Package: epoc
Version: 0.2.5-1
Date: 2013-08-22
Encoding: UTF-8
Title: EPoC (Endogenous Perturbation analysis of Cancer)
Author: Rebecka Jornsten, Tobias Abenius, Sven Nelander
Maintainer: Tobias Abenius <Tobias.Abenius@Chalmers.se>
Depends: R (>= 2.12.0), lassoshooting (>= 0.1.4), Matrix, methods,
        graph
Imports: irr, elasticnet, survival, Rgraphviz
Suggests: RCytoscape
Description: Estimates sparse matrices A or G using fast lasso regression from mRNA transcript levels Y and CNA profiles U. Two models are provided, EPoC A where
      AY + U + R = 0
  and EPoC G where
      Y = GU + E,
  the matrices R and E are so far treated as noise. For details see the reference and the manual page of `lassoshooting'.
License: LGPL-3
Packaged: 2013-08-26 15:37:51 UTC; btobias
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2013-08-26 17:51:58
Built: R 3.1.0; ; 2014-04-18 13:50:07 UTC; unix
