Csnippet                C code snippets
LondonYorke             Historical childhood disease incidence data
abc                     The ABC algorithm
abc-methods             Methods of the "abc" class
basic.probes            Some probes for partially-observed Markov
                        processes
blowflies               Model for Nicholson's blowflies.
bsmc                    Liu and West Bayesian Particle Filter
bspline.basis           B-spline bases
dacca                   Model of cholera transmission for historic
                        Bengal.
euler.sir               SIR models.
eulermultinom           Euler-multinomial death process
gompertz                Gompertz model with log-normal observations.
logLik,pfilterd.pomp-method
                        Methods of the "pfilterd.pomp" class
logmeanexp              The log-mean-exp trick
mif                     Iterated filtering
mif-methods             Methods of the "mif" class
nlf                     Fit Model to Data Using Nonlinear Forecasting
                        (NLF)
ou2                     Two-dimensional discrete-time
                        Ornstein-Uhlenbeck process
parmat                  Create a matrix of parameters
pfilter                 Particle filter
plugins                 Plug-ins for dynamical models based on
                        stochastic Euler algorithms
pmcmc                   The PMCMC algorithm
pmcmc-methods           Methods of the "pmcmc" class
pomp                    Partially-observed Markov process object.
pomp-methods            Methods of the "pomp" class
pomp-package            Partially-observed Markov processes
pompBuilder             Write, compile, link, and build a pomp object
                        using native codes
pompExample             Pre-built examples of pomp objects.
probe                   Probe a partially-observed Markov process.
probed.pomp-methods     Methods of the "probed.pomp",
                        "probe.matched.pomp", "spect.pomp", and
                        "spect.matched.pomp" classes
profileDesign           Design matrices for likelihood profile
                        calculations.
ricker                  Ricker model with Poisson observations.
rw2                     Two-dimensional random-walk process
sannbox                 Simulated annealing with box constraints.
simulate-pomp           Running simulations of a partially-observed
                        Markov process
sliceDesign             Design matrices for likelihood slices.
sobol                   Sobol' low-discrepancy sequence
spect                   Power spectrum computation for
                        partially-observed Markov processes.
traj.match              Trajectory matching
trajectory              Compute trajectories of the deterministic
                        skeleton.
verhulst                Simple Verhulst-Pearl (logistic) model.
