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| AscInd | Ascendency network indices |
| Conesprings | Cone Spring ecosystem |
| Dependency | Direct and indirect dependency analysis |
| EffInd | Effective measures (or roles) suite: weighted measures for networks |
| EnvInd | Environ network indices |
| GenInd | General network indices |
| PathInd | Pathway analysis |
| Takapoto | Takapoto atoll planktonic food web |
| TrophInd | The trophic level and omnivory index |
| UncInd | Network uncertainty indices and constraint effiencies |