| onemap-package | Software for constructing genetic maps |
| add.marker | Add or Drop Markers From a Sequence |
| add_drop | Add or Drop Markers From a Sequence |
| compare | Compare all possible orders (exhaustive search) for a given sequence of markers |
| def.rf.3pts | Three-point analysis of genetic markers |
| draw.map | Draw a genetic map |
| drop.marker | Add or Drop Markers From a Sequence |
| example.out | Data from a full-sib family derived from two outbred parents |
| fake.bc.onemap | Simulated data from a backcross population |
| fake.f2.onemap | Simulated data from a F2 population |
| group | Assign markers to linkage groups |
| haldane | Mapping functions Haldane and Kosambi |
| kosambi | Mapping functions Haldane and Kosambi |
| make.seq | Create a sequence of markers |
| map | Construct the linkage map for a sequence of markers |
| map_func | Mapping functions Haldane and Kosambi |
| marker.type | Informs the segregation patterns of markers |
| onemap | Software for constructing genetic maps |
| order.seq | Search for the best order of markers combining compare and try.seq functions |
| print.group | Assign markers to linkage groups |
| print.rf.2pts | Two-point analysis between genetic markers |
| print.try | Try to map a marker into every possible position between markers |
| rcd | Rapid Chain Delineation |
| read.mapmaker | Read data from a Mapmaker raw file |
| read.outcross | Read data from a segregating full-sib population |
| record | Recombination Counting and Ordering |
| rf.2pts | Two-point analysis between genetic markers |
| rf.graph.table | Plots pairwise recombination fractions and LOD Scores using a color scale. |
| ripple.seq | Compares and displays plausible alternative orders for a given linkage group |
| seriation | Seriation |
| set.map.fun | Defines the default mapping function |
| try.seq | Try to map a marker into every possible position between markers |
| ug | Unidirectional Growth |
| write.map | Write a genetic map to a file |