Variational inference for Bayesian variable selection

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Documentation for package ‘varbvs’ version 1.0

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varbvs-package Variational inference for Bayesian variable selection
create.data Simulate SNP data
create.snps Generate SNP Info
grid3d Generates possible combinations of 3 variables
updatestats Statistics for updating variational parameters 'eta'.
varbvs Variational inference for Bayesian variable selection
varbvsbinoptimize Coordinate ascent for variational approximation to Bayesian variable selection in logistic regression
varbvsbinupdate Coordinate ascent for variational approximation to Bayesian variable selection in logistic regression
varbvsoptimize Coordinate ascent for variational approximation to Bayesian variable selection in linear regression
varbvsupdate Coordinate ascent for variational approximation to Bayesian variable selection in linear regression
varsimbvs Full inference procedure for Bayesian variable selection in linear regression