additional.linear.constraints
                        Additional Linear Constraints
assign.variables        Assign variables from input file to variable
                        names
diag.panel.hist         define scatterplot diagonal formatting
dirichlet.moments       Calculate the moments of the Dirichlet
                        distribution given the values of vector alpha
filename.clean          Clean up filenames, replacing spaces and bad
                        characters with "_" and "-"
get.data                Get data from Excel spreadsheet
indy.mixture.isotope.mvn.sample
                        Strip out the samples associated with the
                        current mixture
isotope.mvn.sampling    Samples isotope values from the Multivariate
                        Normal Distribution
mcmc.diagnostics        MCMC Diagnostics
model.mass.balance.equation
                        Mass balance equations for converting isotope
                        values to biomass values
model.mass.balance.equation.inverse
                        Inverse Mass balance equations for converting
                        biomass sampled values back to isotope values
numerical.summaries     Numerical summaries
polytope.constraints    Polytope constraints (incorporates both Isotope
                        and Additional linear constraints)
polytope.multiple.samples
                        Defines linear constraints for each sample from
                        the isotope distribution, passed to
                        sample.from.polytope()
prior.on.p              Prior on the vector of source proportions, p,
                        is defined by the given vector alpha
progress.time           returns the time taken since the time started
resample.dirichlet.p    Resamples weighted samples from the polytope
                        from the Dirichlet distribution on the p vector
s.plot.convex.hull      Convex Hull plot
s.plot.convex.hull.titles
                        outside titles Convex Hull matrix plot
s.plot.marginal.histogram
                        Plot marginal histograms
s.plot.scatterplot.sample
                        Scatterplot matrix
s.plot.settings.begin.end
                        Plot settings for all plots
sample.from.polytope    CORE function to draw the samples from the
                        polytope
sisus-package           SISUS: Stable Isotope Sourcing using Sampling
sisus.run               driver program for SISUS
write.Ab                write A matrix and b vector
write.input             Write input values out to a file
write.model.settings    Write model settings to the process log
write.out               write directly to the screen
write.progress          write progress to the screen
