Armitage                Armitage's trend test for the 2x3 genotype
                        table
Armitage.MCPerm         A Monte Carlo permutation method for Armitage's
                        trend test in case/control association study
Armitage.TradPerm       A permutation method for Armitage's trend test
                        in case/control association study
HW.test                 Hardy-weinberg equilibrium test
I2.MCPerm               Calculate p.value for Heterogeneity statistics
                        I2 in meta analysis
I2.TradPerm             Calculate p.value for Heterogeneity statistics
                        I2 in meta analysis
MCPerm-package          A Monte Carlo permutation method for multiple
                        test correction.
MetaGenotypeCount       rs3131296 genetic association studies from
                        SZGene database
MetaGenotypeData        genotype raw data for rs3131296 genetic
                        association studies
OR                      OR(odd ratio) for risk_allele
OR.MCPerm               A Monte Carlo permutation method for multiple
                        OR(odd ratio) test correction in case/control
                        association study
OR.TradPerm             A permutation test for multiple OR(odd ratio)
                        test correction in case/control association
                        study
PermMeta.Hist           histplot for the result of 'meta.MCPerm' or
                        'meta.TradPerm'
PermMeta.LnOR.CDC       cumulative distribution curve for the return
                        value 'perm_LnOR' of 'meta.MCPerm' or
                        'meta.TradPerm'
PermMeta.LnOR.Hist      histplot for the return value 'perm_LnOR' or
                        'perm_VARLnOR' of 'meta.MCPerm' or
                        'meta.TradPerm'
PermMeta.LnOR.boxplot   boxplot for the return value 'perm_LnOR' or
                        'perm_VARLnOR' of 'meta.MCPerm' or
                        'meta.TradPerm'
PermMeta.LnOR.qqnorm    qqnorm plot for the return value 'perm_LnOR' of
                        'meta.MCPerm' or 'meta.TradPerm'
PermMeta.boxplot        boxplot for the result of 'meta.MCPerm' or
                        'meta.TradPerm'
Q.MCPerm                Correct p.value for Heterogeneity statistics Q
                        in meta analysis by MCPerm method.
Q.TradPerm              Correct p.value for Heterogeneity statistics Q
                        in meta analysis by TradPerm method
VS.Allele.CDC           separately plot cumulative distribution curve
                        for the return value(allele count) of
                        'meta.TradPerm' and 'meta.MCPerm' for certain
                        study
VS.Allele.Hist          separately plot histplot for the return
                        value(allele count) of 'meta.TradPerm' and
                        'meta.MCPerm' for certain study
VS.Allele.QQ            separately plot quantile-quantile plot for the
                        return value(allele count) of 'meta.TradPerm'
                        and 'meta.MCPerm' for certain study
VS.CDC                  plot cumulative distribution curve for the
                        return value of 'meta.TradPerm' and
                        'meta.MCPerm' for certain study or meta
                        analysis
VS.Genotype.CDC         separately plot cumulative distribution curve
                        for the return value(genotype count) of
                        'meta.TradPerm' and 'meta.MCPerm' for certain
                        study
VS.Genotype.Hist        separately plot histplot for the return
                        value(genotype count) of 'meta.TradPerm' and
                        'meta.MCPerm' for certain study
VS.Genotype.QQ          separately plot quantile-quantile plot for the
                        return value(genotype count) of 'meta.TradPerm'
                        and 'meta.MCPerm' for certain study
VS.Hist                 plot histplot for the return value of
                        'meta.TradPerm' and 'meta.MCPerm' for certain
                        study or meta analysis
VS.KS                   Kolmogorov-Smirnov test for the return value of
                        'meta.TradPerm' and 'meta.MCPerm'
VS.QQ                   plot quantile-quantile plot for the return
                        value of 'meta.TradPerm' and 'meta.MCPerm' for
                        certain study or meta analysis.
chisq.MCPerm            A Monte Carlo permutation method for multiple
                        chisq.test correction in case/control
                        association study
chisq.TradPerm          A permutation test for multiple chisq.test
                        correction in case/control association study
fisher.MCPerm           A Monte Carlo permutation method for multiple
                        fisher.test correction in case/control
                        association study
fisher.TradPerm         A permutation test for multiple fisher.test
                        correction in case/control association study
genotypeData            Genotype Data from GWA16
genotypeStat            Statistical Allele and Genotype Frequency of
                        the specified snp
meta                    Meta analysis
meta.MCPerm             Meta analysis corrected by permutation test
meta.TradPerm           Meta analysis corrected by permutation test
pearson_scatter         scatter plot and calculate Pearson correlation
                        coefficient for paired data
permuteGenotype         Permute the elements of genotype data
permuteGenotypeCount    Fill the numerics of 2*3 table when fixed the
                        row and column totals
print.PermMeta          Print style for function 'meta.MCPerm' or
                        'meta.TradPerm'
