bpdata                  Boiling Point Data
cdk.version             Get Current CDK Version
cdkFormula-class        Class cdkFormula, a class for handling
                        molecular formula
do.aromaticity          Perform Aromaticity Detection, atom typing or
                        isotopic configuration
eval.atomic.desc        Evaluate an Atomic Descriptor
eval.desc               Evaluate a Molecular Descriptor
generate.2d.coordinates
                        Generate 2D Coordinates from Connectivity
                        Information
generate.formula        Generate a cdkFormula object.
get.atomic.desc.names   Get the names of the available atomic
                        descriptors
get.atoms               Get the atoms from a molecule or bond
get.bonds               Get the bonds from a molecule
get.connected.atom      Get the atom connected to an atom in a bond
get.desc.categories     Get Descriptor Class Names
get.desc.names          Get Descriptor Class Names
get.exact.mass          Operations on molecules
get.fingerprint         Evaluate Fingerprints
get.formula             Get the formula object from a formula
                        character.
get.isotopes.pattern    Generate the isotope pattern.
get.mol2formula         Parser a molecule to formula object.
get.murcko.fragments    Molecule Fragmentation Methods
get.properties          Get All Property Values of a Molecule
get.property            Get the Value of a Molecule Property
get.smiles              Get the SMILES for a Molecule
get.smiles.parser       Get a SMILES Parser
get.symbol              Operations on atoms
get.total.charge        Get the Total Charges for the Molecule
get.total.hydrogen.count
                        Get the Total Hydrogen Count for a Molecule
get.tpsa                Commonly Used Molecular Descriptors
hasNext                 Does This Iterator Have A Next Element
is.connected            Get the Largest Component in a Disconnected
                        Molecule
isvalid.formula         Validate a cdkFormula object.
load.molecules          Load Molecular Structures From Disk
matches                 Perform Substructure Searching & MCS Detection
parse.smiles            Parse a Vector of SMILES Strings
remove.hydrogens        Remove Hydrogens from a Molecule
remove.property         Remove A Property From a Molecule
set.charge.formula      Set the charge to a cdkFormula object.
set.property            Set A Property On A Molecule
view.molecule.2d        View and Copy 2D Structure Diagrams
view.table              View 2D Structures With Data
write.molecules         Write Molecules To Disk
