A C D E G I L M N O P Q R S T U V
| rstan-package | RStan - R interface to Stan |
| as.array.stanfit | Create array, matrix, or data.frame objects from samples in a 'stanfit' object |
| as.data.frame.stanfit | Create array, matrix, or data.frame objects from samples in a 'stanfit' object |
| as.matrix.stanfit | Create array, matrix, or data.frame objects from samples in a 'stanfit' object |
| As.mcmc.list | Class 'stanfit': fitted Stan model |
| constrain_pars | model's 'log_prob' and 'grad_log_prob' functions |
| constrain_pars-method | model's 'log_prob' and 'grad_log_prob' functions |
| dim.stanfit | Create array, matrix, or data.frame objects from samples in a 'stanfit' object |
| dimnames.stanfit | Create array, matrix, or data.frame objects from samples in a 'stanfit' object |
| expose_stan_functions | Expose user-defined Stan functions to R for testing and simulation |
| extract | 'extract': extract samples from fitted Stan model |
| extract-method | 'extract': extract samples from fitted Stan model |
| extract-methods | 'extract': extract samples from fitted Stan model |
| extract_sparse_parts | Extract the compressed representation of a sparse matrix |
| get_adaptation_info | Class 'stanfit': fitted Stan model |
| get_adaptation_info-method | Class 'stanfit': fitted Stan model |
| get_cppcode | Class representing model compiled from C++ |
| get_cppcode-method | Class representing model compiled from C++ |
| get_cppo_mode | Class 'stanfit': fitted Stan model |
| get_cppo_mode-method | Class 'stanfit': fitted Stan model |
| get_cxxflags | Class representing model compiled from C++ |
| get_cxxflags-method | Class representing model compiled from C++ |
| get_elapsed_time | Class 'stanfit': fitted Stan model |
| get_elapsed_time-method | Class 'stanfit': fitted Stan model |
| get_inits | Class 'stanfit': fitted Stan model |
| get_inits-method | Class 'stanfit': fitted Stan model |
| get_logposterior | Class 'stanfit': fitted Stan model |
| get_logposterior-method | Class 'stanfit': fitted Stan model |
| get_num_upars | model's 'log_prob' and 'grad_log_prob' functions |
| get_num_upars-method | model's 'log_prob' and 'grad_log_prob' functions |
| get_posterior_mean | Class 'stanfit': fitted Stan model |
| get_posterior_mean-method | Class 'stanfit': fitted Stan model |
| get_sampler_params | Class 'stanfit': fitted Stan model |
| get_sampler_params-method | Class 'stanfit': fitted Stan model |
| get_seed | Class 'stanfit': fitted Stan model |
| get_seed-method | Class 'stanfit': fitted Stan model |
| get_seeds | Class 'stanfit': fitted Stan model |
| get_seeds-method | Class 'stanfit': fitted Stan model |
| get_stancode | Class 'stanfit': fitted Stan model |
| get_stancode-method | Class 'stanfit': fitted Stan model |
| get_stanmodel | Class 'stanfit': fitted Stan model |
| get_stanmodel-method | Class 'stanfit': fitted Stan model |
| grad_log_prob | model's 'log_prob' and 'grad_log_prob' functions |
| grad_log_prob-method | model's 'log_prob' and 'grad_log_prob' functions |
| is.array.stanfit | Create array, matrix, or data.frame objects from samples in a 'stanfit' object |
| log_prob | model's 'log_prob' and 'grad_log_prob' functions |
| log_prob-method | model's 'log_prob' and 'grad_log_prob' functions |
| log_prob-methods | model's 'log_prob' and 'grad_log_prob' functions |
| lookup | Look up the Stan function that corresponds to a R function or name. |
| makeconf_path | Obtain the full path of file 'Makeconf' |
| monitor | Compute the summary for MCMC simulation samples and monitor the convergence |
| names.stanfit | Create array, matrix, or data.frame objects from samples in a 'stanfit' object |
| names<-.stanfit | Create array, matrix, or data.frame objects from samples in a 'stanfit' object |
| optimizing | 'optimizing': obtain a point estimate by maximizing the joint posterior |
| optimizing-method | 'optimizing': obtain a point estimate by maximizing the joint posterior |
| optimizing-methods | 'optimizing': obtain a point estimate by maximizing the joint posterior |
| pairs.stanfit | Create a matrix of output plots from a 'stanfit' object |
| plot-method | Plots for stanfit objects |
| plot-methods | Plots for stanfit objects |
| plotting-functions | RStan Plotting Functions |
| print.stanfit | Print a summary for a fitted model represented by a 'stanfit' object |
| quietgg | ggplot2 for RStan |
| read_rdump | Read data in an R dump file to a list |
| read_stan_csv | Read CSV files of samples generated by (R)Stan into a 'stanfit' object |
| rstan | RStan - R interface to Stan |
| rstan.package.skeleton | Create a Skeleton for a New Source Package with Stan Programs |
| rstan_ggtheme_options | Set default appearance options |
| rstan_gg_options | Set default appearance options |
| rstan_options | Set and read options used in RStan |
| sampling | 'sampling': draw samples from Stan model |
| sampling-method | 'sampling': draw samples from Stan model |
| sampling-methods | 'sampling': draw samples from Stan model |
| set_cppo | Defunct function to set the compiler optimization level |
| sflist2stanfit | Merge a list of stanfit objects into one |
| show-method | Class 'stanfit': fitted Stan model |
| show-method | Class representing model compiled from C++ |
| stan | Fit a model using Stan |
| stanc | Translate Stan model specification to C++ code |
| stanc_builder | Translate Stan model specification to C++ code |
| stanfit-class | Class 'stanfit': fitted Stan model |
| stanmodel-class | Class representing model compiled from C++ |
| stan_ac | ggplot2 for RStan |
| stan_demo | Demonstrate examples included in Stan |
| stan_dens | ggplot2 for RStan |
| stan_diag | Diagnostic plots |
| stan_ess | Diagnostic plots |
| stan_hist | ggplot2 for RStan |
| stan_mcse | Diagnostic plots |
| stan_model | Construct a Stan model |
| stan_par | Diagnostic plots |
| stan_plot | ggplot2 for RStan |
| stan_rdump | Dump the data for a Stan model to R dump file in the limited format that Stan can read. |
| stan_rhat | Diagnostic plots |
| stan_scat | ggplot2 for RStan |
| stan_trace | ggplot2 for RStan |
| stan_version | Obtain the version of Stan |
| summary-method | Class 'stanfit': fitted Stan model |
| traceplot | 'traceplot': draw the traces of the sample |
| traceplot-method | 'traceplot': draw the traces of the sample |
| unconstrain_pars | model's 'log_prob' and 'grad_log_prob' functions |
| unconstrain_pars-method | model's 'log_prob' and 'grad_log_prob' functions |
| vb | Run Stan's Variational Algorithm for Approximate Posterior Sampling |
| vb-method | Run Stan's Variational Algorithm for Approximate Posterior Sampling |
| vb-methods | Run Stan's Variational Algorithm for Approximate Posterior Sampling |