* using log directory '/CRANPkg/check/haplo.score.Rcheck' * using R version 2.1.1, 2005-06-20 * checking for file 'haplo.score/DESCRIPTION' ... OK * this is package 'haplo.score' version '1.0.2' * checking if this is a source package ... OK * checking whether package 'haplo.score' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking package dependencies ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for syntax errors ... OK * checking R files for library.dynam ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... WARNING Foreign function calls without 'PACKAGE' argument: .C("em", ...) See section 'System and foreign language interfaces' of the 'Writing R Extensions' manual. * checking Rd files ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... WARNING Data codoc mismatches from documentation object 'hla.demo': Variables in data frame 'hla.demo' Code: B.a1 B.a2 DQB.a1 DQB.a2 DRB.a1 DRB.a2 age male resp resp.cat Docs: age male resp resp.cat * checking Rd \usage sections ... OK * checking for CRLF line endings in C/C++/Fortran sources/headers ... OK * creating haplo.score-Ex.R ... OK * checking examples ... OK * creating haplo.score-manual.tex ... OK * checking haplo.score-manual.tex ... OK