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| entropart-package | Entropy Partitioning to Measure Diversity |
| AllenH | Phylogenetic Entropy of a Community |
| AlphaDiversity | Unbiased alpha diversity of a metacommunity |
| AlphaEntropy | Unbiased alpha entropy of a metacommunity |
| as.SimTest | SimTest class |
| bcDiversity | Generalized diversity of a community |
| bcDqz | Similarity-based diversity of a community |
| bcHqz | Similarity-based entropy of a community |
| bcHqzBeta | Similarity-based beta entropy of a community |
| bcPhyloBetaEntropy | Phylogenetic Beta Entropy of a community |
| bcPhyloDiversity | Phylogenetic Diversity of a Community |
| bcPhyloEntropy | Phylogenetic Entropy of a community |
| bcRao | Rao Quadratic Entropy of a Community |
| bcShannon | Shannon entropy of a community |
| bcShannonBeta | Shannon beta entropy of a community |
| bcSimpson | Simpson entropy of a community |
| bcSimpsonBeta | Simpson beta entropy of a community |
| bcTsallis | Tsallis Entropy of a community |
| bcTsallisBeta | Tsallis beta entropy of a community |
| BetaDiversity | Unbiased beta diversity of a metacommunity |
| BetaEntropy | Unbiased beta entropy of a metacommunity |
| ChaoPD | Phylogenetic Diversity of a Community |
| CommunityProfile | Diversity or Entropy Profile of a community |
| Coverage | Sample coverage of a community |
| Diversity | Generalized diversity of a community |
| DivEst | Diversity Estimation of a metacommunity |
| DivPart | Diversity Partition of a metacommunity |
| DivProfile | Diversity Profile of a metacommunity |
| Dqz | Similarity-based diversity of a community |
| EightSpAbundance | Abundances of 8 species to run examples. |
| EightSpTree | Functional tree with 8 species. |
| Enq | Grassberger's expectation of n^q |
| entropart | Entropy Partitioning to Measure Diversity |
| EntropyCI | Entropy of Monte-Carlo simulated communities |
| expq | Exponential of order q |
| GammaDiversity | Unbiased gamma diversity of a metacommunity |
| GammaEntropy | Unbiased gamma entropy of a metacommunity |
| Hqz | Similarity-based entropy of a community |
| HqzBeta | Similarity-based beta entropy of a community |
| is.MCdiversity | Meta-Community diversity class. |
| is.MCentropy | Meta-Community entropy class. |
| is.MetaCommunity | Metacommunity class |
| is.PhyloDiversity | Phylogenetic Diversity of a Community |
| is.PhyloEntropy | Phylogenetic Entropy of a community |
| is.PhyloValue | Phylogenetic entropy of diversity. |
| is.PPtree | Preprocessed Trees. |
| is.SimTest | SimTest class |
| KLq | Generalized Kullback-Leibler divergence |
| lnq | Logarithm of order q |
| MCdiversity | Meta-Community diversity class. |
| MCentropy | Meta-Community entropy class. |
| MergeC | Manipulation of meta-communities |
| MergeMC | Manipulation of meta-communities |
| MetaCommunity | Metacommunity class |
| Originality.Species | Originality of species |
| Paracou618.dist | Functional distances between pairs of species of Paracou field station plots 6 and 18, two 1-ha plots inventoried by the Bridge project. |
| Paracou618.Functional | Functional tree of species of Paracou field station plots 6 and 18, two 1-ha plots inventoried by the Bridge project. |
| Paracou618.MC | Paracou field station plots 6 and 18, two 1-ha plots inventoried by the Bridge project. |
| Paracou618.Taxonomy | Taxonomy (Family - Genus - Species) of Paracou field station plots 6 and 18, two 1-ha plots inventoried by the Bridge project. |
| PDFD | Phylogenetic Diversity / Functional Diversity of a Community |
| PhyloApply | Apply a Function over a Phylogenetic Tree |
| PhyloBetaEntropy | Phylogenetic Beta Entropy of a community |
| PhyloDiversity | Phylogenetic Diversity of a Community |
| PhyloEntropy | Phylogenetic Entropy of a community |
| PhyloValue | Phylogenetic entropy of diversity. |
| plot.DivEst | Diversity Estimation of a metacommunity |
| plot.DivPart | Diversity Partition of a metacommunity |
| plot.DivProfile | Diversity Profile of a metacommunity |
| plot.MCdiversity | Meta-Community diversity class. |
| plot.MCentropy | Meta-Community entropy class. |
| plot.MetaCommunity | Metacommunity class |
| plot.PhyloValue | Phylogenetic entropy of diversity. |
| plot.PPtree | Preprocessed Trees. |
| plot.SimTest | SimTest class |
| PPtree | Preprocessed Trees. |
| Rao | Rao Quadratic Entropy of a Community |
| Richness | Simpson entropy of a community |
| Shannon | Shannon entropy of a community |
| ShannonBeta | Shannon beta entropy of a community |
| ShuffleMC | Manipulation of meta-communities |
| Simpson | Simpson entropy of a community |
| SimpsonBeta | Simpson beta entropy of a community |
| SimTest | SimTest class |
| summary.DivEst | Diversity Estimation of a metacommunity |
| summary.DivPart | Diversity Partition of a metacommunity |
| summary.DivProfile | Diversity Profile of a metacommunity |
| summary.MCdiversity | Meta-Community diversity class. |
| summary.MCentropy | Meta-Community entropy class. |
| summary.MetaCommunity | Metacommunity class |
| summary.PhyloDiversity | Phylogenetic Diversity of a Community |
| summary.PhyloEntropy | Phylogenetic Entropy of a community |
| summary.PhyloValue | Phylogenetic entropy of diversity. |
| summary.SimTest | SimTest class |
| Tsallis | Tsallis Entropy of a community |
| TsallisBeta | Tsallis beta entropy of a community |