| plot.qb.pairloci {qtlbim} | R Documentation |
Summaries and detailed scatterplot showing all MCMC samples for epistatic pairs for selected chromosomes.
qb.pairloci(qbObject, chr, ...) ## S3 method for class 'qb.pairloci': plot(x, main, cex = 0.75, ... ) ## S3 method for class 'qb.pairloci': print(x, ... ) ## S3 method for class 'qb.pairloci': summary(object, ... )
qbObject |
Object of class qb. |
object |
Object of class qb.pairloci. |
x |
Object of class qb.pairloci. |
chr |
Identifiers for one or two chromosomes. |
main |
Main title for plot. |
cex |
Character expansion of plot symbols. |
... |
Parameters to methods. |
Find pairs of loci in MCMC samples. Produce scatter plot with generic
plot or show numerical summary. The plot provides position
detail complementary to qb.multloci and
qb.scantwo.
Brian S. Yandell, yandell@stat.wisc.edu
plot.qb, qb.scantwo,
qb.multloci
data(qbExample) tmpar <- par(mfrow = c(2,2)) temp <- qb.pairloci(qbExample, c(1,2)) summary(temp) plot(temp) temp <- qb.pairloci(qbExample, c(1,3)) summary(temp) plot(temp) par(tmpar)