DEoptimLoop             likeLTD::DEoptimLoop
DNA17-db                NGMSelect allele database
Identifiler-db          Identifiler allele database
SGMplus-db              SGMplus allele database
allele.report           likeLTD::allele.report
compatible.genotypes    likeLTD::compatible.genotypes
create.likelihood       likeLTD::create.likelihood
create.likelihood.log   likeLTD::create.likelihood.log
create.likelihood.vectors
                        likeLTD::create.likelihood.vectors
defence.hypothesis      likeLTD::defence.hypothesis
determine.dropout       determine.dropout
evaluate                likeLTD::evaluate
evaluate.from.interim   likeLTD::evaluate.from.interim
get.likely.genotypes    likeLTD::get.likely.genotypes
initial.arguments       likeLTD::initial.arguments
likeLTD                 likeLTD
linkage                 Recombination rates for linked loci
load.allele.database    likeLTD::load.allele.database
locus.likes             likeLTD::locus.likes
objective.function      likeLTD objective functions
optimisation.params     likeLTD::optimisation.params
output.report           likeLTD::output.report
pack.admin.input        likeLTD::pack.admin.input
penalties               likeLTD::penalties
plotLikelihood.2d       likeLTD::plotLikelihood.2d
prosecution.hypothesis
                        likeLTD::prosecution.hypothesis
read.csp.profile        likeLTD::read.csp.profile
read.known.profiles     likeLTD::read.known.profiles
read.unc.profile        likeLTD::read.unc.profile
relistArguments         likeLTD::relistArguments
unitTests.likeLTD       Unit tests for the package likeLTD
