![[R logo]](../../../doc/html/logo.jpg)
| colTDT | Genotypic TDT |
| colTDT2way | Genotypic TDT for Two-Way Interactions |
| colTDTinter2way | Genotypic TDT for Two-Way Interactions |
| compPermTDT2way | Permutation-Based gTDT for Two-Way Interactions |
| findLDblocks | Identifying LD blocks |
| freq.hap | Examples for Haplotype Frequencies for Simulation |
| getLD | Computation of LD Measures |
| LDdata | Simulated LD Block Data |
| mat | Computation of LD Measures |
| ped2geno | Transformation of Ped-File |
| plot.getLD | Plotting a getLD Object |
| plot.LDblocks | Plotting a LDblock Object |
| print.colTDT | Genotypic TDT |
| print.colTDTepi | Genotypic TDT for Two-Way Interactions |
| print.LDblock | Identifying LD blocks |
| print.tdt | Genotypic TDT |
| print.tdtEpi | Genotypic TDT for Two-Way Interactions |
| read.pedfile | Reading a Ped File |
| simuBkMap | Examples for Haplotype Frequencies for Simulation |
| step3way | Examples for Haplotype Frequencies for Simulation |
| tdt | Genotypic TDT |
| tdt2way | Genotypic TDT for Two-Way Interactions |
| trio | Generate Trio Data Format Suitable for Trio Logic Regression |
| trio.check | Check Case-Parent Trio Data for Mendelian Errors |
| trio.gen.err | Genotype Data for Trios |
| trio.gen1 | Genotype Data for Trios |
| trio.gen2 | Genotype Data for Trios |
| trio.ped.err | Genotype Data for Trios |
| trio.ped1 | Genotype Data for Trios |
| trio.ped2 | Genotype Data for Trios |
| trio.sim | Simulate Case-Parent Trios with Population Disease Risk Dependent on SNP-SNP Interaction |