Package: GlobalFit
Type: Package
Title: Bi-Level Optimization of Metabolic Network Models
Version: 1.0
Date: 2015-04-15
Author: Daniel Hartleb
Maintainer: Daniel Hartleb <daniel.hartleb@hhu.de>
Description: Initial metabolic networks often inaccurately predict in-silico growth or non-growth if compared to in-vivo data. This package refines metabolic network models by making networks changes (i.e., removing, adding, changing reversibility of reactions; adding and removing biomass metabolites) and simultaneously matching sets of experimental growth and non-growth data (e.g., KO-mutants, mutants grown under different media conditions,...)
License: GPL-3
Depends: R (>= 2.12.0), sybil (>= 1.1.7), methods
Suggests: cplexAPI (>= 1.2.1)
NeedsCompilation: no
Packaged: 2015-04-28 12:19:16 UTC; daniel
Repository: CRAN
Date/Publication: 2015-04-29 11:39:02
Built: R 3.1.3; ; 2015-05-11 15:36:44 UTC; unix
