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| axion.elec.name.to.xy | axion.elec.name.to.xy |
| axion.elec2well | Extract well name from electrode name |
| axion.electrodes.on.well | axion.electrodes.on.well |
| axion.guess.well.number | axion.guess.well.number |
| axion.spikestodf | axion.spikestodf |
| axion.spikesum | axion.spikesum |
| axion.spikesum2 | axion.spikesum2 |
| burstinfo | get burst feature information |
| calc.burst.summary | Calculate average and standard deviation of the bursting features. |
| calculate.isis | Calculate inter spike intervals |
| calculate.network.bursts | Compute network bursts for a list of MEA recordings. |
| calculate.network.spikes | Compute the netwrok spikes statistics from spike lists. |
| chem.info.2 | chem.info.2 |
| construct.s | construct.s |
| filter.wells | Filter wells |
| get.array.info | get.array.info |
| get.data | get.data |
| get.file.basename | get.file.basename |
| get.num.AE | get.num.AE |
| get.project.plate.name | get.project.plate.name |
| get.wt | Get WT |
| has.network.spikes | A utility function to check if network spikes are detected. |
| IGM.aggregate.feature.data | Aggregate Feature Data |
| IGM.mean.firingrate.by.well | mean.firingrate.by.well |
| IGM.plot.active.wells.network.spikes | plot.active.wells.network.spikes |
| IGM.plot.distributions | calculate and plot burst featues distributions |
| IGM.plot.mean.firingrate.by.eletrode.by.div | plot.mean.firingrate.by.eletrode.by.div |
| IGM.plot.mean.firingrate.by.well.by.div | plot.mean.firingrate.by.well.by.div |
| IGM.plot.ns | Generic method for plotting network spikes. |
| IGM.plot.plate.summary.for.bursts | Plot burst features |
| IGM.plot.plate.summary.for.spikes | plot.plate.summary.for.spikes |
| IGM.summary.network.spikes | Generate network spikes based features. |
| IGM.write.UI.to.log | IGM.write.UI.to.log |
| IGM.xyplot.network.spikes | xyplot for network spikes at the plate level. |
| isi | isi |
| make.raster | make.raster |
| mi.find.bursts | Find bursts |
| NB.matrix.to.feature.dfs | Convert network burst data matrix to a list of data frames. |
| parameters | A list of parameters with default values that user can customize. |
| plateinfo | Retrieve plate information |
| remove.spikes | remove.spikes |
| S | example 'S' object |
| write.csv.network.spikes | Summarize and write netowrk spikes features into a csv file. |
| write.features.to.files | Write feature data to an output file |
| write.pdf | Write PDF |
| write.plate.summary.for.bursts | Prints bursting features |
| write.plate.summary.for.spikes | write.plate.summary.for.spikes |