MARSS-package	MARSS-package
all.equal.vector	utility_functions
alldefaults	allowed
allowed.methods	allowed
checkMARSSInputs	checkMARSSInputs
checkModelList	checkModelList
coef	coef_marssMLE
coef,marssMLE-method	marssMLE-class
coef.MARSS	coef_marssMLE
coef.marss	coef_marssMLE
coef.marssMLE	coef_marssMLE
convert.model.mat	utility_functions
CSEGriskfigure	CSEGriskfigure
CSEGtmufigure	CSEGtmufigure
describe.marssMODEL	print_marssMODEL
fixed.free.to.formula	utility_functions
graywhales	graywhales
grouse	graywhales
harborSeal	harborSeal
harborSealWA	harborSeal
Imat	utility_functions
is.blockdiag	utility_functions
is.design	utility_functions
is.diagonal	utility_functions
is.equaltri	utility_functions
is.fixed	utility_functions
is.identity	utility_functions
is.marssMLE	is_marssMLE
is.marssMODEL	is_marssMODEL
is.marssMODEL_dfa	is_marssMODEL
is.marssMODEL_marss	is_marssMODEL
is.marssMODEL_marxss	is_marssMODEL
is.solvable	utility_functions
is.validvarcov	utility_functions
is.wholenumber	utility_functions
is.zero	utility_functions
isleRoyal	isleRoyal
ivesDataByWeek	plankton
ivesDataLP	plankton
kem.methods	allowed
kestrel	graywhales
lakeWAplankton	plankton
lakeWAplanktonRaw	plankton
lakeWAplanktonTrans	plankton
loggerhead	loggerhead
loggerheadNoisy	loggerhead
makediag	utility_functions
MARSS	MARSS
MARSS.dfa	MARSS_dfa
MARSS.marxss	MARSS_marxss
MARSSaic	MARSSaic
MARSSapplynames	MARSSapplynames
MARSSboot	MARSSboot
MARSShatyt	MARSShatyt
MARSShessian	MARSShessian
MARSShessian.backtrans	MARSShessian
MARSSinfo	MARSSinfo
MARSSinits	MARSSinits
MARSSinits_dlm	MARSSinits
MARSSinits_marss	MARSSinits
MARSSinits_marxss	MARSSinits
MARSSinnovationsboot	MARSSinnovationsboot
MARSSkem	MARSSkem
MARSSkemcheck	MARSSkemcheck
MARSSkf	MARSSkf
MARSSkfas	MARSSkf
MARSSkfss	MARSSkf
MARSSmcinit	MARSSmcinit
marssMLE	is_marssMLE
marssMLE-class	marssMLE-class
marssMODEL	marssMODEL-class
MARSSoptim	MARSSoptim
MARSSparamCIs	MARSSparamCIs
MARSSsettings	MARSS
MARSSsimulate	MARSSsimulate
MARSSvectorizeparam	MARSSvectorizeparam
marss_to_marxss	as_marssMODEL
marxss_to_marss	as_marssMODEL
matrix.power	utility_functions
mystrsplit	utility_functions
neglogLik	MARSSoptim
okanaganRedds	graywhales
optim.methods	allowed
parmat	utility_functions
pcholinv	utility_functions
pinv	utility_functions
prairiechicken	graywhales
predict	predict_marssMLE
predict,marssMLE-method	marssMLE-class
predict.MARSS	predict_marssMLE
predict.marssMLE	predict_marssMLE
print	print_marssMLE
print,marssMLE-method	marssMLE-class
print,marssMODEL-method	marssMODEL-class
print.MARSS	print_marssMLE
print.marssMLE	print_marssMLE
print.marssMODEL	print_marssMODEL
redstart	graywhales
residuals	residuals_marssMLE
residuals,marssMLE-method	marssMLE-class
residuals.MARSS	residuals_marssMLE
residuals.marss	residuals_marssMLE
residuals.marssMLE	residuals_marssMLE
rockfish	graywhales
rwishart	utility_functions
SalmonSurvCUI	SalmonSurvCUI
simulate,marssMLE-method	marssMLE-class
simulate.marssMLE	MARSSsimulate
stdInnov	stdInnov
sub3D	utility_functions
summary,marssMLE-method	marssMLE-class
summary,marssMODEL-method	marssMODEL-class
takediag	utility_functions
unvec	utility_functions
vec	utility_functions
wilddogs	graywhales
