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| intervals-package | Tools for working with points and intervals |
| adjust_closure | Re-represent integer intervals with open or closed endpoints |
| adjust_closure,Intervals-method | Re-represent integer intervals with open or closed endpoints |
| adjust_closure,Intervals_full-method | Re-represent integer intervals with open or closed endpoints |
| as.matrix | Extract matrix of endpoints |
| as.matrix.Intervals | Extract matrix of endpoints |
| as.matrix.Intervals_full | Extract matrix of endpoints |
| c | Combine different interval matrix objects |
| c.Intervals | Combine different interval matrix objects |
| c.Intervals_full | Combine different interval matrix objects |
| closed | Class "Intervals_virtual" |
| closed,Intervals_virtual-method | Class "Intervals_virtual" |
| closed<- | Classes "Intervals" and "Intervals_full" |
| closed<-,Intervals-method | Classes "Intervals" and "Intervals_full" |
| closed<-,Intervals_full-method | Classes "Intervals" and "Intervals_full" |
| close_intervals | Re-represent integer intervals with open or closed endpoints |
| close_intervals,Intervals_virtual-method | Re-represent integer intervals with open or closed endpoints |
| clusters | Identify clusters in a collection of positions or intervals |
| clusters,Intervals_virtual-method | Identify clusters in a collection of positions or intervals |
| clusters,numeric-method | Identify clusters in a collection of positions or intervals |
| coerce,Intervals,Intervals_full-method | Classes "Intervals" and "Intervals_full" |
| coerce,Intervals_full,Intervals-method | Classes "Intervals" and "Intervals_full" |
| coerce,Intervals_virtual,character-method | Class "Intervals_virtual" |
| contract | Expand or contract intervals |
| contract,Intervals_virtual-method | Expand or contract intervals |
| distance_to_nearest | Compute distance to nearest position in a set of intervals |
| distance_to_nearest,Intervals_virtual_or_numeric,Intervals_virtual_or_numeric-method | Compute distance to nearest position in a set of intervals |
| empty | Identify empty interval rows |
| empty,Intervals-method | Identify empty interval rows |
| empty,Intervals_full-method | Identify empty interval rows |
| expand | Expand or contract intervals |
| expand,Intervals_virtual-method | Expand or contract intervals |
| head,Intervals_virtual-method | Class "Intervals_virtual" |
| initialize,Intervals-method | Classes "Intervals" and "Intervals_full" |
| initialize,Intervals_full-method | Classes "Intervals" and "Intervals_full" |
| initialize,Intervals_virtual-method | Class "Intervals_virtual" |
| Intervals | Classes "Intervals" and "Intervals_full" |
| intervals | Tools for working with points and intervals |
| Intervals-class | Classes "Intervals" and "Intervals_full" |
| Intervals_full | Classes "Intervals" and "Intervals_full" |
| Intervals_full-class | Classes "Intervals" and "Intervals_full" |
| Intervals_virtual-class | Class "Intervals_virtual" |
| Intervals_virtual_or_numeric-class | Class "Intervals_virtual_or_numeric" |
| interval_complement | Compute the complement of a set of intervals |
| interval_complement,Intervals_virtual-method | Compute the complement of a set of intervals |
| interval_difference | Compute set difference |
| interval_difference,Intervals_virtual,Intervals_virtual-method | Compute set difference |
| interval_included | Assess inclusion of one set of intervals with respect to another |
| interval_included,Intervals,Intervals-method | Assess inclusion of one set of intervals with respect to another |
| interval_included,Intervals_full,Intervals_full-method | Assess inclusion of one set of intervals with respect to another |
| interval_intersection | Compute the intersection of one or more sets of intervals |
| interval_intersection,Intervals_virtual-method | Compute the intersection of one or more sets of intervals |
| interval_intersection,missing-method | Compute the intersection of one or more sets of intervals |
| interval_overlap | Assess overlap from one set of intervals to another |
| interval_overlap,ANY,missing-method | Assess overlap from one set of intervals to another |
| interval_overlap,Intervals_virtual_or_numeric,Intervals_virtual_or_numeric-method | Assess overlap from one set of intervals to another |
| interval_overlap,missing,ANY-method | Assess overlap from one set of intervals to another |
| interval_union | Compute the union of intervals in one or more interval matrices |
| interval_union,Intervals_virtual-method | Compute the union of intervals in one or more interval matrices |
| interval_union,missing-method | Compute the union of intervals in one or more interval matrices |
| is.na,Intervals_virtual-method | Class "Intervals_virtual" |
| open_intervals | Re-represent integer intervals with open or closed endpoints |
| open_intervals,Intervals_virtual-method | Re-represent integer intervals with open or closed endpoints |
| plot | Plotting methods for interval objects |
| plot.Intervals | Plotting methods for interval objects |
| plot.Intervals_full | Plotting methods for interval objects |
| reduce | Compactly re-represent the points in a set of intervals |
| reduce,Intervals_virtual-method | Compactly re-represent the points in a set of intervals |
| sgd | Yeast gene model sample data |
| show,Intervals_virtual-method | Class "Intervals_virtual" |
| size | Compute interval sizes |
| size,Intervals-method | Compute interval sizes |
| size,Intervals_full-method | Compute interval sizes |
| t,Intervals_virtual-method | Class "Intervals_virtual" |
| tail,Intervals_virtual-method | Class "Intervals_virtual" |
| type | Class "Intervals_virtual" |
| type,Intervals_virtual-method | Class "Intervals_virtual" |
| type<- | Class "Intervals_virtual" |
| type<-,Intervals_virtual-method | Class "Intervals_virtual" |
| which_nearest | Identify nearest member(s) in a set of intervals |
| which_nearest,Intervals_virtual,Intervals_virtual-method | Identify nearest member(s) in a set of intervals |
| which_nearest,Intervals_virtual,numeric-method | Identify nearest member(s) in a set of intervals |
| which_nearest,numeric,Intervals_virtual-method | Identify nearest member(s) in a set of intervals |
| which_nearest,numeric,numeric-method | Identify nearest member(s) in a set of intervals |
| [,Intervals-method | Classes "Intervals" and "Intervals_full" |
| [,Intervals_full-method | Classes "Intervals" and "Intervals_full" |
| [<-,Intervals,ANY,missing,Intervals_virtual-method | Classes "Intervals" and "Intervals_full" |
| [<-,Intervals_full,ANY,missing,Intervals_virtual-method | Classes "Intervals" and "Intervals_full" |