Bayesian Model Averaging using Bayesian Adaptive Sampling

Documentation for package ‘BAS’ version 1.0.9

DESCRIPTION file.
User guides, package vignettes and other documentation.
Code demos. Use demo() to run them.

Help Pages

BAS-package	Bayesian Model Averaging using Bayesian Adaptive Sampling
AIC.prior	Information Criterion Families of Prior Distribution for Coefficients in BMA Models
aic.prior	Information Criterion Families of Prior Distribution for Coefficients in BMA Models
BAS	Bayesian Model Averaging using Bayesian Adaptive Sampling
bas	Bayesian Adaptive Sampling Without Replacement for Variable Selection in Linear Models
bas.glm	Bayesian Adaptive Sampling Without Replacement for Variable Selection in Generalized Linear Models
bas.lm	Bayesian Adaptive Sampling Without Replacement for Variable Selection in Linear Models
bayesglm.fit	Fitting Generalized Linear Models and Bayesian marginal likelihood evaluation
Bernoulli	Independent Bernoulli Prior Distribution for Models
bernoulli	Independent Bernoulli Prior Distribution for Models
Beta.Binomial	Beta-Binomial Prior Distribution for Models
beta.binomial	Beta-Binomial Prior Distribution for Models
beta.prime	Beta-Prime Prior Distribution for Coefficients in BMA Model
BIC.prior	Information Criterion Families of Prior Distribution for Coefficients in BMA Models
bic.prior	Information Criterion Families of Prior Distribution for Coefficients in BMA Models
bin2int	Convert binary model representation into an integer
CCH	Generalized g-Prior Distribution for Coefficients in BMA Models
coef	Coefficients of a Bayesian Model Average object
coef.bma	Coefficients of a Bayesian Model Average object
coefficients	Coefficients of a Bayesian Model Average object
coefficients.bma	Coefficients of a Bayesian Model Average object
cv.summary.bma	Summaries for Out of Sample Prediction
EB	Empirical Bayes Prior Distribution for Coefficients in BMA Model
EB.global	Finds the global Empirical Bayes estimates for BMA
EB.global.bma	Finds the global Empirical Bayes estimates for BMA
EB.local	Empirical Bayes Prior Distribution for Coefficients in BMA Model
eplogprob	eplogprob - Compute approximate marginal inclusion probabilities from pvalues
eplogprob.marg	eplogprob.marg - Compute approximate marginal inclusion probabilities from pvalues
fitted	Fitted values for a BAS BMA objects
fitted.bas	Fitted values for a BAS BMA objects
g.prior	Families of G-Prior Distribution for Coefficients in BMA Models
Hald	Hald Data
hald	Hald Data
hyper.g	Hyper-g-Prior Distribution for Coefficients in BMA Models
hyper.g.n	Generalized hyper-g/n Prior Distribution for g for mixtures of g-priors on Coefficients in BMA Models
hypergeometric1F1	Confluent hypergeometric2F1 function
hypergeometric2F1	Gaussian hypergeometric2F1 function
IC.prior	Information Criterion Families of Prior Distribution for Coefficients in BMA Models
image	Images of models used in Bayesian model averaging
image.bma	Images of models used in Bayesian model averaging
intrinsic	Intrinsic Prior Distribution for Coefficients in BMA Models
Jeffreys	Jeffreys Prior Distribution for $g$ for Mixtures of g-Priors for Coefficients in BMA Models
list2matrix.bma	Coerce a BMA list object into a matrix
list2matrix.which	Coerce a BMA list object into a matrix
phi1	Compound Confluent hypergeometric function of two variables
plot	Plots the posterior distributions of coefficients derived from Bayesian model averaging
plot.bma	Plot Diagnostics for an blm Object
plot.coef.bma	Plots the posterior distributions of coefficients derived from Bayesian model averaging
predict	Prediction Method for an object of class BMA
predict.bas	Prediction Method for an object of class BMA
predict.basglm	Prediction Method for an object of class basglm
print	Summaries of Bayesian Model Averaging objects from BAS
print.bas	Summaries of Bayesian Model Averaging objects from BAS
print.coef.bma	Coefficients of a Bayesian Model Average object
protein	Protein Activity Data
robust	Robust-Prior Distribution for Coefficients in BMA Model
summary	Summaries of Bayesian Model Averaging objects from BAS
summary.bas	Summaries of Bayesian Model Averaging objects from BAS
tCCH	Generalized tCCH g-Prior Distribution for Coefficients in BMA Models
TG	Generalized g-Prior Distribution for Coefficients in BMA Models
Uniform	Uniform Prior Distribution for Models
uniform	Uniform Prior Distribution for Models
update	Update BMA object using a new prior
update.bma	Update BMA object using a new prior
which.matrix	Coerce a BMA list object into a matrix