| plot.rcc {integrOmics} | R Documentation |
This function provides scree plot of the canonical correlations.
## S3 method for class 'rcc':
plot(x, scree.type = c("pointplot", "barplot"), ...)
x |
object of class inheriting from "rcc". |
scree.type |
character string, (partially) matching one of "pointplot" or "barplot",
determining the kind of scree plots to be produced. |
... |
arguments to be passed to other methods. For the "pointplot" type
see points, for "barplot" type see barplot. |
Sébastien Déjean and Ignacio González.
data(nutrimouse)
X <- nutrimouse$lipid
Y <- nutrimouse$gene
nutri.res <- rcc(X, Y, lambda1 = 0.064, lambda2 = 0.008)
## 'pointplot' type scree
plot(nutri.res) #(default)
plot(nutri.res, pch = 19, cex = 1.2,
col = c(rep("red", 3), rep("darkblue", 18)))
## 'barplot' type scree
plot(nutri.res, scree.type = "barplot")
plot(nutri.res, scree.type = "barplot", density = 20, col = "black")