| RepeatABEL-package | GWAS for repeated observations on related individuals |
| compute.GRM | Computes a Genetic Relationship Matrix from a GenABEL object |
| constructV | Constructs the (co)variance matrix for y |
| Create_gwaa_scan | Creates a scan.gwaa object |
| flycatchers | 10,000 SNPs from 849 collared flycatchers |
| gen.data | Example GenABEL data |
| Phen.Data | Example phenotype data |
| preFitModel | Fits a linear mixed model (without fixed SNP effects) and computes the fitted variance-covariance matrix for later use in the rGLS function. |
| RepeatABEL | GWAS for repeated observations on related individuals |
| rGLS | GWAS for Studies having Repeated Measurements on Related Individuals |
| simulate_PhenData | Simulation function for the RepeatABEL package. |
| SmoothSNPmatrix | Imputes column means to missing genotypes |
| thinned.flycatchers | 10,000 SNPs from 200 collared flycatchers |