| colifCount | Coliform counts in sea-water samples |
| fitted.hmm.discnp | Fitted values of a discrete non-parametric hidden Markov model. |
| hmm | Fit a hidden Markov model to discrete data. |
| lesionCount | Multiple sclerosis lesion counts for three patients. |
| logLikHmm | Log likelihood of a hidden Markov model |
| mps | Most probable states. |
| pr | Probability of state sequences. |
| sim.hmm | Simulate discrete data from a hidden Markov model. |
| sp | Calculate the conditional state probabilities. |
| viterbi | Most probable state sequence. |