* using log directory '/CRANPkg/check/gllm.Rcheck' * using R version 2.1.1, 2005-06-20 * checking for file 'gllm/DESCRIPTION' ... OK * this is package 'gllm' version '0.28' * checking if this is a source package ... OK * checking whether package 'gllm' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking package dependencies ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for syntax errors ... OK * checking R files for library.dynam ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... WARNING Foreign function calls without 'PACKAGE' argument: .Fortran("gllm", ...) See section 'System and foreign language interfaces' of the 'Writing R Extensions' manual. * checking Rd files ... WARNING Rd files without 'keyword': /CRANPkg/check/gllm/man/anova.gllm.Rd /CRANPkg/check/gllm/man/print.summary.gllm.Rd /CRANPkg/check/gllm/man/scatter.Rd /CRANPkg/check/gllm/man/summary.gllm.Rd These entries are required in an Rd file. See chapter 'Writing R documentation files' in manual 'Writing R Extensions'. * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... WARNING Codoc mismatches from documentation object 'emgllm': emgllm Code: function(y, s, X, maxit = 1000, tol = 1e-05) Docs: function(y, s, X, maxit = 1000, tol = 1e-07) Codoc mismatches from documentation object 'scoregllm': scoregllm Code: function(y, s, X, m, tol = 1e-05) Docs: function(y, s, X, m, tol = 1e-08) * checking Rd \usage sections ... OK * checking for CRLF line endings in C/C++/Fortran sources/headers ... OK * creating gllm-Ex.R ... OK * checking examples ... OK * creating gllm-manual.tex ... OK * checking gllm-manual.tex ... OK