Identifying Functional Polymorphisms

Documentation for package ‘IFP’ version 0.1.2

allele.freq	Allele Frequency Computation from Genotype Data
apoe	Genetic data of APOE gene region
apoe7	Genetic data of APOE gene region
drgegggne	causal models with all possible causal factors: G, GG, GE and E
drgegne	causal models with three possible causal factors: G, G*E and E
drgen	causal models with G*E
drgene	causal models with G*E and E
drggn	causal models with G*G
drgn	causal models with G
error.rates	Error Rates Estimation for Likelihood Ratio Tests Designed for Identifying Number of Functional Polymorphisms
hap.freq	Estimation of Haplotype Frequencies with Two SNPs
iter.mcmc	mcmc inference of causal models with all possible causal factors: G, GG, GE and E
lrt	Likelihood Ratio Tests for Identifying Number of Functional Polymorphisms