| getSNPMaP {SNPMaP} | R Documentation |
Get or set the values of the slots in a SNPMaP object.
getSNPMaP(x, ...) setSNPMaP(x, namedList)
x |
An object of class SNPMaP. |
namedList |
A list of the form list(useMM=TRUE, normalize=FALSE); the exact name of a slot followed by the new value. |
... |
Slots to retrieve data from (may be partial matches). |
Currently, getSNPMaP() will retrieve the values of the following slots: useMM, normalize, logInt, summary,
lowMemory, tempDir, table, chiptype, celDim, set, snps, chps, cols, width, transformation, experiment,
created, version, majorHistory. setSNPMaP() will set the following slots: useMM, normalize, logInt, summary,
lowMemory, tempDir, set, experiment. Comments can be retrived and set using comment().
For getSNPMaP(), a named list of slot values (suitable as an argument for setSNPMaP()).
For setSNPMaP(), a named list of the old slot values (suitable as an argument for setSNPMaP()).
setSNPMaP() does not clone the data in SNPMaP objects stored on disk (see cloneSNPMaP().)
## Not run: ## Retrieve slot values getSNPMaP(x, 'experiment', 'snps') ## Set new slot values x <- setSNPMaP(x, list(useMM=TRUE, normalize=FALSE)) ## End(Not run)