| fit.CopyNumberSegmentationModel {aroma.affymetrix} | R Documentation |
Fits the model.
## S3 method for class 'CopyNumberSegmentationModel': fit(this, arrays=NULL, chromosomes=getChromosomes(this), force=FALSE, aliased=FALSE, ..., .retResults=FALSE, verbose=FALSE)
arrays |
A vector of array indices specifying which arrays to
be considered. If NULL, all are processed. |
chromosome |
A vector of chromosomes indices specifying which
chromosomes to be considered. If NULL, all are processed. |
force |
If FALSE, the model will not be fitted again if it was
already fitted. |
... |
Additional arguments passed to the segmentation method for
the RawGenomicSignals. |
.retResults |
If TRUE, CBS fit structures are returned for each
fitted array and chromosome. |
verbose |
A logical or Verbose. |
Returns a named list of named lists.
Arguments in ... are passed down to the internal fit function,
which means that it is possible to fine tune even further.
Henrik Bengtsson (http://www.braju.com/R/)
For more information see CopyNumberSegmentationModel.