| qbHyper {qtlbim} | R Documentation |
Retrieve MCMC samples for hyper dataset from R/qtl. Code provided to recreate qbHyper if desired. These samples are used in vignettes and demos.
data(qbHyper)
data(qbHyper)
summary(qbHyper)
## Not run:
## Here is code to generate qbHyper.
## Get data from R/qtl.
data(hyper)
## Restrict to autosomes.
hyper <- subset(hyper, chr = 1:19)
## Calculate genotype probabilities.
hyper <- qb.genoprob(hyper, step=2)
## Create MCMC samples.
qbHyper <- qb.mcmc(hyper, n.thin = 40, seed = 1616)
## The next line saves qbHyper as an external binary file.
save("qbHyper", file = "qbHyper.RData")
## End(Not run)