DDX                     Fit Density Dependent Speciation Model to
                        Branching Times
agamids                 Ultrametric Phylogeny of Australian Agamid
                        Lizards
bd                      Fit Rate-Constant Birth-Death Model to
                        Branching Times
birthdeathSim           birthdeathSim
calcLHbd                Calculate Likelihood of Branching Times Under
                        Birth-Death Model
fitSPVAR                Fit model with continuous-time varying
                        speciation/extinction rates to phylogeny
fitdAICrc               Test for Rate Variation Using delta-AICrc Test
                        Statistic
fitdAICrc.batch         Generate Null Distribution of dAICrc
gamStat                 gamStat
getBtimes               Get Branching Times From Parenthetic-Format
                        Tree ('Newick')
getBtimes.batch         Branching Times for Batch of Phylogenies
lambda.crown.ms01       Estimate speciation rates for crown and stem
                        groups
laser-package           LASER
mccrTest                Conduct monte carlo constant rates (gamma
                        statistic) test
plethodon               plethodon
plotLtt                 plotLtt
plotNodeNumbers.phylo   Plot phylogenetic tree with node numbers
plotRate                Plot speciation and extinction rates through
                        time
pureBirth               pureBirth
rtrees50                Random Phylogenetic Trees
scaleBranchingtimes     Scale Branching Times
truncateTree            Truncate a Set of Branching Times
warblers                Branching times from phylogeny of North
                        American Dendroica warblers
yule-n-rate             yule-n-rate
yuleSim                 yuleSim
yuleWindow              Fit Yule Model (Pure Birth) to Temporal Window
                        of Branching Times
