| testgC {ccems} | R Documentation |
This function runs lsoda using the compiled C code of
the total concentration constraint (TCC)
system equations that should have been created by mkg.
testgC(g)
g |
The output of mkg. Since mkg already calls this function, it has no independent use. |
Components of g used by this function are:
g$parmsTCC which includes the total concentrations, the fraction of active protein p, and the spur graph complete dissociation
constant parameter values Kj; and the lsoda ODE integration
tolerance parameters g$rtol and g$atol.
No value returned. Ten time points are printed to the screen. The free concentrations should show signs of convergence toward a steady state.
Tom Radivoyevitch
library(ccems)
topology <- list(
heads=c("R1t0","R2t0"),
sites=list(
s=list( # s-site thread #
m=c("R1t1"), # monomer 1
d=c("R2t1","R2t2") # dimer 2
)
)
)
g=mkg(topology,TCC=TRUE)
testgC(g) # this checks the compiled code again (it was already called in mkg)