Carto3D-class           class "Carto3D"
Carto3D2MRIaggr         Carto3D to MRIaggr converter
EDK                     Gaussian kernel
GRalgo                  Growing Region algorithm
MRIaggr-class           Class "MRIaggr"
MRIaggr-package         Management, display and processing of cerebral
                        imaging data.
MRIaggr.Pat1_red        Example of processed MRIaggr object
allocClinic<-           Allocate clinical data
allocContrast<-         Allocate new contrast parameters
allocDescStats<-        Allocate non standard elements
allocHemisphere<-       Allocate the position of the mid-saggital plan
allocNormalization<-    Allocate normalization values
allocTable<-            Allocate volumic information
array2df                Array to data.frame converter
boxplotMask             Boxplot spatial group characteristics
calcAUPRC               Area under the PR curve
calcBrainMask           Brain-Background discrimination
calcContralateral       Compute contraleral normalization values
calcContro_cpp          Compute contralateral normalization
calcDistMask            Euclidean distance to a spatial group
calcDistTissues         Compute descriptive statistics
calcFilter              Image filtration
calcGR                  Interface to the Growing Region algorithm
calcGroupsCoords        Compute spatial groups
calcGroupsCoords_cpp    Find spatial groups
calcGroupsMask          Compute spatial groups
calcGroupsW             Compute spatial groups
calcGroupsW_cpp         Find spatial groups
calcHemi_cpp            Mid-saggital plan search
calcHemisphere          Find the mid-sagittal plan
calcNormalization       Compute normalization values
calcROCthreshold        ROC analysis
calcRadius_cpp          Compute geometric caracteristics of a spatial
                        group
calcRegionalContrast    Compute regional contrast parameters
calcSmoothMask          Spatial regularization
calcTableHypoReperf     Compute reperfusion and hypoperfusion tables
calcTableLesion         Vertical distribution of the lesion
calcThreshold           Image thresholding
calcTissueType          Probabilistic tissue type segmentation
calcW                   Compute the neighborhood matrix
constCarto3D            Array constructor for Carto3D objects
constCompressMRIaggr    Compress a MRIaggr object
constLatex              Constructor for Latex report
constMRIaggr            Array constructor for MRIaggr object
constReduceMRIaggr      Reduce a MRIaggr
df2array                data.frame to array converter
filtrage2D_cpp          2D filtering
filtrage2Dmed_cpp       2D median filtering
filtrage3D_cpp          3D filtering
filtrage3Dmed_cpp       3D median filtering
heatmapMRIaggr          Correlation between contrast parameters
initCol                 Color initialization
initDirPat_constLatex   Initializateurs for the constLatex function
initDisplayWindow       Device management
initFilter              Initialization of a filter
initGR                  Growing Region initialization
initIndex               Index initialization
initMask                Initialization of the slice numbers
initNeighborhood        Initialization of a neighborhood filter
initNum                 Initialization of the slice numbers
initParameter           parameter initialization
initWindow              Display initialization
legendMRI               Diplay a legend of a contrast map
multiplot               Slice by slice display
outline                 Outline a region on a slice
outlineMRIaggr          Outline a region on a slice
plotDistClass           Plot the distribution of the contrast parameter
plotLesion3D            3D plot of the lesion
plotMRI                 Diplay a contrast parameter by coordinates
plotTableLesion         Lesion volume displayed by slices
pointsHemisphere        Add the position of the mid-sagittal plan
pointsOutline           Compute the outline of a spatial group
readMRI                 Read an image file
selectClinic            Extract clinical data
selectContrast          Extract contrast parameters
selectCoords            Extract spatial coordinates
selectDefault_value     Extract reference values
selectDescStats         Extract non-stardard elements
selectFieldDim          Extract the data dimension
selectHemispheres       Extract the position of the lesion in each
                        hemisphere
selectHistory           Extract the call of the methods applied on the
                        object
selectIdentifier        Extract the identifier
selectMidplane          Extract the position of the mid-sagittal plan
selectN                 Extract the number of observations
selectNormalization     Extract the normalization values
selectParameter         Extract parameters
selectTable             Extract volumic information
selectVoxelDim          Extract the dimensions of a voxel
show,MRIaggr-method     Summary Method for Class "MRIaggr"
supprContrast<-         Remove a contrast parameter
supprDescStats<-        Remove an element of ls_descStats
writeMRI                Write an image file
writeMRIaggr            Write an image file
