CHANGES IN VERSION 2.10.0
-------------------------

NEW FEATURES

    o Added support for Description (DS) segment in header program

    o Added support for Supplementary Alignment (0x800) segment in alignment FLAG


SIGNIFICANT USER-VISIBLE CHANGES

    o The functions create.index, load.index and create.idx.batch will
	be deprecated soon and replaced by createIndex, loadIndex and
	createIdxBatch.

BUG FIXES

    o Fixed erroneous FLAG re-setting algorithm

    o Enclosed range2fastq example in "\dontrun{}" in order to avoid
	checking errors (File could not be opened) on OSX snowleopard

    o Replaced rand() by runif() in (samtools) ksort.h
	(due to NOTE in devel CRAN win-builder:
		"Compiled code should not call (...) the C RNG")

CHANGES IN VERSION 2.9.14
-------------------------

NEW FEATURES

    o Included this NEWS file and a ChangeLog file

    o Added test directory (tests are executed on R CMD check)


SIGNIFICANT USER-VISIBLE CHANGES

    o Extended plotAlignDepth function: Option for plotting of exon positions added

BUG FIXES

    o (none)
