| c.kdist |
the class of objects 'kdist' (K distance matrices) |
| c.ktab |
the class of objects 'ktab' (K-tables) |
| cailliez |
Transformation to make Euclidean a distance matrix |
| capitales |
Road Distances |
| carni19 |
Phylogeny and quantative trait of carnivora |
| carni70 |
Phylogeny and quantitative traits of carnivora |
| carniherbi49 |
Taxonomy, phylogenies and quantitative traits of carnivora and herbivora |
| casitas |
Enzymatic polymorphism in Mus musculus |
| cca |
Canonical Correspondence Analysis |
| char2genet |
A class of data: tables of populations and alleles |
| chatcat |
Qualitative Weighted Variables |
| chats |
Pair of Variables |
| chazeb |
Charolais-Zebus |
| chevaine |
Enzymatic polymorphism in Leuciscus cephalus |
| clementines |
Fruit Production |
| cnc2003 |
Frequenting movie theaters in France in 2003 |
| coinertia |
Coinertia Analysis |
| col.names |
the class of objects 'ktab' (K-tables) |
| coleo |
Table of Fuzzy Biological Traits |
| corkdist |
Tests of randomization between distances applied to 'kdist' objetcs |
| corvus |
Corvus morphology |
| count2genet |
A class of data: tables of populations and alleles |
| deug |
Exam marks for some students |
| disc |
Rao's dissimilarity coefficient |
| discrimin |
Linear Discriminant Analysis (descriptive statistic) |
| discrimin.coa |
Discriminant Correspondence Analysis |
| dist.binary |
Computation of Distance Matrices for Binary Data |
| dist.dudi |
Computation of the Distance Matrix from a Statistical Triplet |
| dist.genet |
Genetic distances from gene frequencies |
| dist.neig |
Computation of the Distance Matrix associated to a Neighbouring Graph |
| dist.prop |
Computation of Distance Matrices of Percentage Data |
| dist.quant |
Computation of Distance Matrices on Quantitative Variables |
| dist.taxo |
Taxonomy |
| divc |
Rao's diversity coefficient also called quadratic entropy |
| divcmax |
Maximal value of Rao's diversity coefficient also called quadratic entropy |
| dotchart.phylog |
Representation of many quantitative variables in front of a phylogenetic tree |
| dotcircle |
Representation of n values on a circle |
| doubs |
Pair of Ecological Tables |
| dpcoa |
Double principal coordinate analysis |
| dudi |
Duality Diagram |
| dudi.acm |
Multiple Correspondence Analysis |
| dudi.coa |
Correspondence Analysis |
| dudi.dec |
Decentred Correspondence Analysis |
| dudi.fca |
Fuzzy Correspondence Analysis and Fuzzy Principal Components Analysis |
| dudi.fpca |
Fuzzy Correspondence Analysis and Fuzzy Principal Components Analysis |
| dudi.hillsmith |
Ordination of Tables mixing quantitative variables and factors |
| dudi.mix |
Ordination of Tables mixing quantitative variables and factors |
| dudi.nsc |
Non symmetric correspondence analysis |
| dudi.pca |
Principal Component Analysis |
| dudi.pco |
Principal Coordinates Analysis |
| dunedata |
Dune Meadow Data |
| kcponds |
Ponds in a nature reserve |
| kdist |
the class of objects 'kdist' (K distance matrices) |
| kdist2ktab |
Transformation of K distance matrices (object 'kdist') into K Euclidean representations (object 'ktab') |
| kdisteuclid |
a way to obtain Euclidean distance matrices |
| kplot |
Generic Function for Multiple Graphs in a K-tables Analysis |
| kplot.foucart |
Multiple Graphs for the Foucart's Correspondence Analysis |
| kplot.mcoa |
Multiple Graphs for a Multiple Co-inertia Analysis |
| kplot.mfa |
Multiple Graphs for a Multiple Factorial Analysis |
| kplot.pta |
Multiple Graphs for a Partial Triadic Analysis |
| kplot.sepan |
Multiple Graphs for Separated Analyses in a K-tables |
| kplot.statis |
Multiple Graphs of a STATIS Analysis |
| krandtest |
Class of the Permutation Tests (in C). |
| ktab |
the class of objects 'ktab' (K-tables) |
| ktab.data.frame |
Creation of K-tables from a data frame |
| ktab.list.df |
Creating a K-tables from a list of data frames. |
| ktab.list.dudi |
Creation of a K-tables from a list of duality diagrams |
| ktab.match2ktabs |
STATIS and Co-Inertia : Analysis of a series of paired ecological tables |
| ktab.util.names |
the class of objects 'ktab' (K-tables) |
| ktab.within |
Process to go from a Within Analysis to a K-tables |
| macaca |
Landmarks |
| macon |
Wine Tasting |
| mafragh |
Phyto-Ecological Survey |
| mantel.randtest |
Mantel test (correlation between two distance matrices (in C).) |
| mantel.rtest |
Mantel test (correlation between two distance matrices (in R).) |
| mantelkdist |
Tests of randomization between distances applied to 'kdist' objetcs |
| maples |
Phylogeny and quantitative traits of flowers |
| mariages |
Correspondence Analysis Table |
| mcoa |
Multiple CO-inertia Analysis |
| meau |
Ecological Data : sites-variables, sites-species, where and when |
| meaudret |
Ecological Data : sites-variables, sites-species, where and when |
| mfa |
Multiple Factorial Analysis |
| microsatt |
Genetic Relationships between cattle breeds with microsatellites |
| mjrochet |
Phylogeny and quantitative traits of teleos fishes |
| mld |
Multi Level Decomposition of unidimensional data |
| mollusc |
Faunistic Communities and Sampling Experiment |
| monde84 |
Global State of the World in 1984 |
| morphosport |
Athletes' Morphology |
| mstree |
Minimal Spanning Tree |
| multispati |
Multivariate spatial analysis |
| multispati.randtest |
Multivariate spatial autocorrelation test (in C) |
| multispati.rtest |
Multivariate spatial autocorrelation test |
| palm |
Phylogenetic and quantitative traits of amazonian palm trees |
| pap |
Taxonomy and quantitative traits of carnivora |
| pcaiv |
Principal component analysis with respect to instrumental variables |
| pcaivortho |
Principal Component Analysis with respect to orthogonal instrumental variables |
| pcoscaled |
Simplified Analysis in Principal Coordinates |
| perthi02 |
Contingency Table with a partition in Molecular Biology |
| phylog |
Phylogeny |
| PI2newick |
Import data files from Phylogenetic Independance Package |
| plot.between |
Between-Class Analysis |
| plot.coinertia |
Coinertia Analysis |
| plot.corkdist |
Tests of randomization between distances applied to 'kdist' objetcs |
| plot.discrimin |
Linear Discriminant Analysis (descriptive statistic) |
| plot.dpcoa |
Double principal coordinate analysis |
| plot.foucart |
K-tables Correspondence Analysis with the same rows and the same columns |
| plot.krandtest |
Class of the Permutation Tests (in C). |
| plot.mcoa |
Multiple CO-inertia Analysis |
| plot.mfa |
Multiple Factorial Analysis |
| plot.multispati |
Multivariate spatial analysis |
| plot.niche |
Method to Analyse a pair of tables : Environmental and Faunistic Data |
| plot.pcaiv |
Principal component analysis with respect to instrumental variables |
| plot.phylog |
Plot phylogenies |
| plot.procuste |
Simple Procruste Rotation between two sets of points |
| plot.pta |
Partial Triadic Analysis of a K-tables |
| plot.randtest |
Class of the Permutation Tests (in C). |
| plot.rlq |
RLQ analysis |
| plot.rtest |
Class of the Permutation Tests (in R). |
| plot.sepan |
Separated Analyses in a K-tables |
| plot.statis |
STATIS, a method for analysing K-tables |
| plot.within |
Within Analyses |
| poly2area |
Graphical Display of Areas |
| prep.fuzzy.var |
Fuzzy Correspondence Analysis and Fuzzy Principal Components Analysis |
| presid2002 |
Results of the French presidential elections of 2002 |
| print.amova |
Analysis of molecular variance |
| print.between |
Between-Class Analysis |
| print.coinertia |
Coinertia Analysis |
| print.corkdist |
Tests of randomization between distances applied to 'kdist' objetcs |
| print.discrimin |
Linear Discriminant Analysis (descriptive statistic) |
| print.dpcoa |
Double principal coordinate analysis |
| print.dudi |
Duality Diagram |
| print.foucart |
K-tables Correspondence Analysis with the same rows and the same columns |
| print.kdist |
the class of objects 'kdist' (K distance matrices) |
| print.krandtest |
Class of the Permutation Tests (in C). |
| print.ktab |
the class of objects 'ktab' (K-tables) |
| print.mcoa |
Multiple CO-inertia Analysis |
| print.mfa |
Multiple Factorial Analysis |
| print.multispati |
Multivariate spatial analysis |
| print.neig |
Neighbourhood Graphs |
| print.niche |
Method to Analyse a pair of tables : Environmental and Faunistic Data |
| print.nipals |
Non-linear Iterative Partial Least Squares (NIPALS) algorithm |
| print.orthobasis |
Orthonormal basis for orthonormal transform |
| print.pcaiv |
Principal component analysis with respect to instrumental variables |
| print.phylog |
Phylogeny |
| print.procuste |
Simple Procruste Rotation between two sets of points |
| print.pta |
Partial Triadic Analysis of a K-tables |
| print.randtest |
Class of the Permutation Tests (in C). |
| print.rlq |
RLQ analysis |
| print.rtest |
Class of the Permutation Tests (in R). |
| print.sepan |
Separated Analyses in a K-tables |
| print.statis |
STATIS, a method for analysing K-tables |
| print.within |
Within Analyses |
| procella |
Phylogeny and quantitative traits of birds |
| procuste |
Simple Procruste Rotation between two sets of points |
| procuste.randtest |
Monte-Carlo Test on the sum of the singular values of a procustean rotation (in C). |
| procuste.rtest |
Monte-Carlo Test on the sum of the singular values of a procustean rotation (in R). |
| pta |
Partial Triadic Analysis of a K-tables |
| radial.phylog |
Plot phylogenies |
| randEH |
Nee and May's random process |
| randtest |
Class of the Permutation Tests (in C). |
| randtest.amova |
Permutation tests on an analysis of molecular variance (in C). |
| randtest.between |
Monte-Carlo Test on the between-groups inertia percentage (in C). |
| randtest.cca |
Monte-Carlo Test on the percentage of explained (i.e. constrained) inertia |
| randtest.coinertia |
Monte-Carlo test on a Co-inertia analysis (in C). |
| randtest.discrimin |
Monte-Carlo Test on a Discriminant Analysis (in C). |
| randtest.pcaiv |
Monte-Carlo Test on the percentage of explained (i.e. constrained) inertia |
| randtest.pcaivortho |
Monte-Carlo Test on the percentage of explained (i.e. constrained) inertia |
| randtest.rlq |
RLQ analysis |
| rankrock |
Ordination Table |
| reciprocal.coa |
Reciprocal scaling after a correspondence analysis |
| reconst |
Reconstitution of Data from a Duality Diagram |
| redo.dudi |
Duality Diagram |
| rhone |
Physico-Chemistry Data |
| rlq |
RLQ analysis |
| row.names.ktab |
the class of objects 'ktab' (K-tables) |
| rpjdl |
Avifauna and Vegetation |
| rtest |
Class of the Permutation Tests (in R). |
| rtest.between |
Monte-Carlo Test on the between-groups inertia percentage (in R). |
| rtest.discrimin |
Monte-Carlo Test on a Discriminant Analysis (in R). |
| rtest.niche |
Method to Analyse a pair of tables : Environmental and Faunistic Data |
| Rtoade4 |
Format Change Utility |
| RV.rtest |
Monte-Carlo Test on the sum of eigenvalues of a co-inertia analysis (in R). |
| RVdist.randtest |
Tests of randomization on the correlation between two distance matrices (in R). |
| RVkdist |
Tests of randomization between distances applied to 'kdist' objetcs |
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