| Genotype names {noia} | R Documentation |
genotype.names provides the names of all possible genotypes in the
order required by the NOIA model (Alvarez-Castro and Carlborg 2007). The codes for the genotypes are
stored in the vector genotypesNames.
genNames(nloc = 2) genNamesAppend(name)
nloc |
Number of loci |
name |
The name of the genotype to which an extra locus has to be added. |
genNamesAppend is an internal function and is not supposed to
be called by anything else than genNames.
The names of the genotypes are stored in the vector
genotypesNames. By default, they are "1", "2", and
"3", the heterozygotes being "2". The genotypes at different loci
are then put together, such as "123" for 3 loci.
Arnaud Le Rouzic <a.p.s.lerouzic@bio.uio.no>
Alvarez-Castro JM, Carlborg O. (2007). A unified model for functional and statistical epistasis and its application in quantitative trait loci analysis. Genetics 176(2):1151-1167.
Le Rouzic A, Alvarez-Castro JM. (2008). Estimation of genetic effects and genotype-phenotype maps. Evolutionary Bioinformatics, 4.
genNames(3)