| ouch-package {ouch} | R Documentation |
The ouch package provides facilities for Ornstein-Uhlenbeck based methods of phylogenetic comparative analysis
The basic class, ouchtree, is provided to encode a phylogenetic
tree. Plot and print methods are provided.
The class browntree derives from class ouchtree and
encodes the results of fitting a Brownian Motion model to data.
The class hansentree derives from class ouchtree and
encodes the results of fitting a Hansen model to data.
ouchtreebrown,
browntree-classhansen,
hansentree-classsimulate-browntree, simulate-hansentreeplot-browntree, plot-hansentreeape2ouchape2ouchAaron A. King (kingaa at umich dot edu)
Butler, M.A. and A.A. King (2004) Phylogenetic comparative analysis: a modeling approach for adaptive evolution. American Naturalist 164:683-695.