strum-package	strum-package
$,strumData-method	strumData-class
$<-,strumData-method	strumData-class
allRandomEffects	strumVirtualModel-class
allRandomEffects,strumVirtualModel-method	strumVirtualModel-class
allRandomEffects<-	strumVirtualModel-class
allRandomEffects<-,strumVirtualModel-method	strumVirtualModel-class
ascertainment	strumVirtualModel-class
ascertainment,strumVirtualModel-method	strumVirtualModel-class
ascertainment<-	strumVirtualModel-class
ascertainment<-,strumVirtualModel-method	strumVirtualModel-class
coding	strumMarker-class
coding,strumMarker-method	strumMarker-class
coding<-	strumMarker-class
coding<-,strumMarker-method	strumMarker-class
covariatePhenotypes	strumVirtualModel-class
covariatePhenotypes,strumVirtualModel-method	strumVirtualModel-class
createSimModel	createSimModel
createStrumData	createStrumData
createStrumMarker	createStrumMarker
createStrumModel	createStrumModel
dataType	strumData-class
dataType,strumData-method	strumData-class
dataType<-	strumData-class
dataType<-,strumData-method	strumData-class
dataVals	strumData-class
dataVals,strumData-method	strumData-class
dataVals<-	strumData-class
dataVals<-,strumData-method	strumData-class
errorRate	strumMarker-class
errorRate,strumMarker-method	strumMarker-class
errorRate<-	strumMarker-class
errorRate<-,strumMarker-method	strumMarker-class
fittedParameters	strumFittedModel-class
fittedParameters,strumFittedModel-method	strumFittedModel-class
fittedParameters<-	strumFittedModel-class
fittedParameters<-,strumFittedModel-method	strumFittedModel-class
fittedParametersCovMatrix	strumFittedModel-class
fittedParametersCovMatrix,strumFittedModel-method	strumFittedModel-class
fittedParametersCovMatrix<-	strumFittedModel-class
fittedParametersCovMatrix<-,strumFittedModel-method	strumFittedModel-class
formulas	strumVirtualModel-class
formulas,strumVirtualModel-method	strumVirtualModel-class
formulas<-	strumVirtualModel-class
formulas<-,strumVirtualModel-method	strumVirtualModel-class
haplotypes	strumMarker-class
haplotypes,strumMarker-method	strumMarker-class
haplotypes<-	strumMarker-class
haplotypes<-,strumMarker-method	strumMarker-class
ibd	strumData-class
ibd,strumData-method	strumData-class
ibdMarker	strumIBD-class
ibdMarker,strumIBD-method	strumIBD-class
ibdMarker<-	strumIBD-class
ibdMarker<-,strumIBD-method	strumIBD-class
ibdMatrix	strumIBD-class
ibdMatrix,strumIBD-method	strumIBD-class
ibdMatrix<-	strumIBD-class
ibdMatrix<-,strumIBD-method	strumIBD-class
importHapmapData	importHapmapData
importIBD	strumData-class
importIBD,strumData-method	strumData-class
intervalIBD	strumMarker-class
intervalIBD,strumMarker-method	strumMarker-class
intervalIBD<-	strumMarker-class
intervalIBD<-,strumMarker-method	strumMarker-class
markerFacts	strumMarker-class
markerFacts,strumMarker-method	strumMarker-class
markerFacts<-	strumMarker-class
markerFacts<-,strumMarker-method	strumMarker-class
markerInfo	strumSimModel-class
markerInfo,strumSimModel-method	strumSimModel-class
markerInfo<-	strumSimModel-class
markerInfo<-,strumSimModel-method	strumSimModel-class
missingRate	strumMarker-class
missingRate,strumMarker-method	strumMarker-class
missingRate<-	strumMarker-class
missingRate<-,strumMarker-method	strumMarker-class
mutationRate	strumMarker-class
mutationRate,strumMarker-method	strumMarker-class
mutationRate<-	strumMarker-class
mutationRate<-,strumMarker-method	strumMarker-class
paramNames	strumVirtualModel-class
paramNames,strumVirtualModel-method	strumVirtualModel-class
paramNames<-	strumVirtualModel-class
paramNames<-,strumVirtualModel-method	strumVirtualModel-class
phi	strumData-class
phi,strumData-method	strumData-class
phi<-	strumData-class
phi<-,strumData-method	strumData-class
plot,strumModel-method	strumModel-class
plot,strumSimModel-method	strumSimModel-class
plot,strumVirtualModel-method	strumVirtualModel-class
populationRecombRate	strumMarker-class
populationRecombRate,strumMarker-method	strumMarker-class
populationRecombRate<-	strumMarker-class
populationRecombRate<-,strumMarker-method	strumMarker-class
returnIBD	strumMarker-class
returnIBD,strumMarker-method	strumMarker-class
returnIBD<-	strumMarker-class
returnIBD<-,strumMarker-method	strumMarker-class
show,strumData-method	strumData-class
show,strumFittedModel-method	strumFittedModel-class
show,strumIBD-method	strumIBD-class
show,strumMarker-method	strumMarker-class
show,strumModel-method	strumModel-class
show,strumSimModel-method	strumSimModel-class
show,strumVirtualModel-method	strumVirtualModel-class
simulateStrumData	simulateStrumData
strum	strum
strumData-class	strumData-class
strumFittedModel-class	strumFittedModel-class
strumIBD-class	strumIBD-class
strumMarker-class	strumMarker-class
strumModel-class	strumModel-class
strumSimModel-class	strumSimModel-class
strumVirtualModel-class	strumVirtualModel-class
traitMissingRate	strumSimModel-class
traitMissingRate,strumSimModel-method	strumSimModel-class
traitMissingRate<-	strumSimModel-class
traitMissingRate<-,strumSimModel-method	strumSimModel-class
varList	strumVirtualModel-class
varList,strumVirtualModel-method	strumVirtualModel-class
varList<-	strumVirtualModel-class
varList<-,strumVirtualModel-method	strumVirtualModel-class
[,strumData,ANY,ANY,ANY-method	strumData-class
[<-,strumData,ANY,ANY,ANY-method	strumData-class
[[,strumData-method	strumData-class
[[<-,strumData-method	strumData-class
