| SNPsurv.dat {SimHap} | R Documentation |
SNPsurv.dat is an example genotypic data set containing single nucleotide polymorphism (SNP) genotypes for use with snp.surv and haplo.surv
data(SNPsurv.dat)
A data frame with 38 observations on the following 4 variables.
IDSNP_1SNP_2SNP_3
Simulated SNP data for use with survPheno.dat
data(SNPsurv.dat)
# transforms SNPlong.dat to an object containing 3 columns
# per SNP - additive, dominant and recessive, where genotypes
# defined in 'baseline' serve as the baseline genotypes
survGeno.dat <- SNP2Geno(SNPsurv.dat, baseline=c("V2V2", "GG", "CC"))
data(survPheno.dat)
mymodel <- snp.surv(formula1=Surv(time, status)~age+SNP_1_add,
formula2=Surv(time, status)~age, pheno=survPheno.dat,
geno=survGeno.dat)
summary(mymodel)