EcoGenetics-package     Analysis of Phenotypic, Genotypic and
                        Environmental Data
aue.char2num            Converting data coded with characters into data
                        coded by numbers
aue.image2df            Transforming a raster into a data frame with
                        cartesian coordinates
aue.rescale             Scaling a data frame or matrix to 0 - 1 range
aue.sort                Ordering cells in a data frame or matrix
coordinates             Coordinates
eco                     Eco
eco.2columns            Converting a diploid ecogen genetic data frame
                        with two alleles per column into a data frame
                        with one allele per column
eco.2geneland           Creating input data for Geneland with an ecogen
                        object
eco.2genepop            Exporting an ecogen genetic data frame into
                        Genepop format
eco.2gstudio            Converting a diploid ecogen genetic data frame
                        into a gstudio object
eco.2hierfstat          Converting an ecogen genetic data frame into a
                        hierfstat data frame
eco.2spagedi            Exporting an ecogen genetic data frame into
                        SPAGeDI format
eco.NDVI                Generating atmospherically corrected NDVI and
                        MSAVI2 images for temporal series of Landsat 5
                        and 7
eco.NDVI.post           Postprocessing for NDVI and MSAVI 2 temporal
                        series of Landsat 5 and 7
eco.alfreq              Allelic frequency histograms for an ecogen
                        genetic data frame
eco.append              Creating an updated ecogen object by adding
                        results to the slot @OUT
eco.association         Chi-square and Fisher's exact test for
                        association of loci and alleles with a factor
eco.cbind               Combining the columns of two ecogen object
eco.clear               Clearing the working environment, maintaining
                        only the specified objects
eco.cormantel           Mantel and partial Mantel correlograms
eco.correlog            Moran's I, Geary's C and bivariate Moran's Ixy
                        correlograms
eco.detrend             Detrending spatial data with polynomial
                        interpolation
eco.forestplot          Forestplot graphs
eco.gsa                 Global spatial analysis
eco.lagweight           Obtention of a list of spatial weights for
                        classes defined by inter-individual distances
                        or nearest-neighbors
eco.lmtree              Fitting Multiple Linear Regression models by
                        stepwise AIC selection and Multiple
                        Classification and Regression Trees via party
eco.lsa                 Local spatial analysis
eco.mantel              Mantel and partial Mantel tests
eco.merge               Merging two ecogen objects. Ordering the rows
                        of an ecogen object according to the rows of
                        another
eco.order               Ordering the rows of the data frames contained
                        in an ecogen object
eco.pairtest            Kruskall - Wallis + Wilcoxon (Mann-Whitney U)
                        and aov + Tukey-HSD tests for an ecogen object
eco.post.geneland       Log posterior probability plot for Geneland
                        repetitions with fixed K
eco.rankplot            Rankplot graphs
eco.rbind               Combining the rows of two ecogen objects
eco.remove              Creating an updated ecogen object by removing
                        results of the slot @OUT
eco.subset              Subsetting an ecogen object by group
eco.theilsen            Theil-sen regression for a raster time series
eco.variogram           Empirical variogram
eco.weight              Spatial weights
eco2                    Eco2
eco3                    Eco3
ecogen                  Creating a new ecogen object.
environment             environment
genind2ecogen           Conversion between genind and ecogen, and vice
                        versa
genotype                genotype
phenotype               phenotype
structure               structure
summary,eco.mlm-method
                        Summary for eco.lmtree output
summary,ecogen-method   Summary for ecogen objects
tab                     tab
