![[R logo]](../../../doc/html/logo.jpg)
| findLDblocks | Identifying LD blocks |
| freq.hap | Haplotype frequencies |
| getLD | Computation of LD Measures |
| mat | Computation of LD Measures |
| plot.getLD | Plotting a getLD Object |
| plot.LDblocks | Plotting a LDblock Object |
| print.LDblock | Identifying LD blocks |
| simuBkMap | Haplotype frequencies for simulation |
| step3way | A named list used internally for simulation |
| trio | Generate Trio Data Format Suitable for Trio Logic Regression |
| trio.check | Check Case-Parent Trio Data for Mendelian Errors |
| trio.gen.err | Genotype data for trios with Mendelian errors |
| trio.gen1 | Genotype data for trios |
| trio.gen2 | Genotype data for trios with missing genotypes |
| trio.ped.err | Genotype data for pedigrees in the format of a linkage file, with Mendelian errors |
| trio.ped1 | Genotype data for pedigrees in the format of a linkage file |
| trio.ped2 | Genotype data for pedigrees in the format of a linkage file, with missing genotypes |
| trio.sim | Simulate Case-Parent Trios with Population Disease Risk Dependent on SNP-SNP Interaction |