BK                      Beddington and Kirkwood life-history method
                        (simple version)
BK_CC                   Beddington and Kirkwood life-history method
                        combined with catch curve analysis
BK_ML                   Beddington and Kirkwood life-history analysis
                        with mean-length estimator of current abundance
Can                     What data-limited methods can be applied to
                        this DLM data object?
Cant                    What methods can't be applied to this DLM data
                        object
CompSRA                 Age-composition-based estimate of current stock
                        depletion given constant Z
DBSRA                   Depletion-Based Stock Reduction Analysis
DBSRA4010               Depletion-Based Stock Reduction Analysis paired
                        with 40-10 rule
DBSRA_40                Depletion-Based Stock Reduction Analysis
                        assuming 40 per cent stock depletion
DBSRA_ML                Depletion-Based Stock Reduction Analysis using
                        mean length estimator of stock depletion
DCAC                    Depletion Corrected Average Catch
DCAC4010                Depletion Corrected Average Catch paired with
                        the 40-10 rule
DCAC_40                 Depletion Corrected Average Catch assuming 40
                        per cent stock depletion
DCAC_ML                 Depletion-Based Stock Reduction Analysis using
                        mean-length estimator of current depletion
DD                      Delay - Difference Stock Assessment with UMSY
                        and MSY leading
DD4010                  Delay - Difference Stock Assessment with UMSY
                        and MSY leading coupled with a 40-10 rule
DLM-class               Class '"DLM"'
DLMDataDir              Directory of the installed packaged on your
                        computer
DLMdat                  Data and Operating model objects
DLMtool-package         Data-Limited Methods Toolkit
DepF                    Depletion Corrected Fratio
DynF                    Dynamic Fratio method
FMSYref                 A reference FMSY method (uses perfect
                        information about FMSY)
FMSYref50               A reference FMSY method that fishes at half of
                        FMSY (uses perfect information about FMSY)
FMSYref75               A reference FMSY method that fishes at three
                        quarters of FMSY (uses perfect information
                        about FMSY)
Fdem                    Demographic FMSY method
Fdem_CC                 Demographic FMSY method using catch-curve
                        analysis to estimate recent Z
Fdem_ML                 Demographic FMSY method that uses mean length
                        data to estimate recent Z
Fleet-class             Class '"Fleet"'
Fratio                  An FMSY/M ratio method
Fratio4010              An FMSY/M ratio method paired with the 40-10
                        rule
Fratio_CC               A data-limited method that uses FMSY/M ratio
                        and a naive catch-curve estimate of recent Z
Fratio_ML               An FMSY/M ratio method that uses a mean length
                        estimator of recent Z
GB_CC                   Geromont and Butterworth Constant Catch Harvest
                        Control Rule
GB_slope                Geromont and Butterworth index slope Harvest
                        Control Rule
GB_target               Geromont and Butterworth target Harvest Control
                        Rule
Gcontrol                G-control harvest control rule
Kplot                   KOBE plot: a projection by projection plot of
                        F/FMSY and B/BMSY
MMHCR                   Mark Maunder's Harvest Control Rule
MSE-class               Class '"MSE"'
Needed                  Data needed to get DLM methods running
OM-class                Class '"OM"'
Observation-class       Class '"Observation"'
Pplot                   A projection by projection plot of F/FMSY and
                        B/BMSY
Rcontrol                Harvest Control Rule using prior for intrinsic
                        rate of increase
Rcontrol2               Harvest Control Rule using prior for intrinsic
                        rate of increase with a quadratic approximation
                        to surplus production
Required                What methods need what data
SBT1                    SBT simple harvest control rule
SBT2                    SBT complex harvest control rule
SPMSY                   Surplus Production MSY method
SPSRA                   Surplus Production Stock Reduction Analysis
SPSRA_ML                Surplus Production Stock Reduction Analysis
                        using a mean-length estimate of current stock
                        depletion
Sam                     Conduct stock assessment
Sense                   Sensitivity analysis
Stock-class             Class '"Stock"'
Tplot                   A trade-off plot for an MSE object
YPR                     Yield Per Recruit analysis to get FMSY proxy
                        F01
YPR_CC                  Yield Per Recruit analysis to get FMSY proxy
                        F01 paired to a naive catch curve estimate of
                        recent Z
YPR_ML                  Yield Per Recruit analysis to get FMSY proxy
                        F01 paired with a mean-length estimate of
                        current stock size
area1MPA                An marine reserve in area 1
avail                   What objects of this class are available
comp                    Comparison plots for individual simulations
getQuota                Calculate quota
getmov                  Optimization function to find a movement model
                        that matches user specified movement
                        characteristics.
getq                    Optimization function that find the
                        catchability (q where F=qE) value required to
                        get to user-specified stock depletion (current
                        biomass / unfished biomass)
initialize-methods      ~~ Methods for Function 'initialize' ~~
lmmodel-class           Class '"lmmodel"'
matsizlim               A data-limited method in which fishing
                        vulnerability is set according to the maturity
                        curve
movfit                  Optimization function that returns the squared
                        difference between user specified and
                        calculated movement parameters.
plot-methods            ~~ Methods for Function 'plot' ~~
qopt                    Internal optimization function that find the
                        catchability (q where F=qE) value required to
                        get to user-specified stock depletion (current
                        biomass / unfished biomass)
replic8                 Enlarge (replicate) a DLM data object to create
                        an additional dimension for simulation /
                        sensitivity testing
runMSE                  Run a Management Strategy Evaluation
summary-methods         ~~ Methods for Function 'summary' ~~
