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A B C D E G H I K L M N O P Q R S T U V
| %*% | inner product for matrices and vectors |
| %*%.acomp | inner product for datasets with a vector space structure |
| %*%.aplus | inner product for datasets with a vector space structure |
| %*%.default | inner product for matrices and vectors |
| %*%.rmult | inner product for datasets with vector scale |
| *.acomp | Power transform in Aitchisons simplex |
| *.aplus | vectorial arithmetic for datasets with aplus class |
| *.rcomp | Arithmetic operations for composition in real geometry |
| *.rmult | vectorial arithmetic for datasets in a classical vector scale |
| *.rplus | Arithmetik of rplus-scale |
| +.acomp | Perturbation of compositions |
| +.aplus | vectorial arithmetic for datasets with aplus class |
| +.rcomp | Arithmetic operations for composition in real geometry |
| +.rmult | vectorial arithmetic for datasets in a classical vector scale |
| +.rplus | Arithmetik of rplus-scale |
| -.acomp | Perturbation of compositions |
| -.aplus | vectorial arithmetic for datasets with aplus class |
| -.rcomp | Arithmetic operations for composition in real geometry |
| -.rmult | vectorial arithmetic for datasets in a classical vector scale |
| -.rplus | Arithmetik of rplus-scale |
| /.acomp | Power transform in Aitchisons simplex |
| /.aplus | vectorial arithmetic for datasets with aplus class |
| /.rcomp | Arithmetic operations for composition in real geometry |
| /.rmult | vectorial arithmetic for datasets in a classical vector scale |
| /.rplus | Arithmetik of rplus-scale |
| acomp | Aitchison compositions |
| acompmargin | Marginal compositions in Aitchison Compositions |
| alr | Additive log ratio transform |
| aplus | Amounts analysed in log-scale |
| apt | Additive planar transform |
| as.data.frame.acomp | Convert "compositions" classes to data frames |
| as.data.frame.aplus | Convert "compositions" classes to data frames |
| as.data.frame.rcomp | Convert "compositions" classes to data frames |
| as.data.frame.rmult | Convert "compositions" classes to data frames |
| as.data.frame.rplus | Convert "compositions" classes to data frames |
| barplot.acomp | Barcharts of amounts |
| barplot.aplus | Barcharts of amounts |
| barplot.rcomp | Barcharts of amounts |
| barplot.rplus | Barcharts of amounts |
| boxplot.acomp | Displaying compositions and amounts by boxplots |
| boxplot.aplus | Displaying compositions and amounts by boxplots |
| boxplot.rcomp | Displaying compositions and amounts by boxplots |
| boxplot.rplus | Displaying compositions and amounts by boxplots |
| cdt | Centered default transform |
| clo | Closure of a composition |
| clr | Centered log ratio transform |
| clr2ilr | Convert between clr and ilr, and between cpt and ipt. Acts in vectors and in bilinear forms. |
| clrvar2ilr | Convert between clr and ilr, and between cpt and ipt. Acts in vectors and in bilinear forms. |
| convex.rcomp | Arithmetic operations for composition in real geometry |
| cor | Correlations of amounts and compositions |
| cov | Variances and covariances of amounts and compositions |
| cpt | Centered planar transform |
| dist | Distances in variouse approaches |
| dlnorm.rplus | The multivariate lognormal distribution |
| dnorm.acomp | Normal distributions on special spaces |
| dnorm.aplus | Normal distributions on special spaces |
| dnorm.rmult | Normal distributions on special spaces |
| ellipses | Draw ellipses |
| endpointCoordinates | Amounts in barytic-coordinates |
| endpointCoordinatesInv | Amounts in barytic-coordinates |
| geometricmean | The geometric mean |
| groupparts | Group amounts of parts |
| gsi | Internal functions of the compositions package |
| gsi.add | Internal functions: Parallel operations of single and multiple datasets |
| gsi.add2pairs | Internal functions of the compositions package |
| gsi.addclass | Internal function: give an object a derived subclass |
| gsi.call | Internal functions of the compositions package |
| gsi.closespread | Internal functions of the compositions package |
| gsi.coorInfo | Internal functions of the compositions package |
| gsi.diagExtract | Internal functions: Get the diagonal of a matrix |
| gsi.diagGenerate | Internal functions: Generate a diagonal matrix |
| gsi.div | Internal functions: Parallel operations of single and multiple datasets |
| gsi.drop | Internal functions: A conditional drop |
| gsi.eps | Internal variable: Negligible differences |
| gsi.expandrcomp | Internal function: Scaling rcomp |
| gsi.getCoorInfo | Internal functions of the compositions package |
| gsi.getD | Interal function: Get number of samples and number of parts in a compositional object |
| gsi.getN | Interal function: Get number of samples and number of parts in a compositional object |
| gsi.ilrBase | The canonical basis in the clr plane used for ilr and ipt transforms. |
| gsi.isSingleRow | Internal function: Can something be considered as a single multivariate data item? |
| gsi.mapfrom01 | Internal functions: Storing integers as reals |
| gsi.mapin01 | Internal functions: Storing integers as reals |
| gsi.mapmax | Internal functions: Storing integers as reals |
| gsi.mapmin | Internal functions: Storing integers as reals |
| gsi.margin | Internal function: Compute a desired compositional margin |
| gsi.mul | Internal functions: Parallel operations of single and multiple datasets |
| gsi.pairrelativeMatrix | Internal functions of the compositions package |
| gsi.pairs | Internal functions of the compositions package |
| gsi.plain | Internal function: Convert to plain vector or matrix |
| gsi.plotmargin | Internal functions of the compositions package |
| gsi.plots | Internal functions of the compositions package |
| gsi.setCoorInfo | Internal functions of the compositions package |
| gsi.simshape | Internal function: Reshape an object to the shape type of another |
| gsi.spreadToIsoSpace | Internal functions of the compositions package |
| gsi.sub | Internal functions: Parallel operations of single and multiple datasets |
| gsi.textpanel | Internal function: A panel displaying a label only |
| gsi2.invperm | Internal function: Invert a permutation |
| Hydrochem | Hydrochemical composition data set of Llobregat river basin water (NE Spain) |
| idt | Isometric default transform |
| iit | Isometric identity transform |
| ilr | Isometric log ratio transform |
| ilr2clr | Convert between clr and ilr, and between cpt and ipt. Acts in vectors and in bilinear forms. |
| ilrBase | The canonical basis in the clr plane used for ilr and ipt transforms. |
| ilrBaseList | The canonical basis in the clr plane used for ilr and ipt transforms. |
| ilrvar2clr | Convert between clr and ilr, and between cpt and ipt. Acts in vectors and in bilinear forms. |
| ilt | Isometric log transform |
| ipt | Isometric planar transform |
| is.acomp | Check for compositional data type |
| is.aplus | Check for compositional data type |
| is.rcomp | Check for compositional data type |
| is.rmult | Check for compositional data type |
| is.rplus | Check for compositional data type |
| isoPortionLines | Isoportion- and Isoproportion-lines |
| isoProportionLines | Isoportion- and Isoproportion-lines |
| Kappa | Uncentered log transform |
| kingTetrahedron | Ploting composition into rotatable tetrahedron |
| lines.acomp | Draws connected lines from point to point. |
| lines.aplus | Draws connected lines from point to point. |
| lines.rcomp | Draws connected lines from point to point. |
| lines.rmult | Draws connected lines from point to point. |
| lines.rplus | Draws connected lines from point to point. |
| mcor | Metric summary statistics of real, amount or compositional data |
| mcov | Metric summary statistics of real, amount or compositional data |
| mean.acomp | Mean amounts and mean compositions |
| mean.aplus | Mean amounts and mean compositions |
| mean.col | The arithmetic mean of rows or columns |
| mean.rcomp | Mean amounts and mean compositions |
| mean.rmult | Mean amounts and mean compositions |
| mean.row | The arithmetic mean of rows or columns |
| mean.rplus | Mean amounts and mean compositions |
| msd | Metric summary statistics of real, amount or compositional data |
| mul.rplus | Arithmetik of rplus-scale |
| mvar | Metric summary statistics of real, amount or compositional data |
| names.acomp | The names of the parts |
| names.aplus | The names of the parts |
| names.rcomp | The names of the parts |
| names.rmult | The names of the parts |
| names.rplus | The names of the parts |
| norm | Vector space norm |
| normalize | Normalize vectors to norm 1 |
| oneOrDataset | Treating single compositions as one-row datasets |
| perturbe | Perturbation of compositions |
| perturbe.aplus | vectorial arithmetic for datasets with aplus class |
| plot.acomp | Displaying compositions in ternary diagrams |
| plot.aplus | Displaying amounts in scatterplots |
| plot.princomp.acomp | Principal component analysis for Aitchison compositions |
| plot.princomp.aplus | Principal component analysis for amounts in log geometry |
| plot.princomp.rcomp | Principal component analysis for real compositions |
| plot.princomp.rplus | Principal component analysis for real amounts |
| plot.rcomp | Displaying compositions in ternary diagrams |
| plot.relativeLoadings.princomp.acomp | Loadings of relations of two amounts |
| plot.relativeLoadings.princomp.aplus | Loadings of relations of two amounts |
| plot.relativeLoadings.princomp.rcomp | Loadings of relations of two amounts |
| plot.relativeLoadings.princomp.rplus | Loadings of relations of two amounts |
| plot.rmult | Displaying amounts in scatterplots |
| plot.rplus | Displaying amounts in scatterplots |
| power.acomp | Power transform in Aitchisons simplex |
| power.aplus | vectorial arithmetic for datasets with aplus class |
| powerofpsdmatrix | power transform of a matrix |
| predict.princomp.acomp | Principal component analysis for Aitchison compositions |
| predict.princomp.aplus | Principal component analysis for amounts in log geometry |
| predict.princomp.rcomp | Principal component analysis for real compositions |
| predict.princomp.rplus | Principal component analysis for real amounts |
| princomp.acomp | Principal component analysis for Aitchison compositions |
| princomp.aplus | Principal component analysis for amounts in log geometry |
| princomp.rcomp | Principal component analysis for real compositions |
| princomp.rmult | Principle component analysis for Real data |
| princomp.rplus | Principal component analysis for real amounts |
| print.princomp.acomp | Principal component analysis for Aitchison compositions |
| print.princomp.aplus | Principal component analysis for amounts in log geometry |
| print.princomp.rcomp | Principal component analysis for real compositions |
| print.princomp.rplus | Principal component analysis for real amounts |
| print.relativeLoadings.princomp.acomp | Loadings of relations of two amounts |
| print.relativeLoadings.princomp.aplus | Loadings of relations of two amounts |
| print.relativeLoadings.princomp.rcomp | Loadings of relations of two amounts |
| print.relativeLoadings.princomp.rplus | Loadings of relations of two amounts |
| qqnorm.acomp | Normal quantile plots for compositions and amounts |
| qqnorm.aplus | Normal quantile plots for compositions and amounts |
| qqnorm.rcomp | Normal quantile plots for compositions and amounts |
| qqnorm.rplus | Normal quantile plots for compositions and amounts |
| rcomp | Compositions as elements of the Simplex embedded in the D-dimensional real space |
| rcompmargin | Marginal compositions in real geometry |
| rDirichlet | Dirichlet distribution |
| read.geoEAS | Reads a data file in a geoeas format |
| read.geoeas | Reads a data file in a geoeas format |
| relativeLoadings | Loadings of relations of two amounts |
| relativeLoadings.princomp.acomp | Loadings of relations of two amounts |
| relativeLoadings.princomp.aplus | Loadings of relations of two amounts |
| relativeLoadings.princomp.rcomp | Loadings of relations of two amounts |
| relativeLoadings.princomp.rplus | Loadings of relations of two amounts |
| rlnorm.rplus | The multivariate lognormal distribution |
| rmult | Simple treatment of real vectors |
| rnorm.acomp | Normal distributions on special spaces |
| rnorm.aplus | Normal distributions on special spaces |
| rnorm.rcomp | Normal distributions on special spaces |
| rnorm.rmult | Normal distributions on special spaces |
| rnorm.rplus | Normal distributions on special spaces |
| rplus | Amounts i.e. positive numbers analysed as objects of the real vector space |
| runif.acomp | The uniform distribution on the simplex |
| runif.rcomp | The uniform distribution on the simplex |
| sa.dirichlet | Simulated amount datasets |
| sa.dirichlet5 | Simulated amount datasets |
| sa.groups | Simulated amount datasets |
| sa.groups5 | Simulated amount datasets |
| sa.lognormals | Simulated amount datasets |
| sa.lognormals5 | Simulated amount datasets |
| sa.tnormals | Simulated amount datasets |
| sa.tnormals5 | Simulated amount datasets |
| sa.uniform | Simulated amount datasets |
| sa.uniform5 | Simulated amount datasets |
| scalar | Parallel scalar products |
| scale.acomp | Normalizing datasets by centering and scaling |
| scale.aplus | Normalizing datasets by centering and scaling |
| scale.rcomp | Normalizing datasets by centering and scaling |
| scale.rmult | Normalizing datasets by centering and scaling |
| scale.rplus | Normalizing datasets by centering and scaling |
| segments.acomp | Draws straight lines from point to point. |
| segments.aplus | Draws straight lines from point to point. |
| segments.rcomp | Draws straight lines from point to point. |
| segments.rmult | Draws straight lines from point to point. |
| segments.rplus | Draws straight lines from point to point. |
| SimulatedAmounts | Simulated amount datasets |
| split.acomp | Spliting datasets in groups given by factors |
| split.aplus | Spliting datasets in groups given by factors |
| split.rcomp | Spliting datasets in groups given by factors |
| split.rmult | Spliting datasets in groups given by factors |
| split.rplus | Spliting datasets in groups given by factors |
| straight | Draws infinite straight lines. |
| summary.acomp | Summarizing a compositional dataset in terms of ratios |
| summary.aplus | Summaries of amounts |
| summary.rcomp | Summary of compositions in real geometry |
| summary.rmult | Summaries of amounts |
| summary.rplus | Summaries of amounts |
| totals | Total sum of amounts |
| ucipt.inv | Isometric planar transform |
| ult | Uncentered log transform |
| var | Variances and covariances of amounts and compositions |
| variation | Variation matrices of amounts and compositions |
| vp.boxplot | Displaying compositions and amounts by boxplots |
| vp.logboxplot | Displaying compositions and amounts by boxplots |
| vp.qqnorm | Normal quantile plots for compositions and amounts |