| ACGaussian | Albert and Chib algorithm with Gaussian distribution for latent variable |
| ACt | Albert and Chib algorithm with t-Student distribution for latent variable |
| Bayes.factor | Bayes factor of the two models |
| Bayesthresh | Bayesian thresholds mixed-effects models for categorical data |
| coef.Bayesthresh | Coefficients for the fixed effects model |
| compVar | Variance component estimates |
| MCGaussian | Kizilkaya et. al. (2003) algorithm with Gaussian distribution for latent variable |
| MCMCsample | MCMC sample |
| MCt | Kizilkaya et. al. (2003) algorithm using Student's "t" distribution as link function |
| NCGaussian | Nandram and Chen (1996) algorithm with Gaussian distribution for latent variable |
| NCt | Nandram and Chen (1996) algorithm with t-Student distribution for latent variable |
| plot.random.effects | Plot random effects of model |
| predict.Bayesthresh | Extract the predict values |
| random.effects | Extract the random effects of the model |
| sensory | Sensory analysis of banana |
| summary.Bayesthresh | Summary |