Package: cherry
Version: 0.5-10
Date: 2014-07-02
Title: Multiple testing methods for exploratory research
Author: Jelle Goeman, Aldo Solari, Rosa Meijer
Maintainer: Jelle Goeman <jelle.goeman@radboudumc.nl>
Depends: methods, bitops, lpSolve, Matrix
Imports:
Suggests: MASS, multtest, gurobi
Description: This package implements a class of multiple testing
        methods that does not prescribe the user what hypotheses to
        reject, but instead allows the user to select the set of
        selected hypotheses freely. The multiple testing procedure aids
        this selection by providing an upper confidence bound for the
        number of false rejections among the selected set. Because the
        confidence bounds are simultaneous for all possible rejected
        sets, the validity is not compromised by post hoc selection. Some 
	of the functions in this package are optionally enhanced by the gurobi
	software and its accompanying R package. For installation of gurobi, follow the instructions at 
	http://pages.gurobi.com/DownloadRegistration.html?/download/gurobi-optimizer and 
	http://www.gurobi.com/documentation/5.6/quick-start-guide/r_installing_the_r_package.
License: GPL (>= 2)
Collate: closed.R shortcuts.R Meinshausen.R regionmethod.R DAGmethod.R
        DAGstructure.R
LazyLoad: yes
URL: http://www.msbi.nl/goeman
Packaged: 2014-07-18 07:50:21 UTC; Jelle
Repository: CRAN
Date/Publication: 2014-07-18 10:09:13
NeedsCompilation: no
Built: R 3.1.1; ; 2014-07-19 10:51:41 UTC; unix
