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| CalciOMatic-package | Automatic Calcium Imaging Analysis |
| anova4Fits | Perform an ANalysis Of VAriance between two fit objects |
| caBiExp | BiExponential Time Course of Intracellular Calcium Concentration |
| caFromDf | Get Calcium Concentration From a Fluorescence Data Frame, Using the Ratiometric Transformation |
| caFromRatio | Get Calcium Concentration From Fluorescence Signals, Using the Ratiometric Transformation |
| CalciOMatic | Automatic Calcium Imaging Analysis |
| caMonoBiExpFromIG | Mono- or Bi- Exponential Time Course of Intracellular Calcium Concentration |
| caMonoExp | MonoExponential Time Course of Intracellular Calcium Concentration |
| directFit | Perform a Direct Fit of Fluorescence Signals Obtained with a Ratiometric Dye |
| fluo | Convert Intracellular Calcium Concentration into Fluorescence Values |
| getThetaRatio | Compute confidence intervals for parameters of calcium dynamics model fitted with the ratiometric approach |
| igDirect | Provide an Initial Guess For the Experiment-Specific Parameters of a Direct Fit |
| igRatio | Provide an Initial Guess For a Calcium Concentration Ratiometric Fit |
| inVitro | Calcium Transients and Fura 2 Loading Curves |
| mkFluo4DirectFit | Define Predicted Fluorescence Signals |
| mkFunction4DirectFit | Function for Direct Fit |
| mkFunction4RatioFit | Function for Ratiometric Fit with the nls function |
| plot.direct_fit | Plot Function for Objects of Class "direct\_fit" |
| plot.fluo_rawdata | Plot Function for Objects of Class "fluo\_rawdata" |
| plot.ratio_fit | Plot Method for Objects of Class "ratio\_fit" |
| plot.ratio_fit_list | Plot Method for Objects of Class "ratio\_fit\_list" |
| plotCalciOMatic | Low-Level Plot Function for CalciOMatic |
| ratioExpPhysio | Gathers the Results of a Ratiometric Experiment in an Object of Class "fluo\_rawdata" |
| ratioExpSimul | Simulate Ratiometric Experiment |
| ratioFitFromCa | Perform a Fit on an Intracellular Calcium Concentration Vector |
| ratioFitFromDf | Perform a Ratiometric Fit from a "fluo\_rawdata" object |
| transientConvexPart | Select the Convex or Concave Part of a Transient |