DEtest                  Differential Expression Testing using Linear
                        Models and Contrasts
customSummarizer        Aggregate Quantified Peptides Values From a
                        Data Frame
esetSummarizer          Aggregate Quantified Peptides Values From an
                        'ExpressionSet'
fillup                  Combine Vectors of Varying Length into a Data
                        Frame
filterNetwork           Filter a Network Based on Identifier
findDenseClusters       Find Dense Clusters in a Network
measureCalc             Calculate Protein Measures for NetWeAvers
                        Algorithm
netweavers-package      NetWeAvers: Weighted Averages for Networks
permTest                Calculate Cluster Permutation _p_-Values and
                        Scores
pvalueSummarizer        Fisher's Method for Multiple Peptides
runNetweavers           Perform the NetWeAvers Algorithm
scoreClusters           Calculate Total Cluster Score for All Clusters
summarizer              Aggregate Quantified Peptides Values
vanHoof                 Van Hoof Dataset
weightCalc              Calculate Weights for NetWeAvers Algorithm
