| Simple Graph Operations {ggm} | R Documentation |
Finds the vertices, boundary, children, parents of a subset of nodes of a graph.
vertices(amat) bd(nn, amat) ch(nn, amat) pa(nn, amat)
nn |
a vector of nodes. It may either a numeric vector, or a
character vector. If it is character vector must be a subset
of the rownames of the edge matrix. |
amat |
a square matrix with dimnames specifying the adjacency matrix of the graph |
For definitions of the operators see Lauritzen (1996).
vertices returns a character vector with the names of the
vertices of the graph with adjacency matrix amat.
The other operators return a character vector specifying the boundary or the children or the parents of nodes nn
in the graph. This is a numeric or a character vector depending
on the mode of nn.
Giovanni M. Marchetti
Lauritzen, S. (1996). Graphical models. Oxford: Clarendon Press.
## find boundary of a subset of nodes of a DAG
G <- DAG(y ~ x+b+a, b~a, x~a)
vertices(G)
bd("b", G)
bd(c("b", "x"), G)
bd("x", G)
bd(c("x","b"), G)
## find boundary of a subset of nodes of an UG
G <- UG(~ y*x*z + z*h*v)
bd("z", G)
bd(c("y", "x"), G)
bd("v", G)
bd(c("x","v"), G)
## children of a subset of nodes of a DAG
G <- DAG(y ~ x+b+a, b~a, x~a)
ch("b", G)
ch(c("b", "x"), G)
ch("x", G)
ch(c("a","x"), G)
## parents of a subset of nodes of a DAG
pa("b", G)
pa(c("b", "x"), G)
pa("x", G)
pa(c("x","b"), G)