age.apply	age.apply
bar.colors	bar.colors
bootMatrix	bootMatrix
combinatorialSignificance	combinatorialSignificance
DivergenceExpressionSetExample	DivergenceExpressionSetExample
EarlyConservationTest	EarlyConservationTest
ecScore	ecScore
FlatLineTest	FlatLineTest
is.ExpressionSet	is.ExpressionSet
MatchMap	MatchMap
omitMatrix	omitMatrix
PhyloExpressionSetExample	PhyloExpressionSetExample
PlotBarRE	PlotBarRE
PlotCorrelation	PlotCorrelation
PlotDistribution	PlotDistribution
PlotMeans	PlotMeans
PlotPattern	PlotPattern
PlotRE	PlotRE
pMatrix	pMatrix
RE	RE
ReductiveHourglassTest	ReductiveHourglassTest
REMatrix	REMatrix
rhScore	rhScore
TAI	TAI
TDI	TDI
tf	tf
