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| depmixS4-package | depmixS4 provides classes for specifying and fitting hidden Markov models |
| AIC | Compute AIC and BIC for (dep-)mix objects |
| AIC,depmix-method | Compute AIC and BIC for (dep-)mix objects |
| AIC,mix-method | Compute AIC and BIC for (dep-)mix objects |
| balance | Balance Scale Data |
| BIC | Compute AIC and BIC for (dep-)mix objects |
| BIC,depmix-method | Compute AIC and BIC for (dep-)mix objects |
| BIC,mix-method | Compute AIC and BIC for (dep-)mix objects |
| BINOMresponse | Response models currently implemented in depmix. |
| depmix | Dependent Mixture Model Specifiction |
| depmix,ANY-method | Dependent Mixture Model Specifiction |
| depmix-class | Class "depmix" |
| depmix-methods | 'depmix' and 'mix' methods. |
| depmix.fit | Fit 'depmix' or 'mix' models |
| depmix.fitted | Class "depmix.fitted" |
| depmix.fitted-class | Class "depmix.fitted" |
| depmix.sim | Class "depmix.sim" |
| depmix.sim-class | Class "depmix.sim" |
| depmixS4 | depmixS4 provides classes for specifying and fitting hidden Markov models |
| fit | Fit 'depmix' or 'mix' models |
| fit,depmix-method | Fit 'depmix' or 'mix' models |
| fit,mix-method | Fit 'depmix' or 'mix' models |
| forwardbackward | Forward and backward variables |
| forwardbackward,depmix-method | Forward and backward variables |
| freepars | 'depmix' and 'mix' methods. |
| freepars,depmix-method | 'depmix' and 'mix' methods. |
| freepars,depmix.fitted-method | 'depmix' and 'mix' methods. |
| freepars,mix-method | 'depmix' and 'mix' methods. |
| freepars,mix.fitted-method | 'depmix' and 'mix' methods. |
| GAMMAresponse | Response models currently implemented in depmix. |
| getdf | Methods for creating depmix response models |
| getdf,response-method | Methods for creating depmix response models |
| getpars | 'depmix' and 'mix' methods. |
| getpars,depmix-method | 'depmix' and 'mix' methods. |
| getpars,mix-method | 'depmix' and 'mix' methods. |
| GLMresponse | Methods for creating depmix response models |
| GLMresponse,formula-method | Methods for creating depmix response models |
| GLMresponse-class | Class "GLMresponse" and class "transInit" |
| llratio | Log likelihood ratio test on two fitted models |
| logLik | 'depmix' and 'mix' methods. |
| logLik,depmix-method | 'depmix' and 'mix' methods. |
| logLik,mix-method | 'depmix' and 'mix' methods. |
| loglikelihoodratio | Log likelihood ratio test on two fitted models |
| makeDepmix | Dependent Mixture Model Specifiction: the long way |
| mix | Mixture Model Specifiction |
| mix,ANY-method | Mixture Model Specifiction |
| mix-class | Class "mix" |
| mix.fit | Fit 'depmix' or 'mix' models |
| mix.fitted-class | Class "mix.fitted" |
| mix.sim | Class "mix.sim" |
| mix.sim-class | Class "mix.sim" |
| MULTINOMresponse | Response models currently implemented in depmix. |
| MVNresponse | Response models currently implemented in depmix. |
| MVNresponse-class | Class "GLMresponse" and class "transInit" |
| nobs | 'depmix' and 'mix' methods. |
| nobs,depmix-method | 'depmix' and 'mix' methods. |
| nobs,mix-method | 'depmix' and 'mix' methods. |
| NORMresponse | Response models currently implemented in depmix. |
| npar | 'depmix' and 'mix' methods. |
| npar,depmix-method | 'depmix' and 'mix' methods. |
| npar,mix-method | 'depmix' and 'mix' methods. |
| nresp | Class "depmix" |
| nresp,depmix-method | Class "depmix" |
| nresp,depmix.sim-method | Class "depmix.sim" |
| nresp,mix-method | Class "mix" |
| nresp,mix.sim-method | Class "mix.sim" |
| nstates | Class "depmix" |
| nstates,depmix-method | Class "depmix" |
| nstates,depmix.sim-method | Class "depmix.sim" |
| nstates,mix-method | Class "mix" |
| nstates,mix.sim-method | Class "mix.sim" |
| ntimes | Class "depmix" |
| ntimes,depmix-method | Class "depmix" |
| ntimes,depmix.sim-method | Class "depmix.sim" |
| ntimes,mix-method | Class "mix" |
| ntimes,mix.sim-method | Class "mix.sim" |
| POISSONresponse | Response models currently implemented in depmix. |
| posterior | Posterior states/classes |
| posterior,depmix.fitted-method | Posterior states/classes |
| posterior,mix.fitted-method | Posterior states/classes |
| response | Methods for creating depmix response models |
| response-class | Class "response" |
| response-classes | Class "GLMresponse" and class "transInit" |
| responses | Response models currently implemented in depmix. |
| setpars | 'depmix' and 'mix' methods. |
| setpars,depmix-method | 'depmix' and 'mix' methods. |
| setpars,mix-method | 'depmix' and 'mix' methods. |
| show | Dependent Mixture Model Specifiction |
| show,depmix-method | Dependent Mixture Model Specifiction |
| show,depmix.fitted-method | Fit 'depmix' or 'mix' models |
| show,GLMresponse-method | Methods for creating depmix response models |
| show,llratio-method | Log likelihood ratio test on two fitted models |
| show,mix-method | Mixture Model Specifiction |
| show,mix.fitted-method | Fit 'depmix' or 'mix' models |
| show,MVNresponse-method | Response models currently implemented in depmix. |
| simulate | Methods to simulate from (dep-)mix models |
| simulate,BINOMresponse-method | Methods to simulate from (dep-)mix models |
| simulate,depmix-method | Methods to simulate from (dep-)mix models |
| simulate,GAMMAresponse-method | Methods to simulate from (dep-)mix models |
| simulate,GLMresponse-method | Methods to simulate from (dep-)mix models |
| simulate,mix-method | Methods to simulate from (dep-)mix models |
| simulate,MULTINOMresponse-method | Methods to simulate from (dep-)mix models |
| simulate,MVNresponse-method | Methods to simulate from (dep-)mix models |
| simulate,NORMresponse-method | Methods to simulate from (dep-)mix models |
| simulate,POISSONresponse-method | Methods to simulate from (dep-)mix models |
| simulate,response-method | Methods to simulate from (dep-)mix models |
| simulate,transInit-method | Methods to simulate from (dep-)mix models |
| speed | Speed Accuracy Switching Data |
| summary | Dependent Mixture Model Specifiction |
| summary,depmix-method | Dependent Mixture Model Specifiction |
| summary,depmix.fitted-method | Fit 'depmix' or 'mix' models |
| summary,mix-method | Mixture Model Specifiction |
| summary,mix.fitted-method | Fit 'depmix' or 'mix' models |
| transInit | Methods for creating depmix response models |
| transInit,formula-method | Methods for creating depmix response models |
| transInit-class | Class "GLMresponse" and class "transInit" |