| qb.coda {qtlbim} | R Documentation |
This function creates an object of class mcmc from
an object of class qb produced by the package R/qb.
qb.coda( object, element, variables)
object |
An object of class qb returned by calling the function
qb.mcmc.
|
element |
A character string which has to one of "iterdiag", "mainloci",
"pairloci", "covariates", or
"gbye"; default is "iterdiag". |
variables |
A vector of integers specifying the columns or
column names of element to be considered. Details about the
columns can be found in qb.mcmc |
This package requires the package coda.
An object of class mcmc. This object could be
used to analyze the MCMC output using R/coda.
Dr. Nengjun Yi, et al., nyi@ms.ssg.uab.edu
## Default plots for iteration diagnostics "iterdiag". temp <- qb.coda(qbExample) plot(temp) ## Summaries for some "mainloci" elements. temp <- qb.coda(qbExample, "mainloci") plot(temp)