr/lib/libz.dylib(inflate.o) definition of _inflateSetDictionary ld: warning multiple definitions of symbol _inflateInit2_ /Library/Frameworks/R.framework/R(inflate.lo) definition of _inflateInit2_ /usr/lib/libz.dylib(inflate.o) definition of _inflateInit2_ ld: warning multiple definitions of symbol _inflateReset /Library/Frameworks/R.framework/R(inflate.lo) definition of _inflateReset /usr/lib/libz.dylib(inflate.o) definition of _inflateReset ld: warning multiple definitions of symbol _inflateInit_ /Library/Frameworks/R.framework/R(inflate.lo) definition of _inflateInit_ /usr/lib/libz.dylib(inflate.o) definition of _inflateInit_ ** R ** inst ** save image ** help >>> Building/Updating help pages for package 'XML' Formats: text html latex example AssignXMLNode text html latex example Doctype-class text html latex example Doctype text html latex example SAXMethods text html latex example SAXState-class text html latex example XMLNode-class text html latex example append.XMLNode text html latex example asXMLNode text html latex example dtdElement text html latex example dtdElementValidEntry text html latex example dtdIsAttribute text html latex example dtdValidElement text html latex example genericSAXHandlers text html latex example length.XMLNode text html latex example libxmlVersion text html latex example names.XMLNode text html latex example newXMLDoc text html latex example parseDTD text html latex example print text html latex example saveXML text html latex example supportsExpat text html latex example toString text html latex example xmlApply text html latex example xmlAttributeType text html latex example xmlAttrs text html latex example xmlChildren text html latex example xmlContainsEntity text html latex example xmlDOMApply text html latex example xmlElementsByTagName text html latex example xmlEventHandler text html latex example xmlEventParse text html latex example xmlGetAttr text html latex example xmlHandler text html latex example xmlName text html latex example xmlNamespace text html latex example xmlNode text html latex example xmlOutput text html latex example xmlParent text html latex example xmlRoot text html latex example xmlSize text html latex example xmlSubset text html latex example xmlTree text html latex example xmlTreeParse text html latex example xmlValue text html latex example ** building package indices ... * DONE (XML)