make --no-print-directory -C front-ends Rpwd
make -C ../../include -f Makefile.win version
make Rpwd.exe
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -DR_ARCH='"i386"'  -O3 -Wall -pedantic   -c rpwd.c -o rpwd.o
C:/Rtools/mingw_32/bin/windres    -i rcico.rc -o rcico.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -s  -o Rpwd.exe rpwd.o rcico.o  
cp front-ends/Rpwd.exe Rpwd.exe
-------- Building ../../../library/base/R/Rprofile from ../../library/profile/Common.R ../../library/profile/Rprofile.windows--------
mkdir -p ../../../library/base/R
cp -p html/rwin.html ../../../doc/html/index.html
cp -p ./etc/Makeconf ./etc/Rdevga ./etc/Rprofile.site ./etc/Rcmd_environ ./etc/Rconsole ./etc/rgb.txt ../../../etc
rm -f ../../../etc/Makeconf
mkdir -p ../../../etc//i386
sed -e "s|IMPDIR = bin|IMPDIR = bin/i386|" \
  -e "s/@EOPTS@/-mtune=generic/" \
  -e "s|BINPREF =|BINPREF ?= C:/Rtools/mingw_32/bin/|" \
  -e "s|COMPILED_BY =|COMPILED_BY = gcc-4.9.3|" \
  -e "s|LOCAL_SOFT =|LOCAL_SOFT = C:/projects/BUILD/R-source-win32/extsoft|" \
  -e "s|R_ARCH =|R_ARCH = /i386|" \
  -e "s|DT_ARCH =|DT_ARCH = |" \
  -e "s|RC_ARCH =|RC_ARCH = |" \
  -e "s|M_ARCH =|M_ARCH = |" \
  -e "s|@SYMPAT@|'s/^.* [BCDRT] _/ /p'|" \
  -e "s|@OPENMP@|-fopenmp|" \
  -e "s|@PTHREAD@|-pthread|" \
  -e "s@NM_FILTER =@NM_FILTER = @" \
  etc/Makeconf > ../../../etc/i386/Makeconf
sed -e "s+@BINDIR@+bin/i386+" Makeconf > ../../../Makeconf
cp -p ../CHANGES2 ../CHANGES0 ../CHANGES1 ../../../doc
make[5]: Nothing to be done for 'svnonly'.
installing C headers
make[6]: Nothing to be done for 'svnonly'.
installing C headers
make --no-print-directory -C ../extra/intl CFLAGS='-O3 -Wall -pedantic -mtune=generic' -f Makefile.win
sed -e 's,@''HAVE_POSIX_PRINTF''@,1,g' \
    -e 's,@''HAVE_ASPRINTF''@,0,g' \
    -e 's,@''HAVE_SNPRINTF''@,1,g' \
    -e 's,@''HAVE_WPRINTF''@,0,g' \
  < libgnuintl.h.in > libgnuintl.h
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -DIN_LIBINTL -DHAVE_CONFIG_H -I. -I../../include  -O3 -Wall -pedantic -mtune=generic   -c bindtextdom.c -o bindtextdom.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -DIN_LIBINTL -DHAVE_CONFIG_H -I. -I../../include  -O3 -Wall -pedantic -mtune=generic   -c dcgettext.c -o dcgettext.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -DIN_LIBINTL -DHAVE_CONFIG_H -I. -I../../include  -O3 -Wall -pedantic -mtune=generic   -c dgettext.c -o dgettext.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -DIN_LIBINTL -DHAVE_CONFIG_H -I. -I../../include  -O3 -Wall -pedantic -mtune=generic   -c gettext.c -o gettext.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -DIN_LIBINTL -DHAVE_CONFIG_H -I. -I../../include  -O3 -Wall -pedantic -mtune=generic   -c finddomain.c -o finddomain.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -DIN_LIBINTL -DHAVE_CONFIG_H -I. -I../../include  -O3 -Wall -pedantic -mtune=generic   -c loadmsgcat.c -o loadmsgcat.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -DIN_LIBINTL -DHAVE_CONFIG_H -I. -I../../include  -O3 -Wall -pedantic -mtune=generic   -c textdomain.c -o textdomain.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -DIN_LIBINTL -DHAVE_CONFIG_H -I. -I../../include  -O3 -Wall -pedantic -mtune=generic   -c l10nflist.c -o l10nflist.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -DIN_LIBINTL -DHAVE_CONFIG_H -I. -I../../include  -O3 -Wall -pedantic -mtune=generic   -c explodename.c -o explodename.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -DIN_LIBINTL -DHAVE_CONFIG_H -I. -I../../include -DLOCALEDIR=\"\" -O3 -Wall -pedantic -mtune=generic   -c dcigettext.c -o dcigettext.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -DIN_LIBINTL -DHAVE_CONFIG_H -I. -I../../include  -O3 -Wall -pedantic -mtune=generic   -c dcngettext.c -o dcngettext.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -DIN_LIBINTL -DHAVE_CONFIG_H -I. -I../../include  -O3 -Wall -pedantic -mtune=generic   -c dngettext.c -o dngettext.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -DIN_LIBINTL -DHAVE_CONFIG_H -I. -I../../include  -O3 -Wall -pedantic -mtune=generic   -c ngettext.c -o ngettext.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -DIN_LIBINTL -DHAVE_CONFIG_H -I. -I../../include  -O3 -Wall -pedantic -mtune=generic   -c plural.c -o plural.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -DIN_LIBINTL -DHAVE_CONFIG_H -I. -I../../include  -O3 -Wall -pedantic -mtune=generic   -c plural-exp.c -o plural-exp.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -DIN_LIBINTL -DHAVE_CONFIG_H -I. -I../../include  -O3 -Wall -pedantic -mtune=generic   -c langprefs.c -o langprefs.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -DIN_LIBINTL -DHAVE_CONFIG_H -I. -I../../include  -O3 -Wall -pedantic -mtune=generic   -c localcharset.c -o localcharset.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -DIN_LIBINTL -DHAVE_CONFIG_H -I. -I../../include  -O3 -Wall -pedantic -mtune=generic   -c localename.c -o localename.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -DIN_LIBINTL -DHAVE_CONFIG_H -I. -I../../include  -O3 -Wall -pedantic -mtune=generic   -c printf.c -o printf.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -DIN_LIBINTL -DHAVE_CONFIG_H -I. -I../../include  -O3 -Wall -pedantic -mtune=generic   -c osdep.c -o osdep.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -DIN_LIBINTL -DHAVE_CONFIG_H -I. -I../../include  -O3 -Wall -pedantic -mtune=generic   -c hash-string.c -o hash-string.o
C:/Rtools/mingw_32/bin/ar crs libintl.a bindtextdom.o dcgettext.o dgettext.o gettext.o finddomain.o loadmsgcat.o textdomain.o l10nflist.o explodename.o dcigettext.o dcngettext.o dngettext.o ngettext.o plural.o plural-exp.o langprefs.o localcharset.o localename.o printf.o osdep.o hash-string.o
cp libgnuintl.h libintl.h
make --no-print-directory -C ../appl CFLAGS='-O3 -Wall -pedantic -mtune=generic' FFLAGS='-O3 -mtune=generic' -f Makefile.win
making integrate.d from integrate.c
making interv.d from interv.c
making maxcol.d from maxcol.c
making optim.d from optim.c
making pretty.d from pretty.c
making uncmin.d from uncmin.c
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c integrate.c -o integrate.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c interv.c -o interv.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c maxcol.c -o maxcol.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c optim.c -o optim.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c pretty.c -o pretty.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c uncmin.c -o uncmin.o
C:/Rtools/mingw_32/bin/gfortran  -O3 -mtune=generic  -c dchdc.f -o dchdc.o
C:/Rtools/mingw_32/bin/gfortran  -O3 -mtune=generic  -c dpbfa.f -o dpbfa.o
C:/Rtools/mingw_32/bin/gfortran  -O3 -mtune=generic  -c dpbsl.f -o dpbsl.o
C:/Rtools/mingw_32/bin/gfortran  -O3 -mtune=generic  -c dpoco.f -o dpoco.o
C:/Rtools/mingw_32/bin/gfortran  -O3 -mtune=generic  -c dpodi.f -o dpodi.o
C:/Rtools/mingw_32/bin/gfortran  -O3 -mtune=generic  -c dpofa.f -o dpofa.o
C:/Rtools/mingw_32/bin/gfortran  -O3 -mtune=generic  -c dposl.f -o dposl.o
C:/Rtools/mingw_32/bin/gfortran  -O3 -mtune=generic  -c dqrdc.f -o dqrdc.o
C:/Rtools/mingw_32/bin/gfortran  -O3 -mtune=generic  -c dqrdc2.f -o dqrdc2.o
C:/Rtools/mingw_32/bin/gfortran  -O3 -mtune=generic  -c dqrls.f -o dqrls.o
C:/Rtools/mingw_32/bin/gfortran  -O3 -mtune=generic  -c dqrsl.f -o dqrsl.o
C:/Rtools/mingw_32/bin/gfortran  -O3 -mtune=generic  -c dqrutl.f -o dqrutl.o
C:/Rtools/mingw_32/bin/gfortran  -O3 -mtune=generic  -c dsvdc.f -o dsvdc.o
C:/Rtools/mingw_32/bin/gfortran  -O3 -mtune=generic  -c dtrco.f -o dtrco.o
C:/Rtools/mingw_32/bin/gfortran  -O3 -mtune=generic  -c dtrsl.f -o dtrsl.o
C:/Rtools/mingw_32/bin/ar crs libappl.a integrate.o interv.o maxcol.o optim.o pretty.o uncmin.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o
make --no-print-directory -C ../nmath CFLAGS='-O3 -Wall -pedantic -mtune=generic' FFLAGS='-O3 -mtune=generic' -f Makefile.win
making mlutils.d from mlutils.c
making d1mach.d from d1mach.c
making i1mach.d from i1mach.c
making fmax2.d from fmax2.c
making fmin2.d from fmin2.c
making fprec.d from fprec.c
making fround.d from fround.c
making ftrunc.d from ftrunc.c
making sign.d from sign.c
making fsign.d from fsign.c
making imax2.d from imax2.c
making imin2.d from imin2.c
making chebyshev.d from chebyshev.c
making log1p.d from log1p.c
making lgammacor.d from lgammacor.c
making gammalims.d from gammalims.c
making stirlerr.d from stirlerr.c
making bd0.d from bd0.c
making gamma.d from gamma.c
making lgamma.d from lgamma.c
making gamma_cody.d from gamma_cody.c
making beta.d from beta.c
making lbeta.d from lbeta.c
making polygamma.d from polygamma.c
making cospi.d from cospi.c
making bessel_i.d from bessel_i.c
making bessel_j.d from bessel_j.c
making bessel_k.d from bessel_k.c
making bessel_y.d from bessel_y.c
making choose.d from choose.c
making snorm.d from snorm.c
making sexp.d from sexp.c
making dgamma.d from dgamma.c
making pgamma.d from pgamma.c
making qgamma.d from qgamma.c
making rgamma.d from rgamma.c
making dbeta.d from dbeta.c
making pbeta.d from pbeta.c
making qbeta.d from qbeta.c
making rbeta.d from rbeta.c
making dunif.d from dunif.c
making punif.d from punif.c
making qunif.d from qunif.c
making runif.d from runif.c
making dnorm.d from dnorm.c
making pnorm.d from pnorm.c
making qnorm.d from qnorm.c
making rnorm.d from rnorm.c
making dlnorm.d from dlnorm.c
making plnorm.d from plnorm.c
making qlnorm.d from qlnorm.c
making rlnorm.d from rlnorm.c
making df.d from df.c
making pf.d from pf.c
making qf.d from qf.c
making rf.d from rf.c
making dnf.d from dnf.c
making dt.d from dt.c
making pt.d from pt.c
making qt.d from qt.c
making rt.d from rt.c
making dnt.d from dnt.c
making dchisq.d from dchisq.c
making pchisq.d from pchisq.c
making qchisq.d from qchisq.c
making rchisq.d from rchisq.c
making rnchisq.d from rnchisq.c
making dbinom.d from dbinom.c
making pbinom.d from pbinom.c
making qbinom.d from qbinom.c
making rbinom.d from rbinom.c
making rmultinom.d from rmultinom.c
making dcauchy.d from dcauchy.c
making pcauchy.d from pcauchy.c
making qcauchy.d from qcauchy.c
making rcauchy.d from rcauchy.c
making dexp.d from dexp.c
making pexp.d from pexp.c
making qexp.d from qexp.c
making rexp.d from rexp.c
making dgeom.d from dgeom.c
making pgeom.d from pgeom.c
making qgeom.d from qgeom.c
making rgeom.d from rgeom.c
making dhyper.d from dhyper.c
making phyper.d from phyper.c
making qhyper.d from qhyper.c
making rhyper.d from rhyper.c
making dnbinom.d from dnbinom.c
making pnbinom.d from pnbinom.c
making qnbinom.d from qnbinom.c
making rnbinom.d from rnbinom.c
making dpois.d from dpois.c
making ppois.d from ppois.c
making qpois.d from qpois.c
making rpois.d from rpois.c
making dweibull.d from dweibull.c
making pweibull.d from pweibull.c
making qweibull.d from qweibull.c
making rweibull.d from rweibull.c
making dlogis.d from dlogis.c
making plogis.d from plogis.c
making qlogis.d from qlogis.c
making rlogis.d from rlogis.c
making dnchisq.d from dnchisq.c
making pnchisq.d from pnchisq.c
making qnchisq.d from qnchisq.c
making dnbeta.d from dnbeta.c
making pnbeta.d from pnbeta.c
making qnbeta.d from qnbeta.c
making pnf.d from pnf.c
making pnt.d from pnt.c
making qnf.d from qnf.c
making qnt.d from qnt.c
making ptukey.d from ptukey.c
making qtukey.d from qtukey.c
making toms708.d from toms708.c
making wilcox.d from wilcox.c
making signrank.d from signrank.c
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c mlutils.c -o mlutils.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c d1mach.c -o d1mach.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c i1mach.c -o i1mach.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c fmax2.c -o fmax2.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c fmin2.c -o fmin2.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c fprec.c -o fprec.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c fround.c -o fround.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c ftrunc.c -o ftrunc.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c sign.c -o sign.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c fsign.c -o fsign.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c imax2.c -o imax2.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c imin2.c -o imin2.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c chebyshev.c -o chebyshev.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c log1p.c -o log1p.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c lgammacor.c -o lgammacor.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c gammalims.c -o gammalims.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c stirlerr.c -o stirlerr.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c bd0.c -o bd0.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c gamma.c -o gamma.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c lgamma.c -o lgamma.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c gamma_cody.c -o gamma_cody.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c beta.c -o beta.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c lbeta.c -o lbeta.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c polygamma.c -o polygamma.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c cospi.c -o cospi.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c bessel_i.c -o bessel_i.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c bessel_j.c -o bessel_j.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c bessel_k.c -o bessel_k.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c bessel_y.c -o bessel_y.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c choose.c -o choose.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c snorm.c -o snorm.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c sexp.c -o sexp.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c dgamma.c -o dgamma.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c pgamma.c -o pgamma.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c qgamma.c -o qgamma.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c rgamma.c -o rgamma.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c dbeta.c -o dbeta.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c pbeta.c -o pbeta.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c qbeta.c -o qbeta.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c rbeta.c -o rbeta.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c dunif.c -o dunif.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c punif.c -o punif.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c qunif.c -o qunif.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c runif.c -o runif.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c dnorm.c -o dnorm.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c pnorm.c -o pnorm.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c qnorm.c -o qnorm.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c rnorm.c -o rnorm.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c dlnorm.c -o dlnorm.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c plnorm.c -o plnorm.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c qlnorm.c -o qlnorm.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c rlnorm.c -o rlnorm.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c df.c -o df.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c pf.c -o pf.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c qf.c -o qf.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c rf.c -o rf.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c dnf.c -o dnf.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c dt.c -o dt.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c pt.c -o pt.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c qt.c -o qt.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c rt.c -o rt.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c dnt.c -o dnt.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c dchisq.c -o dchisq.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c pchisq.c -o pchisq.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c qchisq.c -o qchisq.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c rchisq.c -o rchisq.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c rnchisq.c -o rnchisq.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c dbinom.c -o dbinom.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c pbinom.c -o pbinom.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c qbinom.c -o qbinom.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c rbinom.c -o rbinom.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c rmultinom.c -o rmultinom.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c dcauchy.c -o dcauchy.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c pcauchy.c -o pcauchy.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c qcauchy.c -o qcauchy.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c rcauchy.c -o rcauchy.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c dexp.c -o dexp.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c pexp.c -o pexp.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c qexp.c -o qexp.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c rexp.c -o rexp.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c dgeom.c -o dgeom.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c pgeom.c -o pgeom.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c qgeom.c -o qgeom.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c rgeom.c -o rgeom.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c dhyper.c -o dhyper.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c phyper.c -o phyper.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c qhyper.c -o qhyper.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c rhyper.c -o rhyper.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c dnbinom.c -o dnbinom.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c pnbinom.c -o pnbinom.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c qnbinom.c -o qnbinom.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c rnbinom.c -o rnbinom.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c dpois.c -o dpois.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c ppois.c -o ppois.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c qpois.c -o qpois.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c rpois.c -o rpois.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c dweibull.c -o dweibull.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c pweibull.c -o pweibull.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c qweibull.c -o qweibull.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c rweibull.c -o rweibull.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c dlogis.c -o dlogis.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c plogis.c -o plogis.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c qlogis.c -o qlogis.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c rlogis.c -o rlogis.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c dnchisq.c -o dnchisq.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c pnchisq.c -o pnchisq.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c qnchisq.c -o qnchisq.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c dnbeta.c -o dnbeta.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c pnbeta.c -o pnbeta.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c qnbeta.c -o qnbeta.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c pnf.c -o pnf.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c pnt.c -o pnt.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c qnf.c -o qnf.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c qnt.c -o qnt.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c ptukey.c -o ptukey.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c qtukey.c -o qtukey.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c toms708.c -o toms708.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c wilcox.c -o wilcox.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c signrank.c -o signrank.o
C:/Rtools/mingw_32/bin/ar crs libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o
make --no-print-directory -C ../main CFLAGS='-O3 -Wall -pedantic -mtune=generic' FFLAGS='-O3 -mtune=generic' malloc-DEFS='' -f Makefile.win
making CommandLineArgs.d from CommandLineArgs.c
making Rdynload.d from Rdynload.c
making Renviron.d from Renviron.c
making RNG.d from RNG.c
making agrep.d from agrep.c
making altclasses.d from altclasses.c
making altrep.d from altrep.c
making apply.d from apply.c
making arithmetic.d from arithmetic.c
making array.d from array.c
making attrib.d from attrib.c
making bind.d from bind.c
making builtin.d from builtin.c
making character.d from character.c
making coerce.d from coerce.c
making colors.d from colors.c
making complex.d from complex.c
making connections.d from connections.c
making context.d from context.c
making cum.d from cum.c
making dcf.d from dcf.c
making datetime.d from datetime.c
making debug.d from debug.c
making deparse.d from deparse.c
making devices.d from devices.c
making dotcode.d from dotcode.c
making dounzip.d from dounzip.c
making dstruct.d from dstruct.c
making duplicate.d from duplicate.c
making edit.d from edit.c
making engine.d from engine.c
making envir.d from envir.c
making errors.d from errors.c
making eval.d from eval.c
making format.d from format.c
making gevents.d from gevents.c
making gram.d from gram.c
making gram-ex.d from gram-ex.c
making graphics.d from graphics.c
making grep.d from grep.c
making identical.d from identical.c
making inlined.d from inlined.c
making inspect.d from inspect.c
making internet.d from internet.c
making iosupport.d from iosupport.c
making lapack.d from lapack.c
making list.d from list.c
making localecharset.d from localecharset.c
making logic.d from logic.c
making main.d from main.c
making mapply.d from mapply.c
making match.d from match.c
making memory.d from memory.c
making mkdtemp.d from mkdtemp.c
making names.d from names.c
making objects.d from objects.c
making options.d from options.c
making paste.d from paste.c
making platform.d from platform.c
making plot.d from plot.c
making plot3d.d from plot3d.c
making plotmath.d from plotmath.c
making print.d from print.c
making printarray.d from printarray.c
making printvector.d from printvector.c
making printutils.d from printutils.c
making qsort.d from qsort.c
making radixsort.d from radixsort.c
making random.d from random.c
making raw.d from raw.c
making registration.d from registration.c
making relop.d from relop.c
making rlocale.d from rlocale.c
making saveload.d from saveload.c
making scan.d from scan.c
making seq.d from seq.c
making serialize.d from serialize.c
making sort.d from sort.c
making source.d from source.c
making split.d from split.c
making sprintf.d from sprintf.c
making startup.d from startup.c
making subassign.d from subassign.c
making subscript.d from subscript.c
making subset.d from subset.c
making summary.d from summary.c
making sysutils.d from sysutils.c
making times.d from times.c
making unique.d from unique.c
making util.d from util.c
making version.d from version.c
making g_alab_her.d from g_alab_her.c
making g_cntrlify.d from g_cntrlify.c
making g_fontdb.d from g_fontdb.c
making g_her_glyph.d from g_her_glyph.c
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c CommandLineArgs.c -o CommandLineArgs.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c Rdynload.c -o Rdynload.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c Renviron.c -o Renviron.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"' -I../nmath -O3 -Wall -pedantic -mtune=generic   -c RNG.c -o RNG.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"' -I../extra -O3 -Wall -pedantic -mtune=generic   -c agrep.c -o agrep.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c altclasses.c -o altclasses.o
altclasses.c:961:13: warning: 'make_mmap' defined but not used [-Wunused-function]
 static SEXP make_mmap(void *p, SEXP file, size_t size, int type,
             ^
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c altrep.c -o altrep.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c apply.c -o apply.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c arithmetic.c -o arithmetic.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c array.c -o array.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c attrib.c -o attrib.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c bind.c -o bind.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"' -I../gnuwin32 -O3 -Wall -pedantic -mtune=generic   -c builtin.c -o builtin.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c character.c -o character.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c coerce.c -o coerce.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c colors.c -o colors.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c complex.c -o complex.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"' -DLZMA_API_STATIC -I"C:/projects/BUILD/R-source-win32/extsoft"/include -DHAVE_CURL_CURL_H -DHAVE_LIBCURL -O3 -Wall -pedantic -mtune=generic   -c connections.c -o connections.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c context.c -o context.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c cum.c -o cum.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"' -I../extra -O3 -Wall -pedantic -mtune=generic   -c dcf.c -o dcf.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c datetime.c -o datetime.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c debug.c -o debug.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic -Wno-format  -c deparse.c -o deparse.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c devices.c -o devices.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c dotcode.c -o dotcode.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"' -IC:/projects/BUILD/R-source-win32/extsoft/include -O3 -Wall -pedantic -mtune=generic   -c dounzip.c -o dounzip.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c dstruct.c -o dstruct.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c duplicate.c -o duplicate.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"' -I../gnuwin32 -O3 -Wall -pedantic -mtune=generic   -c edit.c -o edit.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c engine.c -o engine.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c envir.c -o envir.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c errors.c -o errors.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c eval.c -o eval.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c format.c -o format.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c gevents.c -o gevents.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c gram.c -o gram.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c gram-ex.c -o gram-ex.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c graphics.c -o graphics.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"' -DPCRE_STATIC -I../extra -I../gnuwin32 -I"C:/projects/BUILD/R-source-win32/extsoft"/include -O3 -Wall -pedantic -mtune=generic   -c grep.c -o grep.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c identical.c -o identical.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c inlined.c -o inlined.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c inspect.c -o inspect.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c internet.c -o internet.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c iosupport.c -o iosupport.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c lapack.c -o lapack.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c list.c -o list.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c localecharset.c -o localecharset.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c logic.c -o logic.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c main.c -o main.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c mapply.c -o mapply.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c match.c -o match.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c memory.c -o memory.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c mkdtemp.c -o mkdtemp.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c names.c -o names.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c objects.c -o objects.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c options.c -o options.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c paste.c -o paste.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"' -I../gnuwin32 -I../extra -DPLATFORM_PKGTYPE='"win.binary"' -DPCRE_STATIC -DLZMA_API_STATIC -I"C:/projects/BUILD/R-source-win32/extsoft"/include -DUSE_ICU -I"C:/Rtools/mingw_libs"/include -DHAVE_CURL_CURL_H -DHAVE_LIBCURL -O3 -Wall -pedantic -mtune=generic   -c platform.c -o platform.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c plot.c -o plot.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c plot3d.c -o plot3d.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c plotmath.c -o plotmath.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c print.c -o print.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c printarray.c -o printarray.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c printvector.c -o printvector.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"' -I../gnuwin32 -O3 -Wall -pedantic -mtune=generic   -c printutils.c -o printutils.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c qsort.c -o qsort.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c radixsort.c -o radixsort.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c random.c -o random.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c raw.c -o raw.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c registration.c -o registration.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c relop.c -o relop.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c rlocale.c -o rlocale.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"' -I../extra/xdr -O3 -Wall -pedantic -mtune=generic   -c saveload.c -o saveload.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c scan.c -o scan.o
scan.c: In function 'scanVector':
scan.c:581:3: warning: unknown conversion type character 'l' in format [-Wformat=]
   sprintf(ConsolePrompt, "%lld: ", (long long) (n + 1));
   ^
scan.c:581:3: warning: too many arguments for format [-Wformat-extra-args]
scan.c: In function 'scanFrame':
scan.c:737:3: warning: unknown conversion type character 'l' in format [-Wformat=]
   sprintf(ConsolePrompt, "%lld: ", (long long) (n + 1));
   ^
scan.c:737:3: warning: too many arguments for format [-Wformat-extra-args]
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c seq.c -o seq.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"' -I../extra/xdr -O3 -Wall -pedantic -mtune=generic   -c serialize.c -o serialize.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c sort.c -o sort.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c source.c -o source.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c split.c -o split.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c sprintf.c -o sprintf.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c startup.c -o startup.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c subassign.c -o subassign.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c subscript.c -o subscript.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c subset.c -o subset.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c summary.c -o summary.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"' -I../gnuwin32 -O3 -Wall -pedantic -mtune=generic   -c sysutils.c -o sysutils.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c times.c -o times.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c unique.c -o unique.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"' -DLZMA_API_STATIC -I"C:/projects/BUILD/R-source-win32/extsoft"/include -DUSE_ICU -I"C:/Rtools/mingw_libs"/include -O3 -Wall -pedantic -mtune=generic   -c util.c -o util.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c version.c -o version.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c g_alab_her.c -o g_alab_her.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c g_cntrlify.c -o g_cntrlify.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c g_fontdb.c -o g_fontdb.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../include -DHAVE_CONFIG_H -DR_DLL_BUILD -DR_ARCH='"i386"'  -O3 -Wall -pedantic -mtune=generic   -c g_her_glyph.c -o g_her_glyph.o
C:/Rtools/mingw_32/bin/gfortran  -O3 -mtune=generic  -c xxxpr.f -o xxxpr.o
C:/Rtools/mingw_32/bin/ar crs libmain.a CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o altclasses.o altrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o mkdtemp.o names.o objects.o options.o paste.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o radixsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o xxxpr.o
make --no-print-directory -C ./getline CFLAGS='-O3 -Wall -pedantic -mtune=generic'
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -DWin32 -I. -I../../include  -O3 -Wall -pedantic -mtune=generic   -c getline.c -o getline.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -DWin32 -I. -I../../include  -O3 -Wall -pedantic -mtune=generic   -c wc_history.c -o wc_history.o
C:/Rtools/mingw_32/bin/ar crs gl.a getline.o wc_history.o
making array.d from array.c
making cursors.d from cursors.c
making printer.d from printer.c
making strings.d from strings.c
making gimage.d from gimage.c
making menus.d from menus.c
making buttons.d from buttons.c
making stdimg.d from stdimg.c
making bitmaps.d from bitmaps.c
making status.d from status.c
making gdraw.d from gdraw.c
making fonts.d from fonts.c
making gbuttons.d from gbuttons.c
making context.d from context.c
making drawtext.d from drawtext.c
making windows.d from windows.c
making drawing.d from drawing.c
making dialogs.d from dialogs.c
making events.d from events.c
making objects.d from objects.c
making gmenus.d from gmenus.c
making init.d from init.c
making controls.d from controls.c
making arith.d from arith.c
making metafile.d from metafile.c
making rgb.d from rgb.c
making gif.d from gif.c
making image.d from image.c
making tooltips.d from tooltips.c
making clipboard.d from clipboard.c
C:/Rtools/mingw_32/bin/dlltool --as C:/Rtools/mingw_32/bin/as  -k  --dllname R.dll --input-def R.def --output-lib libR.dll.a
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c array.c -o array.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c cursors.c -o cursors.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c printer.c -o printer.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c strings.c -o strings.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c gimage.c -o gimage.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c menus.c -o menus.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c buttons.c -o buttons.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c stdimg.c -o stdimg.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c bitmaps.c -o bitmaps.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c status.c -o status.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c gdraw.c -o gdraw.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c fonts.c -o fonts.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c gbuttons.c -o gbuttons.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c context.c -o context.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c drawtext.c -o drawtext.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c windows.c -o windows.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c drawing.c -o drawing.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c dialogs.c -o dialogs.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c events.c -o events.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c objects.c -o objects.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c gmenus.c -o gmenus.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c init.c -o init.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c controls.c -o controls.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c arith.c -o arith.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c metafile.c -o metafile.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c rgb.c -o rgb.o
In file included from ga.h:29:0,
                 from rgb.c:32:
graphapp.h:43:23: note: previous declaration of 'GAbyte' was here
 typedef unsigned char GAbyte;
                       ^
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c gif.c -o gif.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c image.c -o image.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c tooltips.c -o tooltips.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../gnuwin32 -I../../include -DGA_DLL_BUILD -DENABLE_NLS=1  -O3 -Wall -pedantic -mtune=generic   -c clipboard.c -o clipboard.o
C:/Rtools/mingw_32/bin/windres    -i dllversion.rc -o dllversion.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -shared -mwindows -o Rgraphapp.dll Rgraphapp.def array.o cursors.o printer.o strings.o gimage.o menus.o buttons.o stdimg.o bitmaps.o status.o gdraw.o fonts.o gbuttons.o context.o drawtext.o windows.o drawing.o dialogs.o events.o objects.o gmenus.o init.o controls.o arith.o metafile.o rgb.o gif.o image.o tooltips.o clipboard.o dllversion.o -L. -lR -lcomctl32 -limm32 -lmsimg32
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../include -DWIN32 -DHAVE_CONFIG_H  -O3 -Wall -pedantic -mtune=generic   -c xdr.c -o xdr.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../include -DWIN32 -DHAVE_CONFIG_H  -O3 -Wall -pedantic -mtune=generic   -c xdr_float.c -o xdr_float.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../include -DWIN32 -DHAVE_CONFIG_H  -O3 -Wall -pedantic -mtune=generic   -c xdr_stdio.c -o xdr_stdio.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I. -I../../include -DWIN32 -DHAVE_CONFIG_H  -O3 -Wall -pedantic -mtune=generic   -c xdr_mem.c -o xdr_mem.o
C:/Rtools/mingw_32/bin/ar crs libxdr.a xdr.o xdr_float.o xdr_stdio.o xdr_mem.o
make -f Makefile.win makeMakedeps
making regcomp.d from regcomp.c
making regerror.d from regerror.c
making regexec.d from regexec.c
making tre-ast.d from tre-ast.c
making tre-compile.d from tre-compile.c
making tre-match-approx.d from tre-match-approx.c
making tre-match-backtrack.d from tre-match-backtrack.c
making tre-match-parallel.d from tre-match-parallel.c
making tre-mem.d from tre-mem.c
making tre-parse.d from tre-parse.c
making tre-stack.d from tre-stack.c
making xmalloc.d from xmalloc.c
make -f Makefile.win libtre.a
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -I. -DHAVE_CONFIG_H  -O3 -Wall -pedantic -mtune=generic   -c regcomp.c -o regcomp.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -I. -DHAVE_CONFIG_H  -O3 -Wall -pedantic -mtune=generic   -c regerror.c -o regerror.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -I. -DHAVE_CONFIG_H  -O3 -Wall -pedantic -mtune=generic   -c regexec.c -o regexec.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -I. -DHAVE_CONFIG_H  -O3 -Wall -pedantic -mtune=generic   -c tre-ast.c -o tre-ast.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -I. -DHAVE_CONFIG_H  -O3 -Wall -pedantic -mtune=generic   -c tre-compile.c -o tre-compile.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -I. -DHAVE_CONFIG_H  -O3 -Wall -pedantic -mtune=generic   -c tre-match-approx.c -o tre-match-approx.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -I. -DHAVE_CONFIG_H  -O3 -Wall -pedantic -mtune=generic   -c tre-match-backtrack.c -o tre-match-backtrack.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -I. -DHAVE_CONFIG_H  -O3 -Wall -pedantic -mtune=generic   -c tre-match-parallel.c -o tre-match-parallel.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -I. -DHAVE_CONFIG_H  -O3 -Wall -pedantic -mtune=generic   -c tre-mem.c -o tre-mem.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -I. -DHAVE_CONFIG_H  -O3 -Wall -pedantic -mtune=generic   -c tre-parse.c -o tre-parse.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -I. -DHAVE_CONFIG_H  -O3 -Wall -pedantic -mtune=generic   -c tre-stack.c -o tre-stack.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -I. -DHAVE_CONFIG_H  -O3 -Wall -pedantic -mtune=generic   -c xmalloc.c -o xmalloc.o
C:/Rtools/mingw_32/bin/ar crs libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o tre-parse.o tre-stack.o xmalloc.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99    -O3 -Wall -pedantic -mtune=generic   -c compat.c -o compat.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99   -DTRIO_FEATURE_WIDECHAR=1 -O3 -Wall -pedantic -mtune=generic   -c trio.c -o trio.o
C:/Rtools/mingw_32/bin/ar crs libtrio.a compat.o trio.o
making localtime.d from localtime.c
making registryTZ.d from registryTZ.c
making strftime.d from strftime.c
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -I../../main  -O3 -Wall -pedantic -mtune=generic   -c localtime.c -o localtime.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -I../../main  -O3 -Wall -pedantic -mtune=generic   -c registryTZ.c -o registryTZ.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -I../../main  -O3 -Wall -pedantic -mtune=generic   -c strftime.c -o strftime.o
C:/Rtools/mingw_32/bin/ar crs libtz.a localtime.o registryTZ.o strftime.o
installing zoneinfo
making win_iconv.d from win_iconv.c
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include  -O3 -Wall -pedantic -mtune=generic   -c win_iconv.c -o win_iconv.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -shared   -o Riconv.dll Riconv.def win_iconv.o  
making console.d from console.c
making dynload.d from dynload.c
making editor.d from editor.c
making embeddedR.d from embeddedR.c
making extra.d from extra.c
making malloc.d from malloc.c
making opt.d from opt.c
making pager.d from pager.c
making preferences.d from preferences.c
making psignal.d from psignal.c
making rhome.d from rhome.c
making rt_complete.d from rt_complete.c
making rui.d from rui.c
making run.d from run.c
making shext.d from shext.c
making sys-win32.d from sys-win32.c
making system.d from system.c
making dos_wglob.d from dos_wglob.c
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../include -I. -I../extra -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c console.c -o console.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../include -I. -I../extra -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c dynload.c -o dynload.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../include -I. -I../extra -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c editor.c -o editor.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../include -I. -I../extra -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c embeddedR.c -o embeddedR.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../include -I. -I../extra -DHAVE_CONFIG_H -DR_DLL_BUILD -I../library/grDevices/src -O3 -Wall -pedantic -mtune=generic   -c extra.c -o extra.o
In file included from ../extra/graphapp/ga.h:29:0,
                 from extra.c:39:
../extra/graphapp/graphapp.h:43:23: note: previous declaration of 'GAbyte' was here
 typedef unsigned char GAbyte;
                       ^
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../include -I. -I../extra -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c malloc.c -o malloc.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../include -I. -I../extra -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c opt.c -o opt.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../include -I. -I../extra -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c pager.c -o pager.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../include -I. -I../extra -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c preferences.c -o preferences.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../include -I. -I../extra -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c psignal.c -o psignal.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../include -I. -I../extra -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c rhome.c -o rhome.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../include -I. -I../extra -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c rt_complete.c -o rt_complete.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../include -I. -I../extra -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c rui.c -o rui.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../include -I. -I../extra -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c run.c -o run.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../include -I. -I../extra -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c shext.c -o shext.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../include -I. -I../extra -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c sys-win32.c -o sys-win32.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../include -I. -I../extra -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c system.c -o system.o
In file included from ../extra/graphapp/ga.h:29:0,
                 from system.c:31:
../extra/graphapp/graphapp.h:43:23: note: previous declaration of 'GAbyte' was here
 typedef unsigned char GAbyte;
                       ^
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../include -I. -I../extra -DHAVE_CONFIG_H -DR_DLL_BUILD  -O3 -Wall -pedantic -mtune=generic   -c dos_wglob.c -o dos_wglob.o
C:/Rtools/mingw_32/bin/windres   -I../include -i dllversion.rc -o dllversion.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99   -I../include -I. -I../extra -DHAVE_CONFIG_H -DR_DLL_BUILD  -c -o e_pow.o e_pow.S
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -shared -s -mwindows -o R.dll R.def console.o dynload.o editor.o embeddedR.o extra.o malloc.o opt.o pager.o preferences.o psignal.o rhome.o rt_complete.o rui.o run.o shext.o sys-win32.o system.o dos_wglob.o dllversion.o e_pow.o ../main/libmain.a ../appl/libappl.a ../nmath/libnmath.a getline/gl.a ../extra/xdr/libxdr.a ../extra/intl/libintl.a ../extra/trio/libtrio.a ../extra/tzone/libtz.a ../extra/tre/libtre.a -fopenmp -L. -lgfortran -lquadmath -lRblas -L../../bin/i386 -lRgraphapp -lRiconv -lcomctl32 -lwinmm -lversion -L"C:/projects/BUILD/R-source-win32/extsoft"/lib/i386 -lpcre -lz -lbz2 -llzma -L"C:/Rtools/mingw_libs"/lib/i386 -lsicuin -lsicuuc -lsicudt -lstdc++ 
cp R.dll ../../bin/i386
C:/Rtools/mingw_32/bin/gfortran  -O3 -mtune=generic  -c blas.f -o blas.o
C:/Rtools/mingw_32/bin/gfortran  -O3 -mtune=generic  -c cmplxblas.f -o cmplxblas.o
-------- Building ../../../bin/i386/Rblas.dll --------
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -shared  -o ../../../bin/i386/Rblas.dll blas.o cmplxblas.o ../../gnuwin32/dllversion.o Rblas.def -L../../../bin/i386 -lR -lgfortran -lquadmath
make --no-print-directory -C front-ends
making rterm.d from rterm.c
making rgui.d from rgui.c
making Rfe.d from Rfe.c
making RSetReg.d from RSetReg.c
making graphappmain.d from graphappmain.c
making open.d from open.c
making rcmdfn.d from rcmdfn.c
making Renviron.d from Renviron.c
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -DR_ARCH='"i386"'  -O3 -Wall -pedantic   -c graphappmain.c -o graphappmain.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -DR_ARCH='"i386"' -DWin32 -O3 -Wall -pedantic   -c rgui.c -o rgui.o
C:/Rtools/mingw_32/bin/windres    -i rgico.rc -o rgico.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -s -mwindows -Wl,--large-address-aware -Wl,--stack=0x1000000 -o Rgui.exe graphappmain.o rgui.o rgico.o -L../../../bin/i386 -lR -lRgraphapp 
mkdir -p ../../../bin/i386
cp Rgui.exe ../../../bin/i386/Rgui.exe
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -DR_ARCH='"i386"' -DWin32 -O3 -Wall -pedantic   -c rterm.c -o rterm.o
C:/Rtools/mingw_32/bin/windres    -i rtico.rc -o rtico.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -s -Wl,--large-address-aware -Wl,--stack=0x1000000 -o Rterm.exe graphappmain.o rterm.o rtico.o -L../../../bin/i386 -lR -lRgraphapp 
mkdir -p ../../../bin/i386
cp Rterm.exe ../../../bin/i386/Rterm.exe	
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -DR_ARCH='"i386"'  -O3 -Wall -pedantic   -c rcmd.c -o rcmd.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -DR_ARCH='"i386"'  -O3 -Wall -pedantic -DBINDIR='"bin/i386"'  -c rcmdfn.c -o rcmdfn.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -DR_ARCH='"i386"'  -O3 -Wall -pedantic   -c Renviron.c -o Renviron.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -s  -o Rcmd.exe rcmd.o ../rhome.o ../shext.o rcico.o rcmdfn.o Renviron.o  
mkdir -p ../../../bin/i386
cp Rcmd.exe ../../../bin/i386/Rcmd.exe
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -DR_ARCH='"i386"'  -O3 -Wall -pedantic   -c RSetReg.c -o RSetReg.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -s  -o RSetReg.exe RSetReg.o ../rhome.o rcico.o  
mkdir -p ../../../bin/i386
cp RSetReg.exe ../../../bin/i386/RSetReg.exe
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -DR_ARCH='"i386"'  -O3 -Wall -pedantic   -c R.c -o R.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -s  -o R.exe R.o ../rhome.o ../shext.o rcico.o rcmdfn.o Renviron.o  
mkdir -p ../../../bin/i386
cp R.exe ../../../bin/i386/R.exe	
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -O3 -Wall -pedantic -DBINDIR='"bin/i386"' -I. -I../../include -DHAVE_CONFIG_H -c ../../unix/Rscript.c -o Rscript.o
C:/Rtools/mingw_32/bin/windres    -i rsico.rc -o rsico.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -s -Wl,--large-address-aware -Wl,--stack=0x1000000 -o Rscript.exe Rscript.o rsico.o -L../../../bin/i386 -lR -lRgraphapp 
mkdir -p ../../../bin/i386
cp Rscript.exe ../../../bin/i386/Rscript.exe	
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -DR_ARCH='"i386"'  -O3 -Wall -pedantic   -c open.c -o open.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -s  -o open.exe open.o  
mkdir -p ../../../bin/i386
cp open.exe ../../../bin/i386/open.exe	
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -DR_ARCH='"i386"'  -O3 -Wall -pedantic   -c Rfe.c -o Rfe.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -s  -o Rfe.exe Rfe.o ../rhome.o rcico.o  
mkdir -p ../../../bin/i386
cp Rfe.exe ../../../bin/i386/Rfe.exe
mkdir -p ../../../bin
cp Rfe.exe ../../../bin/R.exe	
mkdir -p ../../../bin
cp Rfe.exe ../../../bin/Rscript.exe	
cat ../../doc/COPYRIGHTS COPYRIGHTS.win > COPYRIGHTS
make --no-print-directory -C ../modules -f Makefile.win \
  CFLAGS='-O3 -Wall -pedantic -mtune=generic' FFLAGS='-O3 -mtune=generic'
making internet.d from internet.c
making libcurl.d from libcurl.c
making nanoftp.d from nanoftp.c
making nanohttp.d from nanohttp.c
making sockconn.d from sockconn.c
making Rsock.d from Rsock.c
making sock.d from sock.c
making Rhttpd.d from Rhttpd.c
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -I../../extra/graphapp -DHAVE_CONFIG_H  -O3 -Wall -pedantic -mtune=generic   -c internet.c -o internet.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -I../../extra/graphapp -DHAVE_CONFIG_H -DHAVE_CURL_CURL_H -DHAVE_LIBCURL -DCURL_STATICLIB -I"C:/projects/BUILD/R-source-win32/libcurl"/include -O3 -Wall -pedantic -mtune=generic   -c libcurl.c -o libcurl.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -I../../extra/graphapp -DHAVE_CONFIG_H  -O3 -Wall -pedantic -mtune=generic   -c nanoftp.c -o nanoftp.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -I../../extra/graphapp -DHAVE_CONFIG_H  -O3 -Wall -pedantic -mtune=generic   -c nanohttp.c -o nanohttp.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -I../../extra/graphapp -DHAVE_CONFIG_H  -O3 -Wall -pedantic -mtune=generic   -c sockconn.c -o sockconn.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -I../../extra/graphapp -DHAVE_CONFIG_H  -O3 -Wall -pedantic -mtune=generic   -c Rhttpd.c -o Rhttpd.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -I../../extra/graphapp -DHAVE_CONFIG_H  -O3 -Wall -pedantic -mtune=generic   -c Rsock.c -o Rsock.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -I../../extra/graphapp -DHAVE_CONFIG_H  -O3 -Wall -pedantic -mtune=generic   -c sock.c -o sock.o
C:/Rtools/mingw_32/bin/windres    -i dllversion.rc -o dllversion.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -shared  -o ../../../modules/i386/internet.dll internet.o libcurl.o nanoftp.o nanohttp.o sockconn.o Rhttpd.o Rsock.o sock.o dllversion.o internet.def -L../../../bin/i386 -lR -lRgraphapp -lwininet -lws2_32 -L"C:/projects/BUILD/R-source-win32/libcurl"/lib/i386 -lcurl-dualssl -lssh2 -lz -lssl -lcrypto -lgdi32 -lws2_32 -lcrypt32 -lwldap32
making Lapack.d from Lapack.c
C:/Rtools/mingw_32/bin/gfortran  -O3 -mtune=generic -ffloat-store -c dlamch.f -o dlamch.o
C:/Rtools/mingw_32/bin/gfortran  -O3 -mtune=generic  -c dlapack.f -o dlapack.o
C:/Rtools/mingw_32/bin/gfortran  -O3 -mtune=generic  -c cmplx.f -o cmplx.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -DHAVE_CONFIG_H  -O3 -Wall -pedantic -mtune=generic   -c init_win.c -o init_win.o
C:/Rtools/mingw_32/bin/windres    -i Rlapackrc.rc -o Rlapackrc.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -shared -s -o ../../../bin/i386/Rlapack.dll dlamch.o dlapack.o cmplx.o init_win.o Rlapackrc.o -L../../../bin/i386 -lR -lRblas -lgfortran -lquadmath
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -I../../include -DHAVE_CONFIG_H  -O3 -Wall -pedantic -mtune=generic   -c Lapack.c -o Lapack.o
C:/Rtools/mingw_32/bin/windres    -i dllversion.rc -o dllversion.o
C:/Rtools/mingw_32/bin/gcc -std=gnu99  -shared -s  -o lapack.dll lapack.def Lapack.o dllversion.o -L../../../bin/i386 -lRlapack -lRblas -lR 
cp lapack.dll ../../../modules/i386/lapack.dll
building package 'base'
building package 'tools'
making text.d from text.c
making init.d from init.c
making Rmd5.d from Rmd5.c
making md5.d from md5.c
making signals.d from signals.c
making install.d from install.c
making getfmts.d from getfmts.c
making http.d from http.c
making gramLatex.d from gramLatex.c
making gramRd.d from gramRd.c
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c text.c -o text.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c init.c -o init.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c Rmd5.c -o Rmd5.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c md5.c -o md5.o
md5.c: In function 'md5_finish_ctx':
md5.c:102:3: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
   *(md5_uint32 *) &ctx->buffer[bytes + pad] = SWAP (ctx->total[0] << 3);
   ^
md5.c:103:3: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
   *(md5_uint32 *) &ctx->buffer[bytes + pad + 4] = SWAP ((ctx->total[1] << 3) |
   ^
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c signals.c -o signals.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c install.c -o install.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c getfmts.c -o getfmts.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c http.c -o http.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c gramLatex.c -o gramLatex.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c gramRd.c -o gramRd.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o tools.dll tmp.def text.o init.o Rmd5.o md5.o signals.o install.o getfmts.o http.o gramLatex.o gramRd.o ../../../gnuwin32/dllversion.o -LC:/projects/BUILD/R-source-win32/extsoft/lib/i386 -LC:/projects/BUILD/R-source-win32/extsoft/lib -L../../../../bin/i386 -lR
installing 'sysdata.rda'
building package 'compiler'
byte-compiling package 'compiler'
byte-compiling package 'base'
byte-compiling package 'tools'
building package 'utils'
making init.d from init.c
making io.d from io.c
making size.d from size.c
making sock.d from sock.c
making stubs.d from stubs.c
making utils.d from utils.c
making windows/dataentry.d from windows/dataentry.c
making windows/dialogs.d from windows/dialogs.c
making windows/registry.d from windows/registry.c
making windows/util.d from windows/util.c
making windows/widgets.d from windows/widgets.c
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I../../../../src/gnuwin32 -I../../../../src/extra -I../../../../src/library/grDevices/src -DLZMA_API_STATIC -IC:/projects/BUILD/R-source-win32/extsoft/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c init.c -o init.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I../../../../src/gnuwin32 -I../../../../src/extra -I../../../../src/library/grDevices/src -DLZMA_API_STATIC -IC:/projects/BUILD/R-source-win32/extsoft/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c io.c -o io.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I../../../../src/gnuwin32 -I../../../../src/extra -I../../../../src/library/grDevices/src -DLZMA_API_STATIC -IC:/projects/BUILD/R-source-win32/extsoft/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c size.c -o size.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I../../../../src/gnuwin32 -I../../../../src/extra -I../../../../src/library/grDevices/src -DLZMA_API_STATIC -IC:/projects/BUILD/R-source-win32/extsoft/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c sock.c -o sock.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I../../../../src/gnuwin32 -I../../../../src/extra -I../../../../src/library/grDevices/src -DLZMA_API_STATIC -IC:/projects/BUILD/R-source-win32/extsoft/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c stubs.c -o stubs.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I../../../../src/gnuwin32 -I../../../../src/extra -I../../../../src/library/grDevices/src -DLZMA_API_STATIC -IC:/projects/BUILD/R-source-win32/extsoft/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c utils.c -o utils.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I../../../../src/gnuwin32 -I../../../../src/extra -I../../../../src/library/grDevices/src -DLZMA_API_STATIC -IC:/projects/BUILD/R-source-win32/extsoft/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c windows/dataentry.c -o windows/dataentry.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I../../../../src/gnuwin32 -I../../../../src/extra -I../../../../src/library/grDevices/src -DLZMA_API_STATIC -IC:/projects/BUILD/R-source-win32/extsoft/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c windows/dialogs.c -o windows/dialogs.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I../../../../src/gnuwin32 -I../../../../src/extra -I../../../../src/library/grDevices/src -DLZMA_API_STATIC -IC:/projects/BUILD/R-source-win32/extsoft/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c windows/registry.c -o windows/registry.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I../../../../src/gnuwin32 -I../../../../src/extra -I../../../../src/library/grDevices/src -DLZMA_API_STATIC -IC:/projects/BUILD/R-source-win32/extsoft/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c windows/util.c -o windows/util.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I../../../../src/gnuwin32 -I../../../../src/extra -I../../../../src/library/grDevices/src -DLZMA_API_STATIC -IC:/projects/BUILD/R-source-win32/extsoft/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c windows/widgets.c -o windows/widgets.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o utils.dll tmp.def init.o io.o size.o sock.o stubs.o utils.o windows/dataentry.o windows/dialogs.o windows/registry.o windows/util.o windows/widgets.o ../../../gnuwin32/dllversion.o -lRgraphapp -lVersion -LC:/projects/BUILD/R-source-win32/extsoft/lib/i386 -llzma -LC:/projects/BUILD/R-source-win32/extsoft/lib/i386 -LC:/projects/BUILD/R-source-win32/extsoft/lib -L../../../../bin/i386 -lR
installing 'sysdata.rda'
byte-compiling package 'utils'
building package 'grDevices'
making axis_scales.d from axis_scales.c
making chull.d from chull.c
making devices.d from devices.c
making init.d from init.c
making stubs.d from stubs.c
making colors.d from colors.c
making devPicTeX.d from devPicTeX.c
making devPS.d from devPS.c
making devWindows.d from devWindows.c
making winbitmap.d from winbitmap.c
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c axis_scales.c -o axis_scales.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c chull.c -o chull.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c devices.c -o devices.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c init.c -o init.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c stubs.c -o stubs.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c colors.c -o colors.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c devPicTeX.c -o devPicTeX.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H   -I"C:/projects/BUILD/R-source-win32/extsoft" -I../../../../src/gnuwin32 -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c devPS.c -o devPS.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H   -I../../../../src/gnuwin32 -I../../../../src/extra -DR_ARCH='"i386"' -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c devWindows.c -o devWindows.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H   -DHAVE_PNG -DHAVE_JPEG -DHAVE_TIFF -I"C:/projects/BUILD/R-source-win32/extsoft" -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c winbitmap.c -o winbitmap.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o grDevices.dll tmp.def axis_scales.o chull.o devices.o init.o stubs.o colors.o devPicTeX.o devPS.o devWindows.o winbitmap.o ../../../gnuwin32/dllversion.o -LC:/projects/BUILD/R-source-win32/extsoft/lib/i386 -lRgraphapp -lpng -ltiff -ljpeg -lz -LC:/projects/BUILD/R-source-win32/extsoft/lib/i386 -LC:/projects/BUILD/R-source-win32/extsoft/lib -L../../../../bin/i386 -lR
byte-compiling package 'grDevices'
building package 'graphics'
making init.d from init.c
making base.d from base.c
making graphics.d from graphics.c
making par.d from par.c
making plot.d from plot.c
making plot3d.d from plot3d.c
making stem.d from stem.c
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c init.c -o init.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c base.c -o base.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c graphics.c -o graphics.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c par.c -o par.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c plot.c -o plot.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c plot3d.c -o plot3d.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c stem.c -o stem.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o graphics.dll tmp.def init.o base.o graphics.o par.o plot.o plot3d.o stem.o ../../../gnuwin32/dllversion.o -LC:/projects/BUILD/R-source-win32/extsoft/lib/i386 -LC:/projects/BUILD/R-source-win32/extsoft/lib -L../../../../bin/i386 -lR
byte-compiling package 'graphics'
building package 'stats'
making init.d from init.c
making kmeans.d from kmeans.c
making ansari.d from ansari.c
making bandwidths.d from bandwidths.c
making chisqsim.d from chisqsim.c
making d2x2xk.d from d2x2xk.c
making fexact.d from fexact.c
making kendall.d from kendall.c
making ks.d from ks.c
making line.d from line.c
making smooth.d from smooth.c
making prho.d from prho.c
making swilk.d from swilk.c
making ksmooth.d from ksmooth.c
making loessc.d from loessc.c
making monoSpl.d from monoSpl.c
making isoreg.d from isoreg.c
making Srunmed.d from Srunmed.c
making dblcen.d from dblcen.c
making distance.d from distance.c
making hclust-utils.d from hclust-utils.c
making nls.d from nls.c
making rWishart.d from rWishart.c
making HoltWinters.d from HoltWinters.c
making PPsum.d from PPsum.c
making arima.d from arima.c
making burg.d from burg.c
making filter.d from filter.c
making mAR.d from mAR.c
making pacf.d from pacf.c
making starma.d from starma.c
making port.d from port.c
making family.d from family.c
making sbart.d from sbart.c
making approx.d from approx.c
making loglin.d from loglin.c
making lowess.d from lowess.c
making massdist.d from massdist.c
making splines.d from splines.c
making lm.d from lm.c
making complete_cases.d from complete_cases.c
making cov.d from cov.c
making deriv.d from deriv.c
making fft.d from fft.c
making fourier.d from fourier.c
making model.d from model.c
making optim.d from optim.c
making optimize.d from optimize.c
making integrate.d from integrate.c
making random.d from random.c
making distn.d from distn.c
making zeroin.d from zeroin.c
making rcont.d from rcont.c
making influence.d from influence.c
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c init.c -o init.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c kmeans.c -o kmeans.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ansari.c -o ansari.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c bandwidths.c -o bandwidths.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c chisqsim.c -o chisqsim.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c d2x2xk.c -o d2x2xk.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c fexact.c -o fexact.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c kendall.c -o kendall.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ks.c -o ks.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c line.c -o line.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c smooth.c -o smooth.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c prho.c -o prho.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c swilk.c -o swilk.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ksmooth.c -o ksmooth.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c loessc.c -o loessc.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c monoSpl.c -o monoSpl.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c isoreg.c -o isoreg.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c Srunmed.c -o Srunmed.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c dblcen.c -o dblcen.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c distance.c -o distance.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c hclust-utils.c -o hclust-utils.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c nls.c -o nls.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c rWishart.c -o rWishart.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c HoltWinters.c -o HoltWinters.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c PPsum.c -o PPsum.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c arima.c -o arima.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c burg.c -o burg.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c filter.c -o filter.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c mAR.c -o mAR.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c pacf.c -o pacf.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c starma.c -o starma.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c port.c -o port.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c family.c -o family.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c sbart.c -o sbart.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c approx.c -o approx.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c loglin.c -o loglin.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c lowess.c -o lowess.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c massdist.c -o massdist.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c splines.c -o splines.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c lm.c -o lm.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c complete_cases.c -o complete_cases.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c cov.c -o cov.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c deriv.c -o deriv.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c fft.c -o fft.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c fourier.c -o fourier.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c model.c -o model.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c optim.c -o optim.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c optimize.c -o optimize.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c integrate.c -o integrate.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c random.c -o random.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c distn.c -o distn.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c zeroin.c -o zeroin.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c rcont.c -o rcont.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -DHAVE_CONFIG_H -I../../../../src/include    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c influence.c -o influence.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c bsplvd.f -o bsplvd.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c bvalue.f -o bvalue.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c bvalus.f -o bvalus.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c loessf.f -o loessf.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c ppr.f -o ppr.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c qsbart.f -o qsbart.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c sgram.f -o sgram.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c sinerp.f -o sinerp.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c sslvrg.f -o sslvrg.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c stxwx.f -o stxwx.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c hclust.f -o hclust.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c kmns.f -o kmns.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c eureka.f -o eureka.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c stl.f -o stl.o
C:/Rtools/mingw_32/bin/gfortran  -O2 -msse2 -mfpmath=sse -c portsrc.f -o portsrc.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c lminfl.f -o lminfl.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o stats.dll stats-win.def init.o kmeans.o ansari.o bandwidths.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o line.o smooth.o prho.o swilk.o ksmooth.o loessc.o monoSpl.o isoreg.o Srunmed.o dblcen.o distance.o hclust-utils.o nls.o rWishart.o HoltWinters.o PPsum.o arima.o burg.o filter.o mAR.o pacf.o starma.o port.o family.o sbart.o approx.o loglin.o lowess.o massdist.o splines.o lm.o complete_cases.o cov.o deriv.o fft.o fourier.o model.o optim.o optimize.o integrate.o random.o distn.o zeroin.o rcont.o influence.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o sgram.o sinerp.o sslvrg.o stxwx.o hclust.o kmns.o eureka.o stl.o portsrc.o lminfl.o ../../../gnuwin32/dllversion.o -L../../../../bin/i386 -lRlapack -L../../../../bin/i386 -lRblas -lgfortran -lm -lquadmath -LC:/projects/BUILD/R-source-win32/extsoft/lib/i386 -LC:/projects/BUILD/R-source-win32/extsoft/lib -L../../../../bin/i386 -lR
byte-compiling package 'stats'
building package 'datasets'
building package 'methods'
making do_substitute_direct.d from do_substitute_direct.c
making init.d from init.c
making methods_list_dispatch.d from methods_list_dispatch.c
making slot.d from slot.c
making class_support.d from class_support.c
making tests.d from tests.c
making utils.d from utils.c
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c do_substitute_direct.c -o do_substitute_direct.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c init.c -o init.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c methods_list_dispatch.c -o methods_list_dispatch.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c slot.c -o slot.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c class_support.c -o class_support.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c tests.c -o tests.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I../../../../src/include -DHAVE_CONFIG_H    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c utils.c -o utils.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o methods.dll tmp.def do_substitute_direct.o init.o methods_list_dispatch.o slot.o class_support.o tests.o utils.o ../../../gnuwin32/dllversion.o -LC:/projects/BUILD/R-source-win32/extsoft/lib/i386 -LC:/projects/BUILD/R-source-win32/extsoft/lib -L../../../../bin/i386 -lR
byte-compiling 'methods'
initializing class and method definitions ... done
building package 'grid'
making gpar.d from gpar.c
making grid.d from grid.c
making just.d from just.c
making layout.d from layout.c
making matrix.d from matrix.c
making register.d from register.c
making state.d from state.c
making unit.d from unit.c
making util.d from util.c
making viewport.d from viewport.c
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c gpar.c -o gpar.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c grid.c -o grid.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c just.c -o just.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c layout.c -o layout.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c matrix.c -o matrix.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c register.c -o register.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c state.c -o state.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c unit.c -o unit.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c util.c -o util.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c viewport.c -o viewport.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o grid.dll grid-win.def gpar.o grid.o just.o layout.o matrix.o register.o state.o unit.o util.o viewport.o ../../../gnuwin32/dllversion.o -LC:/projects/BUILD/R-source-win32/extsoft/lib/i386 -LC:/projects/BUILD/R-source-win32/extsoft/lib -L../../../../bin/i386 -lR
byte-compiling package 'grid'
building package 'splines'
making splines.d from splines.c
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c splines.c -o splines.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o splines.dll tmp.def splines.o ../../../gnuwin32/dllversion.o -LC:/projects/BUILD/R-source-win32/extsoft/lib/i386 -LC:/projects/BUILD/R-source-win32/extsoft/lib -L../../../../bin/i386 -lR
byte-compiling package 'splines'
building package 'stats4'
byte-compiling package 'stats4'
building package 'tcltk'
making init.d from init.c
making tcltk.d from tcltk.c
making tcltk_win.d from tcltk_win.c
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I "../../../../Tcl"/include -DWin32 -I../../../../src/include -DHAVE_CONFIG_H    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c init.c -o init.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I "../../../../Tcl"/include -DWin32 -I../../../../src/include -DHAVE_CONFIG_H    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c tcltk.c -o tcltk.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG -I "../../../../Tcl"/include -DWin32 -I../../../../src/include -DHAVE_CONFIG_H    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c tcltk_win.c -o tcltk_win.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o tcltk.dll tmp.def init.o tcltk.o tcltk_win.o ../../../gnuwin32/dllversion.o -L../../../../Tcl/bin -ltcl86 -ltk86 -LC:/projects/BUILD/R-source-win32/extsoft/lib/i386 -LC:/projects/BUILD/R-source-win32/extsoft/lib -L../../../../bin/i386 -lR
byte-compiling package 'tcltk'
building package 'parallel'
making init.d from init.c
making rngstream.d from rngstream.c
making ncpus.d from ncpus.c
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c init.c -o init.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c rngstream.c -o rngstream.o
C:/Rtools/mingw_32/bin/gcc  -I"../../../../include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ncpus.c -o ncpus.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o parallel.dll tmp.def init.o rngstream.o ncpus.o ../../../gnuwin32/dllversion.o -LC:/projects/BUILD/R-source-win32/extsoft/lib/i386 -LC:/projects/BUILD/R-source-win32/extsoft/lib -L../../../../bin/i386 -lR
byte-compiling package 'parallel'
building package 'translations'
installing parsed NAMESPACE files
installing parsed Rd: base stats utils methods graphics grDevices datasets grid tools tcltk splines stats4 compiler parallel
building/updating package metadata ...
writing indices for package: base tools utils grDevices graphics stats datasets methods grid splines stats4 tcltk compiler parallel
building all R object docs
  converting help for package 'base'
    abbreviate                              html  
    agrep                                   html  
    all.equal                               html  
    all                                     html  
    allnames                                html  
    any                                     html  
    aperm                                   html  
    append                                  html  
    apply                                   html  
    args                                    html  
    Arithmetic                              html  
Rd warning: C:/projects/BUILD/R-source-win32/src/library/base/man/Arithmetic.Rd:158: file link 'Ops' in package 'base' does not exist and so has been treated as a topic
    array                                   html  
    as.data.frame                           html  
    as.Date                                 html  
    as.environment                          html  
    as.function                             html  
    as.POSIXlt                              html  
Rd warning: C:/projects/BUILD/R-source-win32/src/library/base/man/as.POSIXlt.Rd:141: file link 'format.POSIXlt' in package 'base' does not exist and so has been treated as a topic
    AsIs                                    html  
    asplit                                  html  
    assign                                  html  
    assignOps                               html  
    attach                                  html  
    attr                                    html  
    attributes                              html  
    autoload                                html  
    backsolve                               html  
    base-defunct                            html  
    base-deprecated                         html  
    base-internal                           html  
    base-package                            html  
    basename                                html  
    Bessel                                  html  
    bincode                                 html  
    bindenv                                 html  
    bitwise                                 html  
    body                                    html  
    bquote                                  html  
    browser                                 html  
    browserText                             html  
    builtins                                html  
    by                                      html  
    c                                       html  
    call                                    html  
    callCC                                  html  
    CallExternal                            html  
    capabilities                            html  
    cat                                     html  
    cbind                                   html  
    char.expand                             html  
    character                               html  
    charmatch                               html  
    chartr                                  html  
    chkDots                                 html  
    chol                                    html  
    chol2inv                                html  
    class                                   html  
    col                                     html  
    colnames                                html  
    Colon                                   html  
    colSums                                 html  
    commandArgs                             html  
    comment                                 html  
    Comparison                              html  
Rd warning: C:/projects/BUILD/R-source-win32/src/library/base/man/Comparison.Rd:101: file link 'Ops' in package 'base' does not exist and so has been treated as a topic
    complex                                 html  
    conditions                              html  
    conflicts                               html  
    connections                             html  
    Constants                               html  
    contributors                            html  
    Control                                 html  
    copyright                               html  
    crossprod                               html  
    Cstack_info                             html  
    cumsum                                  html  
    curlGetHeaders                          html  
    cut.POSIXt                              html  
    cut                                     html  
    data.class                              html  
    data.frame                              html  
    data.matrix                             html  
    dataframeHelpers                        html  
    date                                    html  
    Dates                                   html  
    DateTimeClasses                         html  
    dcf                                     html  
    debug                                   html  
Rd warning: C:/projects/BUILD/R-source-win32/src/library/base/man/debug.Rd:73: file link 'isRematched' in package 'methods' does not exist and so has been treated as a topic
    Defunct                                 html  
    delayedAssign                           html  
    deparse                                 html  
    deparseOpts                             html  
    Deprecated                              html  
    det                                     html  
    detach                                  html  
    dev                                     html  
    diag                                    html  
    diff                                    html  
    difftime                                html  
    dim                                     html  
    dimnames                                html  
    do.call                                 html  
    dontCheck                               html  
    dots                                    html  
    double                                  html  
    dput                                    html  
    drop                                    html  
    droplevels                              html  
    dump                                    html  
    duplicated                              html  
    dynload                                 html  
    eapply                                  html  
    eigen                                   html  
    encodeString                            html  
    Encoding                                html  
    environment                             html  
    EnvVar                                  html  
    eval                                    html  
    exists                                  html  
    expand.grid                             html  
    expression                              html  
    Extract.data.frame                      html  
    Extract.factor                          html  
    Extract                                 html  
    Extremes                                html  
    extSoftVersion                          html  
    factor                                  html  
    file.access                             html  
    file.choose                             html  
    file.info                               html  
    file.path                               html  
    file.show                               html  
    files                                   html  
    files2                                  html  
    find.package                            html  
    findInterval                            html  
    force                                   html  
    forceAndCall                            html  
    Foreign-internal                        html  
    Foreign                                 html  
    formals                                 html  
    format.info                             html  
    format.pval                             html  
    format                                  html  
    formatc                                 html  
    formatDL                                html  
    function                                html  
    funprog                                 html  
    gc                                      html  
    gc.time                                 html  
    gctorture                               html  
    get                                     html  
    getCallingDLL                           html  
    getDLLRegisteredRoutines                html  
    getLoadedDLLs                           html  
    getNativeSymbolInfo                     html  
    gettext                                 html  
    getwd                                   html  
    gl                                      html  
    grep                                    html  
    grepRaw                                 html  
    groupGeneric                            html  
    grouping                                html  
    gzcon                                   html  
    hexmode                                 html  
    Hyperbolic                              html  
    iconv                                   html  
    icuSetCollate                           html  
    identical                               html  
    identity                                html  
    ifelse                                  html  
    integer                                 html  
    interaction                             html  
    interactive                             html  
    Internal                                html  
    InternalMethods                         html  
    invisible                               html  
    is.finite                               html  
    is.function                             html  
    is.language                             html  
    is.object                               html  
    is.recursive                            html  
    is.single                               html  
    is.unsorted                             html  
    ISOdatetime                             html  
    isR                                     html  
    isS4                                    html  
    isSymmetric                             html  
    jitter                                  html  
    kappa                                   html  
    kronecker                               html  
    l10n_info                               html  
    La_library                              html  
    La_version                              html  
    labels                                  html  
    lapply                                  html  
    Last.value                              html  
    lazyload                                html  
    length                                  html  
    lengths                                 html  
    levels                                  html  
    libcurlVersion                          html  
    libPaths                                html  
    library.dynam                           html  
    library                                 html  
    license                                 html  
    list.files                              html  
    list                                    html  
    list2env                                html  
    load                                    html  
    locales                                 html  
    Log                                     html  
    Logic                                   html  
Rd warning: C:/projects/BUILD/R-source-win32/src/library/base/man/Logic.Rd:110: file link 'Ops' in package 'base' does not exist and so has been treated as a topic
    logical                                 html  
    LongVectors                             html  
    lower.tri                               html  
    ls                                      html  
    make.names                              html  
    make.unique                             html  
    mapply                                  html  
    margin.table                            html  
    mat.or.vec                              html  
    match.arg                               html  
    match.call                              html  
    match.fun                               html  
    match                                   html  
    MathFun                                 html  
    matmult                                 html  
    matrix                                  html  
    maxCol                                  html  
    mean                                    html  
    memCompress                             html  
    memlimits                               html  
    Memory-limits                           html  
    memory.profile                          html  
    Memory                                  html  
    merge                                   html  
    message                                 html  
    missing                                 html  
    mode                                    html  
    NA                                      html  
    name                                    html  
    names                                   html  
    nargs                                   html  
    nchar                                   html  
    nlevels                                 html  
    noquote                                 html  
    norm                                    html  
    normalizePath                           html  
    notyet                                  html  
    nrow                                    html  
    ns-dblcolon                             html  
    ns-hooks                                html  
    ns-internal                             html  
    ns-load                                 html  
    ns-reflect                              html  
    ns-topenv                               html  
    NULL                                    html  
    numeric                                 html  
    numeric_version                         html  
    NumericConstants                        html  
    octmode                                 html  
    on.exit                                 html  
    Ops.Date                                html  
    options                                 html  
    order                                   html  
    outer                                   html  
    Paren                                   html  
    parse                                   html  
    paste                                   html  
    path.expand                             html  
    pcre_config                             html  
    Platform                                html  
    pmatch                                  html  
    polyroot                                html  
    pos.to.env                              html  
    pretty                                  html  
    Primitive                               html  
    print.dataframe                         html  
    print.default                           html  
    print                                   html  
Rd warning: C:/projects/BUILD/R-source-win32/src/library/base/man/print.Rd:86: file link '.print.via.format' in package 'tools' does not exist and so has been treated as a topic
    prmatrix                                html  
    proc.time                               html  
    prod                                    html  
    prop.table                              html  
    pushBack                                html  
    qr                                      html  
    qraux                                   html  
    quit                                    html  
    Quotes                                  html  
    Random-user                             html  
    Random                                  html  
    range                                   html  
    rank                                    html  
    rapply                                  html  
    raw                                     html  
    rawConnection                           html  
    rawConversion                           html  
    RdUtils                                 html  
    readBin                                 html  
    readChar                                html  
    readline                                html  
    readLines                               html  
    readRDS                                 html  
    readRenviron                            html  
    Recall                                  html  
    reg.finalizer                           html  
    regex                                   html  
    regmatches                              html  
    rep                                     html  
    replace                                 html  
    Reserved                                html  
    rev                                     html  
    Rhome                                   html  
    rle                                     html  
    rm                                      html  
    round.POSIXt                            html  
    Round                                   html  
    row.names                               html  
    row                                     html  
    rowsum                                  html  
    sample                                  html  
    save                                    html  
    scale                                   html  
    scan                                    html  
    search                                  html  
    seek                                    html  
    seq.Date                                html  
    seq.POSIXt                              html  
    seq                                     html  
    sequence                                html  
    serialize                               html  
    sets                                    html  
    setTimeLimit                            html  
    showConnections                         html  
    shQuote                                 html  
    sign                                    html  
    sink                                    html  
    slice.index                             html  
    slotOp                                  html  
    socketSelect                            html  
    solve                                   html  
    sort                                    html  
    source                                  html  
    Special                                 html  
    split                                   html  
    sprintf                                 html  
    sQuote                                  html  
    srcfile                                 html  
    standardGeneric                         html  
    startsWith                              html  
    Startup                                 html  
    stop                                    html  
    stopifnot                               html  
    strptime                                html  
    strrep                                  html  
    strsplit                                html  
    strtoi                                  html  
    strtrim                                 html  
    structure                               html  
    strwrap                                 html  
    subset                                  html  
    substitute                              html  
    substr                                  html  
    sum                                     html  
    summary                                 html  
    svd                                     html  
    sweep                                   html  
    switch                                  html  
    Syntax                                  html  
    Sys.getenv                              html  
    Sys.getpid                              html  
    Sys.glob                                html  
    Sys.info                                html  
    Sys.localeconv                          html  
    sys.parent                              html  
    Sys.readlink                            html  
    Sys.setenv                              html  
    Sys.setFileTime                         html  
    Sys.sleep                               html  
    sys.source                              html  
    Sys.time                                html  
    Sys.which                               html  
    system.file                             html  
    system                                  html  
    system.time                             html  
    system2                                 html  
    t                                       html  
    table                                   html  
    tabulate                                html  
    tapply                                  html  
    taskCallback                            html  
    taskCallbackManager                     html  
    taskCallbackNames                       html  
    tempfile                                html  
    textconnections                         html  
    tilde                                   html  
    timezones                               html  
    toString                                html  
    trace                                   html  
    traceback                               html  
    tracemem                                html  
    transform                               html  
    Trig                                    html  
    trimws                                  html  
    try                                     html  
    typeof                                  html  
    unique                                  html  
    unlink                                  html  
    unlist                                  html  
    unname                                  html  
    UseMethod                               html  
    userhooks                               html  
    utf8Conversion                          html  
    validUTF8                               html  
    vector                                  html  
    Vectorize                               html  
    Version                                 html  
    warning                                 html  
    warnings                                html  
    weekday.POSIXt                          html  
    which.min                               html  
    which                                   html  
    with                                    html  
    withVisible                             html  
    write                                   html  
    writeLines                              html  
    xtfrm                                   html  
    zapsmall                                html  
    zMachine                                html  
    zpackages                               html  
    zScript                                 html  
    zutils                                  html  
    shell.exec                              html  
    shell                                   html  
  converting help for package 'tools'
    add_datalist                            html  
    assertCondition                         html  
    bibstyle                                html  
    buildVignette                           html  
    buildVignettes                          html  
    charsets                                html  
    check_packages_in_dir                   html  
Rd warning: C:/projects/BUILD/R-source-win32/src/library/tools/man/check_packages_in_dir.Rd:122: file link 'mclapply' in package 'parallel' does not exist and so has been treated as a topic
Rd warning: C:/projects/BUILD/R-source-win32/src/library/tools/man/check_packages_in_dir.Rd:123: file link 'parLapply' in package 'parallel' does not exist and so has been treated as a topic
    checkFF                                 html  
    checkMD5sums                            html  
    checkPoFiles                            html  
    checkRd                                 html  
    checkRdaFiles                           html  
    checkTnF                                html  
    checkVignettes                          html  
    codoc                                   html  
    compactPDF                              html  
    CRANtools                               html  
    delimMatch                              html  
    dependsOnPkgs                           html  
    encoded                                 html  
    fileutils                               html  
    find_gs_cmd                             html  
    getVignetteInfo                         html  
    HTMLheader                              html  
    HTMLlinks                               html  
    loadRdMacros                            html  
    make_translations_pkg                   html  
    makeLazyLoading                         html  
    makevars                                html  
    md5sum                                  html  
    package_dependencies                    html  
    package_native_routine_registration_skeleton
                                            html  
    parse_Rd                                html  
    parseLatex                              html  
    print.via.format                        html  
    pskill                                  html  
    psnice                                  html  
    QC                                      html  
    Rcmd                                    html  
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    Rdutils                                 html  
    read.00Index                            html  
    showNonASCII                            html  
    startDynamicHelp                        html  
    SweaveTeXFilter                         html  
    testInstalledPackage                    html  
    texi2dvi                                html  
    toHTML                                  html  
    tools-defunct                           html  
    tools-deprecated                        html  
    tools-package                           html  
    toRd                                    html  
    toTitleCase                             html  
    undoc                                   html  
    update_pkg_po                           html  
    updatePACKAGES                          html  
    vignetteEngine                          html  
    vignetteInfo                            html  
    writePACKAGES                           html  
    xgettext                                html  
  converting help for package 'utils'
    adist                                   html  
    alarm                                   html  
    apropos                                 html  
    aregexec                                html  
    arrangeWindows                          html  
    askYesNo                                html  
    aspell-utils                            html  
    aspell                                  html  
    available.packages                      html  
    BATCH                                   html  
    bibentry                                html  
    browseEnv                               html  
    browseURL                               html  
    browseVignettes                         html  
    bug.report                              html  
    capture.output                          html  
    changedFiles                            html  
    choose.dir                              html  
    choose.files                            html  
    chooseBioCmirror                        html  
    chooseCRANmirror                        html  
    citation                                html  
    cite                                    html  
    citEntry                                html  
    clipboard                               html  
    close.socket                            html  
    combn                                   html  
    compareVersion                          html  
    COMPILE                                 html  
    contrib.url                             html  
    count.fields                            html  
    create.post                             html  
    data                                    html  
    dataentry                               html  
    debugcall                               html  
    debugger                                html  
    demo                                    html  
    DLL.version                             html  
    download.file                           html  
    download.packages                       html  
    edit.data.frame                         html  
    edit                                    html  
    example                                 html  
    file.edit                               html  
    filetest                                html  
    findLineNum                             html  
    fix                                     html  
    flush.console                           html  
    format                                  html  
    getAnywhere                             html  
    getFromNamespace                        html  
    getParseData                            html  
    getS3method                             html  
    getWindowsHandle                        html  
    getWindowsHandles                       html  
    glob2rx                                 html  
    globalVariables                         html  
    hasName                                 html  
    head                                    html  
    help                                    html  
    help.request                            html  
    help.search                             html  
    help.start                              html  
    hsearch-utils                           html  
    install.packages                        html  
    INSTALL                                 html  
    installed.packages                      html  
    isS3method                              html  
    isS3stdGen                              html  
    LINK                                    html  
    localeToCharset                         html  
    ls_str                                  html  
    maintainer                              html  
    make.packages.html                      html  
    make.socket                             html  
    memory.size                             html  
    menu                                    html  
    methods                                 html  
    mirrorAdmin                             html  
    modifyList                              html  
    news                                    html  
    nsl                                     html  
    object.size                             html  
    package.skeleton                        html  
    packageDescription                      html  
    packageName                             html  
    packageStatus                           html  
    page                                    html  
    person                                  html  
    PkgUtils                                html  
    process.events                          html  
    prompt                                  html  
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    Question                                html  
    rcompgen                                html  
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    recover                                 html  
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    remove.packages                         html  
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    RHOME                                   html  
    roman                                   html  
    Rprof                                   html  
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    RSiteSearch                             html  
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    Rtangle                                 html  
    RweaveLatex                             html  
    savehistory                             html  
    select.list                             html  
    sessionInfo                             html  
    setRepositories                         html  
    setWindowTitle                          html  
    SHLIB                                   html  
    shortPathName                           html  
    sourceutils                             html  
    stack                                   html  
    str                                     html  
    strcapture                              html  
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    toLatex                                 html  
    txtProgressBar                          html  
    type.convert                            html  
    untar                                   html  
    unzip                                   html  
    update.packages                         html  
    url.show                                html  
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    utils-defunct                           html  
    utils-deprecated                        html  
    utils-package                           html  
    View                                    html  
    vignette                                html  
    warnErrList                             html  
    winDialog                               html  
    winextras                               html  
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    write.table                             html  
    zip                                     html  
  converting help for package 'grDevices'
    adjustcolor                             html  
    as.graphicsAnnot                        html  
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    boxplot.stats                           html  
    bringToTop                              html  
    cairo                                   html  
    check.options                           html  
    chull                                   html  
    cm                                      html  
    col2rgb                                 html  
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    contourLines                            html  
    convertColor                            html  
    densCols                                html  
    dev.capabilities                        html  
    dev.capture                             html  
    dev.flush                               html  
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    dev.size                                html  
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    dev2bitmap                              html  
    devAskNewPage                           html  
    Devices                                 html  
    embedFonts                              html  
    extendrange                             html  
    getGraphicsEvent                        html  
    gray.colors                             html  
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    grDevices-package                       html  
    grSoftVersion                           html  
    hcl                                     html  
    Hershey                                 html  
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    make.rgb                                html  
    msgWindow                               html  
    n2mfrow                                 html  
    nclass                                  html  
    palette                                 html  
    palettes                                html  
    pdf.options                             html  
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    pictex                                  html  
    plotmath                                html  
    postscript                              html  
    postscriptFonts                         html  
    pretty.Date                             html  
    ps.options                              html  
    quartz                                  html  
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    rgb                                     html  
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    Type1Font                               html  
    windows.options                         html  
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    x11Fonts                                html  
    xfig                                    html  
    xy.coords                               html  
    xyTable                                 html  
    xyz.coords                              html  
    png                                     html  
    savePlot                                html  
  converting help for package 'graphics'
    abline                                  html  
    arrows                                  html  
    assocplot                               html  
    axis.POSIXct                            html  
    axis                                    html  
    axTicks                                 html  
    barplot                                 html  
    box                                     html  
    boxplot.matrix                          html  
    boxplot                                 html  
    bxp                                     html  
    cdplot                                  html  
    clip                                    html  
    contour                                 html  
    convertXY                               html  
    coplot                                  html  
    curve                                   html  
    dotchart                                html  
    filled.contour                          html  
    fourfoldplot                            html  
    frame                                   html  
    graphics-defunct                        html  
    graphics-package                        html  
    grid                                    html  
    hist.POSIXt                             html  
    hist                                    html  
    identify                                html  
    image                                   html  
    layout                                  html  
    legend                                  html  
    lines                                   html  
    locator                                 html  
    matplot                                 html  
    mosaicplot                              html  
    mtext                                   html  
    pairs                                   html  
    panel.smooth                            html  
    par                                     html  
    persp                                   html  
    pie                                     html  
    plot.dataframe                          html  
    plot.default                            html  
    plot.design                             html  
    plot.factor                             html  
    plot.formula                            html  
    plot.raster                             html  
    plot                                    html  
    plot.table                              html  
    plot.window                             html  
    plot.xy                                 html  
    plothistogram                           html  
    points                                  html  
    polygon                                 html  
    polypath                                html  
    rasterImage                             html  
    rect                                    html  
    rug                                     html  
    screen                                  html  
    segments                                html  
    smoothScatter                           html  
    spineplot                               html  
    stars                                   html  
    stem                                    html  
    stripchart                              html  
    strwidth                                html  
    sunflowerplot                           html  
    symbols                                 html  
    text                                    html  
    title                                   html  
    units                                   html  
    xspline                                 html  
    zAxis                                   html  
  converting help for package 'stats'
    acf                                     html  
    acf2AR                                  html  
    add1                                    html  
    addmargins                              html  
    aggregate                               html  
    AIC                                     html  
    alias                                   html  
    anova.glm                               html  
    anova.lm                                html  
    anova.mlm                               html  
    anova                                   html  
    ansari.test                             html  
    aov                                     html  
    approxfun                               html  
    ar.ols                                  html  
    ar                                      html  
    arima                                   html  
    arima.sim                               html  
    arima0                                  html  
    ARMAacf                                 html  
    ARMAtoMA                                html  
    as.hclust                               html  
    asOneSidedFormula                       html  
    ave                                     html  
    bandwidth                               html  
    bartlett.test                           html  
    Beta                                    html  
    binom.test                              html  
    Binomial                                html  
    biplot.princomp                         html  
    biplot                                  html  
    birthday                                html  
    box.test                                html  
    cancor                                  html  
    case.names                              html  
    Cauchy                                  html  
    checkMFClasses                          html  
    chisq.test                              html  
    Chisquare                               html  
    cmdscale                                html  
    coef                                    html  
    complete.cases                          html  
    confint                                 html  
    constrOptim                             html  
    contrast                                html  
    contrasts                               html  
    convolve                                html  
    cophenetic                              html  
    cor                                     html  
    cor.test                                html  
    cov.wt                                  html  
    cpgram                                  html  
    cutree                                  html  
    decompose                               html  
    delete.response                         html  
    dendrapply                              html  
    dendrogram                              html  
    density                                 html  
    deriv                                   html  
    deviance                                html  
    df.residual                             html  
    diffinv                                 html  
    dist                                    html  
    Distributions                           html  
    dummy.coef                              html  
    ecdf                                    html  
    eff.aovlist                             html  
    effects                                 html  
    embed                                   html  
    expand.model.frame                      html  
    Exponential                             html  
    extractAIC                              html  
    factanal                                html  
    factor.scope                            html  
    family                                  html  
    Fdist                                   html  
    fft                                     html  
    filter                                  html  
    fisher.test                             html  
    fitted.values                           html  
    fivenum                                 html  
    fligner.test                            html  
    formula.nls                             html  
    formula                                 html  
    friedman.test                           html  
    ftable.formula                          html  
    ftable                                  html  
    GammaDist                               html  
    Geometric                               html  
    getInitial                              html  
    glm.control                             html  
    glm                                     html  
    glm.summaries                           html  
    hclust                                  html  
    heatmap                                 html  
    HoltWinters                             html  
    Hypergeometric                          html  
    identify.hclust                         html  
    influence.measures                      html  
    integrate                               html  
    interaction.plot                        html  
    IQR                                     html  
    is.empty                                html  
    isoreg                                  html  
    KalmanLike                              html  
    kernapply                               html  
    kernel                                  html  
    kmeans                                  html  
    kruskal.test                            html  
    ks.test                                 html  
    ksmooth                                 html  
    lag.plot                                html  
    lag                                     html  
    line                                    html  
    listof                                  html  
    lm.influence                            html  
    lm                                      html  
    lm.summaries                            html  
    lmfit                                   html  
    loadings                                html  
    loess.control                           html  
    loess                                   html  
    Logistic                                html  
    logLik                                  html  
    loglin                                  html  
    Lognormal                               html  
    lowess                                  html  
    ls.diag                                 html  
    ls.print                                html  
    lsfit                                   html  
    mad                                     html  
    mahalanobis                             html  
    make.link                               html  
    makepredictcall                         html  
    manova                                  html  
    mantelhaen.test                         html  
    mauchly.test                            html  
    mcnemar.test                            html  
    median                                  html  
    medpolish                               html  
    model.extract                           html  
    model.frame                             html  
    model.matrix                            html  
    model.tables                            html  
    monthplot                               html  
    mood.test                               html  
    Multinom                                html  
    na.action                               html  
    na.contiguous                           html  
    na.fail                                 html  
    nafns                                   html  
    naprint                                 html  
    NegBinomial                             html  
    nextn                                   html  
    nlm                                     html  
    nlminb                                  html  
    nls.control                             html  
    nls                                     html  
    NLSstAsymptotic                         html  
    NLSstClosestX                           html  
    NLSstLfAsymptote                        html  
    NLSstRtAsymptote                        html  
    nobs                                    html  
    Normal                                  html  
    numericDeriv                            html  
    offset                                  html  
    oneway.test                             html  
    optim                                   html  
    optimize                                html  
    order.dendrogram                        html  
    p.adjust                                html  
    pairwise.prop.test                      html  
    pairwise.t.test                         html  
    pairwise.table                          html  
    pairwise.wilcox.test                    html  
    plot.acf                                html  
    plot.density                            html  
    plot.HoltWinters                        html  
    plot.isoreg                             html  
    plot.lm                                 html  
    plot.ppr                                html  
    plot.profile.nls                        html  
    plot.spec                               html  
    plot.stepfun                            html  
    plot.ts                                 html  
    Poisson                                 html  
    poisson.test                            html  
    poly                                    html  
    power.anova.test                        html  
    power.prop.test                         html  
    power                                   html  
    power.t.test                            html  
    pp.test                                 html  
    ppoints                                 html  
    ppr                                     html  
    prcomp                                  html  
    predict.arima                           html  
    predict.glm                             html  
    predict.HoltWinters                     html  
    predict.lm                              html  
    predict.loess                           html  
    predict.nls                             html  
    predict                                 html  
    predict.smooth.spline                   html  
    preplot                                 html  
    princomp                                html  
    print.power.htest                       html  
    print.ts                                html  
    printCoefmat                            html  
    profile.nls                             html  
    profile                                 html  
    proj                                    html  
    prop.test                               html  
    prop.trend.test                         html  
    qqnorm                                  html  
    quade.test                              html  
    quantile                                html  
    r2dtable                                html  
    read.ftable                             html  
    rect.hclust                             html  
    relevel                                 html  
    reorder.dendrogram                      html  
    reorder.factor                          html  
    replications                            html  
    reshape                                 html  
    residuals                               html  
    runmed                                  html  
    rWishart                                html  
    scatter.smooth                          html  
    screeplot                               html  
    sd                                      html  
    se.contrast                             html  
    selfStart                               html  
    setNames                                html  
    shapiro.test                            html  
    sigma                                   html  
    SignRank                                html  
    simulate                                html  
    smooth                                  html  
    smooth.spline                           html  
    smoothEnds                              html  
    sortedXyData                            html  
    spec.ar                                 html  
    spec.pgram                              html  
    spec.taper                              html  
    spectrum                                html  
    splinefun                               html  
    SSasymp                                 html  
    SSasympOff                              html  
    SSasympOrig                             html  
    SSbiexp                                 html  
    SSD                                     html  
    SSfol                                   html  
    SSfpl                                   html  
    SSgompertz                              html  
    SSlogis                                 html  
    SSmicmen                                html  
    SSweibull                               html  
    start                                   html  
    stat.anova                              html  
    stats-defunct                           html  
    stats-deprecated                        html  
    stats-package                           html  
    step                                    html  
    stepfun                                 html  
    stl                                     html  
    stlmethods                              html  
    StructTS                                html  
    summary.aov                             html  
    summary.glm                             html  
    summary.lm                              html  
    summary.manova                          html  
    summary.nls                             html  
    summary.princomp                        html  
    supsmu                                  html  
    symnum                                  html  
    t.test                                  html  
    TDist                                   html  
    termplot                                html  
    terms.formula                           html  
    terms.object                            html  
    terms                                   html  
    time                                    html  
    toeplitz                                html  
    ts-methods                              html  
    ts.plot                                 html  
    ts                                      html  
    ts.union                                html  
    tsdiag                                  html  
    tsp                                     html  
    tsSmooth                                html  
    Tukey                                   html  
    TukeyHSD                                html  
    Uniform                                 html  
    uniroot                                 html  
    update.formula                          html  
    update                                  html  
    var.test                                html  
    varimax                                 html  
    vcov                                    html  
    Weibull                                 html  
    weighted.mean                           html  
    weighted.residuals                      html  
    weights                                 html  
    wilcox.test                             html  
    Wilcoxon                                html  
    window                                  html  
    xtabs                                   html  
    zC                                      html  
  converting help for package 'datasets'
    ability.cov                             html  
    airmiles                                html  
    AirPassengers                           html  
    airquality                              html  
    anscombe                                html  
    attenu                                  html  
    attitude                                html  
    austres                                 html  
    beavers                                 html  
    BJsales                                 html  
    BOD                                     html  
    cars                                    html  
    ChickWeight                             html  
    chickwts                                html  
    co2                                     html  
    crimtab                                 html  
    datasets-package                        html  
    discoveries                             html  
    DNase                                   html  
    esoph                                   html  
    euro                                    html  
    eurodist                                html  
    EuStockMarkets                          html  
    faithful                                html  
    Formaldehyde                            html  
    freeny                                  html  
    HairEyeColor                            html  
    Harman23.cor                            html  
    Harman74.cor                            html  
    Indometh                                html  
    infert                                  html  
    InsectSprays                            html  
    iris                                    html  
    islands                                 html  
    JohnsonJohnson                          html  
    LakeHuron                               html  
    lh                                      html  
    LifeCycleSavings                        html  
    Loblolly                                html  
    longley                                 html  
    lynx                                    html  
    morley                                  html  
    mtcars                                  html  
    nhtemp                                  html  
    Nile                                    html  
    nottem                                  html  
    npk                                     html  
    occupationalStatus                      html  
    Orange                                  html  
    OrchardSprays                           html  
    PlantGrowth                             html  
    precip                                  html  
    presidents                              html  
    pressure                                html  
    Puromycin                               html  
    quakes                                  html  
    randu                                   html  
    rivers                                  html  
    rock                                    html  
    sleep                                   html  
    stackloss                               html  
    state                                   html  
    sunspot.month                           html  
    sunspot.year                            html  
    sunspots                                html  
    swiss                                   html  
    Theoph                                  html  
    Titanic                                 html  
    ToothGrowth                             html  
    treering                                html  
    trees                                   html  
    UCBAdmissions                           html  
    UKDriverDeaths                          html  
    UKgas                                   html  
    UKLungDeaths                            html  
    USAccDeaths                             html  
    USArrests                               html  
    USJudgeRatings                          html  
    USPersonalExpenditure                   html  
    uspop                                   html  
    VADeaths                                html  
    volcano                                 html  
    warpbreaks                              html  
    women                                   html  
    WorldPhones                             html  
    WWWusage                                html  
    zCO2                                    html  
  converting help for package 'methods'
    as                                      html  
    BasicClasses                            html  
    callGeneric                             html  
    canCoerce                               html  
    cbind2                                  html  
    Classes                                 html  
    Classes_Details                         html  
    classesToAM                             html  
    className                               html  
    classRepresentation-class               html  
    Documentation                           html  
    dotsMethods                             html  
    EmptyMethodsList-class                  html  
    EnvironmentClass                        html  
    evalSource                              html  
    findClass                               html  
    findMethods                             html  
    fixPrevious                             html  
    genericFunction-class                   html  
    GenericFunctions                        html  
    getClass                                html  
    getMethod                               html  
    getPackageName                          html  
    hasArg                                  html  
    implicitGeneric                         html  
    inheritedSlotNames                      html  
    initialize-methods                      html  
    Introduction                            html  
    is                                      html  
    isSealedMethod                          html  
    LanguageClasses                         html  
    languageEl                              html  
    LinearMethodsList-class                 html  
    localRefClass                           html  
    method.skeleton                         html  
    MethodDefinition-class                  html  
    methods-defunct                         html  
    methods-deprecated                      html  
    methods-package                         html  
    Methods                                 html  
    Methods_Details                         html  
    Methods_for_Nongenerics                 html  
    Methods_for_S3                          html  
    MethodsList-class                       html  
    MethodsList                             html  
    MethodSupport                           html  
    methodUtilities                         html  
    MethodWithNext-class                    html  
    new                                     html  
    NextMethod                              html  
    nonStructure-class                      html  
    ObjectsWithPackage-class                html  
    promptClass                             html  
    promptMethods                           html  
    RClassUtils                             html  
    refClass                                html  
    removeMethod                            html  
    representation                          html  
    RMethodUtils                            html  
    S3Part                                  html  
    S4groupGeneric                          html  
    SClassExtension-class                   html  
    selectSuperClasses                      html  
    setAs                                   html  
    setClass                                html  
    setClassUnion                           html  
    setGeneric                              html  
    setGroupGeneric                         html  
    setIs                                   html  
    setLoadActions                          html  
    setMethod                               html  
    setOldClass                             html  
    setSClass                               html  
    show                                    html  
    showMethods                             html  
    signature-class                         html  
    slot                                    html  
    stdRefClass                             html  
    StructureClasses                        html  
    substituteDirect                        html  
    testInheritedMethods                    html  
    TraceClasses                            html  
    validObject                             html  
    zBasicFunsList                          html  
  converting help for package 'grid'
    absolute.size                           html  
    arrow                                   html  
    calcStringMetric                        html  
    current.viewport                        html  
    dataViewport                            html  
    depth                                   html  
    deviceLoc                               html  
    drawDetails                             html  
    editDetails                             html  
    explode                                 html  
    gEdit                                   html  
    getNames                                html  
    gpar                                    html  
    gPath                                   html  
    grid-defunct                            html  
    grid-internal                           html  
    grid-package                            html  
    grid.add                                html  
    grid.bezier                             html  
    grid.cap                                html  
    grid.circle                             html  
    grid.clip                               html  
    grid.convert                            html  
    grid.copy                               html  
    grid.curve                              html  
    grid.delay                              html  
    grid.display.list                       html  
    grid.DLapply                            html  
    grid.draw                               html  
    grid.edit                               html  
    grid.force                              html  
    grid.frame                              html  
    grid.function                           html  
    grid.get                                html  
    grid.grab                               html  
    grid.grep                               html  
    grid.grill                              html  
    grid.grob                               html  
    grid.layout                             html  
    grid.lines                              html  
    grid.locator                            html  
    grid.ls                                 html  
    grid.move.to                            html  
    grid.newpage                            html  
    grid.null                               html  
    grid.pack                               html  
    grid.path                               html  
    grid.place                              html  
    grid.plot.and.legend                    html  
    grid.points                             html  
    grid.polygon                            html  
    grid.pretty                             html  
    grid.raster                             html  
    Grid                                    html  
    grid.record                             html  
    grid.rect                               html  
    grid.refresh                            html  
    grid.remove                             html  
    grid.reorder                            html  
    grid.roundrect                          html  
    grid.segments                           html  
    grid.set                                html  
    grid.show.layout                        html  
    grid.show.viewport                      html  
    grid.text                               html  
    grid.xaxis                              html  
    grid.xspline                            html  
    grid.yaxis                              html  
    grobCoords                              html  
    grobName                                html  
    grobWidth                               html  
    grobX                                   html  
    legendGrob                              html  
    makeContent                             html  
    plotViewport                            html  
    resolveRasterSize                       html  
    showGrob                                html  
    showViewport                            html  
    stringWidth                             html  
    unit.c                                  html  
    unit.length                             html  
    unit.pmin                               html  
    unit                                    html  
    unit.rep                                html  
    valid.just                              html  
    validDetails                            html  
    viewport                                html  
    viewports                               html  
    vpPath                                  html  
    widthDetails                            html  
    xDetails                                html  
    xsplinePoints                           html  
  converting help for package 'splines'
    asVector                                html  
    backSpline                              html  
    bs                                      html  
    interpSpline                            html  
    ns                                      html  
    periodicSpline                          html  
    polySpline                              html  
    predict.bs                              html  
    predict.bSpline                         html  
    splineDesign                            html  
    splineKnots                             html  
    splineOrder                             html  
    splines-package                         html  
    xyVector                                html  
  converting help for package 'stats4'
    coef-methods                            html  
    confint-methods                         html  
    logLik-methods                          html  
    mle-class                               html  
    mle                                     html  
    plot-methods                            html  
    profile-methods                         html  
    profile.mle-class                       html  
    show-methods                            html  
    stats4-package                          html  
    summary-methods                         html  
    summary.mle-class                       html  
    update-methods                          html  
    vcov-methods                            html  
  converting help for package 'tcltk'
    TclInterface                            html  
    tclServiceMode                          html  
    tcltk-defunct                           html  
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    tk_choose.dir                           html  
    tk_choose.files                         html  
    tk_messageBox                           html  
    tk_select.list                          html  
    TkCommands                              html  
    tkpager                                 html  
    tkProgressBar                           html  
    tkStartGUI                              html  
    TkWidgetcmds                            html  
    TkWidgets                               html  
  converting help for package 'compiler'
    compile                                 html  
  converting help for package 'parallel'
    clusterApply                            html  
    detectCores                             html  
    makeCluster                             html  
    parallel-package                        html  
    RngStream                               html  
    splitIndices                            html  
    mcdummies                               html  
creating doc/NEWS
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------ Making HTML documentation ------
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creating doc/manual/R-intro.html
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creating doc/manual/R-ints.html
Unescaped left brace in regex is deprecated here (and will be fatal in Perl 5.32), passed through in regex; marked by <-- HERE in m/^\s+@([[:alnum:]][[:alnum:]\-]*)({ <-- HERE })?\s*/ at C:/Rtools/texinfo5/Texinfo/Parser.pm line 5441.
Unescaped left brace in regex is deprecated here (and will be fatal in Perl 5.32), passed through in regex; marked by <-- HERE in m/^\s+@([[:alnum:]][[:alnum:]\-]*)({ <-- HERE })?\s*(\@(c|comment)((\@|\s+).*)?)?/ at C:/Rtools/texinfo5/Texinfo/Parser.pm line 5446.
creating doc/manual/R-lang.html
Unescaped left brace in regex is deprecated here (and will be fatal in Perl 5.32), passed through in regex; marked by <-- HERE in m/^\s+@([[:alnum:]][[:alnum:]\-]*)({ <-- HERE })?\s*/ at C:/Rtools/texinfo5/Texinfo/Parser.pm line 5441.
Unescaped left brace in regex is deprecated here (and will be fatal in Perl 5.32), passed through in regex; marked by <-- HERE in m/^\s+@([[:alnum:]][[:alnum:]\-]*)({ <-- HERE })?\s*(\@(c|comment)((\@|\s+).*)?)?/ at C:/Rtools/texinfo5/Texinfo/Parser.pm line 5446.
making rw-FAQ
Unescaped left brace in regex is deprecated here (and will be fatal in Perl 5.32), passed through in regex; marked by <-- HERE in m/^\s+@([[:alnum:]][[:alnum:]\-]*)({ <-- HERE })?\s*/ at C:/Rtools/texinfo5/Texinfo/Parser.pm line 5441.
Unescaped left brace in regex is deprecated here (and will be fatal in Perl 5.32), passed through in regex; marked by <-- HERE in m/^\s+@([[:alnum:]][[:alnum:]\-]*)({ <-- HERE })?\s*(\@(c|comment)((\@|\s+).*)?)?/ at C:/Rtools/texinfo5/Texinfo/Parser.pm line 5446.
Negative repeat count does nothing at C:/Rtools/texinfo5/Texinfo/Convert/Plaintext.pm line 1065.
Negative repeat count does nothing at C:/Rtools/texinfo5/Texinfo/Convert/Plaintext.pm line 1065.
Negative repeat count does nothing at C:/Rtools/texinfo5/Texinfo/Convert/Plaintext.pm line 1065.
Negative repeat count does nothing at C:/Rtools/texinfo5/Texinfo/Convert/Plaintext.pm line 1065.
Negative repeat count does nothing at C:/Rtools/texinfo5/Texinfo/Convert/Plaintext.pm line 1065.
Negative repeat count does nothing at C:/Rtools/texinfo5/Texinfo/Convert/Plaintext.pm line 1065.
Negative repeat count does nothing at C:/Rtools/texinfo5/Texinfo/Convert/Plaintext.pm line 1065.
Negative repeat count does nothing at C:/Rtools/texinfo5/Texinfo/Convert/Plaintext.pm line 1065.
making rw-FAQ.html
Unescaped left brace in regex is deprecated here (and will be fatal in Perl 5.32), passed through in regex; marked by <-- HERE in m/^\s+@([[:alnum:]][[:alnum:]\-]*)({ <-- HERE })?\s*/ at C:/Rtools/texinfo5/Texinfo/Parser.pm line 5441.
Unescaped left brace in regex is deprecated here (and will be fatal in Perl 5.32), passed through in regex; marked by <-- HERE in m/^\s+@([[:alnum:]][[:alnum:]\-]*)({ <-- HERE })?\s*(\@(c|comment)((\@|\s+).*)?)?/ at C:/Rtools/texinfo5/Texinfo/Parser.pm line 5446.
make[2]: Nothing to be done for 'all'.
making cairoBM.d from cairoBM.c
C:/Rtools/mingw_32/bin/gcc  -I"../../../../../include" -DNDEBUG -I../../../../../src/include -I. -I.. -DHAVE_CONFIG_H -DR_ARCH='"i386"' -I"C:/projects/BUILD/R-source-win32/cairo/win32"    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c cairoBM.c -o cairoBM.o
C:/Rtools/mingw_32/bin/gcc  -shared -s -static-libgcc -o winCairo.dll winCairo.def cairoBM.o -L"C:/projects/BUILD/R-source-win32/cairo/win32" -lcairo -lfreetype -lpng -lpixman-1 -lharfbuzz -lbz2 -lz -lgdi32 -lmsimg32 -L.. -lgrDevices -L"C:/projects/BUILD/R-source-win32/extsoft/lib/i386" -L"C:/projects/BUILD/R-source-win32/extsoft/lib"  -L"../../../../../bin/i386" -lR 
--- Making recommended packages

----- installing recommended package MASS
* installing *source* package 'MASS' ...
** package 'MASS' successfully unpacked and MD5 sums checked
** using non-staged installation
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c MASS.c -o MASS.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c lqs.c -o lqs.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o MASS.dll tmp.def MASS.o lqs.o -LC:/projects/BUILD/R-source-win32/extsoft/lib/i386 -LC:/projects/BUILD/R-source-win32/extsoft/lib -LC:/projects/BUILD/R-source-win32/bin/i386 -lR
installing to C:/projects/BUILD/R-source-win32/library/MASS/libs/i386
** R
** data
*** moving datasets to lazyload DB
** inst
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'MASS'
    finding HTML links ... done
    Aids2                                   html  
    Animals                                 html  
    Boston                                  html  
    Cars93                                  html  
    Cushings                                html  
    DDT                                     html  
    GAGurine                                html  
    Insurance                               html  
    MASS-internal                           html  
    Melanoma                                html  
    Null                                    html  
    OME                                     html  
    Pima.tr                                 html  
    Rabbit                                  html  
    Rubber                                  html  
    SP500                                   html  
    Sitka                                   html  
    Sitka89                                 html  
    Skye                                    html  
    Traffic                                 html  
    UScereal                                html  
    UScrime                                 html  
    VA                                      html  
    abbey                                   html  
    accdeaths                               html  
    addterm                                 html  
    anorexia                                html  
    anova.negbin                            html  
    area                                    html  
    bacteria                                html  
    bandwidth.nrd                           html  
    bcv                                     html  
    beav1                                   html  
    beav2                                   html  
    biopsy                                  html  
    birthwt                                 html  
    boxcox                                  html  
    cabbages                                html  
    caith                                   html  
    cats                                    html  
    cement                                  html  
    chem                                    html  
    con2tr                                  html  
    confint                                 html  
    contr.sdif                              html  
    coop                                    html  
    corresp                                 html  
    cov.rob                                 html  
    cov.trob                                html  
    cpus                                    html  
    crabs                                   html  
    deaths                                  html  
    denumerate                              html  
    dose.p                                  html  
    drivers                                 html  
    dropterm                                html  
    eagles                                  html  
    epil                                    html  
    eqscplot                                html  
    farms                                   html  
    fgl                                     html  
    fitdistr                                html  
    forbes                                  html  
    fractions                               html  
    galaxies                                html  
    gamma.dispersion                        html  
    gamma.shape.glm                         html  
    gehan                                   html  
    genotype                                html  
    geyser                                  html  
    gilgais                                 html  
    ginv                                    html  
    glm.convert                             html  
    glm.nb                                  html  
    glmmPQL                                 html  
    hills                                   html  
    hist.scott                              html  
    housing                                 html  
    huber                                   html  
    hubers                                  html  
    immer                                   html  
    isoMDS                                  html  
    kde2d                                   html  
    lda                                     html  
    ldahist                                 html  
    leuk                                    html  
    lm.gls                                  html  
    lm.ridge                                html  
    loglm                                   html  
    loglm1                                  html  
    logtrans                                html  
    lqs                                     html  
    mammals                                 html  
    mca                                     html  
    mcycle                                  html  
    menarche                                html  
    michelson                               html  
    minn38                                  html  
    motors                                  html  
    muscle                                  html  
    mvrnorm                                 html  
    negative.binomial                       html  
    newcomb                                 html  
    nlschools                               html  
    npk                                     html  
    npr1                                    html  
    oats                                    html  
    painters                                html  
    pairs.lda                               html  
    parcoord                                html  
    petrol                                  html  
    phones                                  html  
    plot.lda                                html  
    plot.mca                                html  
    plot.profile                            html  
    polr                                    html  
    predict.glmmPQL                         html  
    predict.lda                             html  
    predict.lqs                             html  
    predict.mca                             html  
    predict.qda                             html  
    profile.glm                             html  
    qda                                     html  
    quine                                   html  
    rational                                html  
    renumerate                              html  
    rlm                                     html  
    rms.curv                                html  
    rnegbin                                 html  
    road                                    html  
    rotifer                                 html  
    sammon                                  html  
    ships                                   html  
    shoes                                   html  
    shrimp                                  html  
    shuttle                                 html  
    snails                                  html  
    stdres                                  html  
    steam                                   html  
    stepAIC                                 html  
    stormer                                 html  
    studres                                 html  
    summary.loglm                           html  
    summary.negbin                          html  
    summary.rlm                             html  
    survey                                  html  
    synth.tr                                html  
    theta.md                                html  
    topo                                    html  
    truehist                                html  
    ucv                                     html  
    waders                                  html  
    whiteside                               html  
    width.SJ                                html  
    write.matrix                            html  
    wtloss                                  html  
** building package indices
** testing if installed package can be loaded
* DONE (MASS)
Making 'packages.html' ... done

----- installing recommended package lattice
* installing *source* package 'lattice' ...
** package 'lattice' successfully unpacked and MD5 sums checked
** using non-staged installation
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c init.c -o init.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c threeDplot.c -o threeDplot.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o lattice.dll tmp.def init.o threeDplot.o -LC:/projects/BUILD/R-source-win32/extsoft/lib/i386 -LC:/projects/BUILD/R-source-win32/extsoft/lib -LC:/projects/BUILD/R-source-win32/bin/i386 -lR
installing to C:/projects/BUILD/R-source-win32/library/lattice/libs/i386
** R
** data
*** moving datasets to lazyload DB
** demo
** inst
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'lattice'
    finding HTML links ... done
    Lattice                                 html  
    Rows                                    html  
    USMortality                             html  
    axis.default                            html  
    banking                                 html  
    barchart.table                          html  
    barley                                  html  
    cloud                                   html  
    draw.colorkey                           html  
    draw.key                                html  
    environmental                           html  
    ethanol                                 html  
    histogram                               html  
    interaction                             html  
    lattice.options                         html  
    latticeParseFormula                     html  
    level.colors                            html  
    levelplot                               html  
    llines                                  html  
    lset                                    html  
    make.groups                             html  
    melanoma                                html  
    oneway                                  html  
    packet.panel.default                    html  
    panel.axis                              html  
    panel.barchart                          html  
    panel.bwplot                            html  
    panel.cloud                             html  
    panel.densityplot                       html  
    panel.dotplot                           html  
    panel.functions                         html  
    panel.histogram                         html  
    panel.levelplot                         html  
    panel.loess                             html  
    panel.number                            html  
    panel.pairs                             html  
    panel.parallel                          html  
    panel.qqmath                            html  
    panel.qqmathline                        html  
    panel.smoothScatter                     html  
    panel.spline                            html  
    panel.stripplot                         html  
    panel.superpose                         html  
    panel.violin                            html  
    panel.xyplot                            html  
    prepanel.default                        html  
    prepanel.functions                      html  
    print.trellis                           html  
    qq                                      html  
    qqmath                                  html  
    rfs                                     html  
    shingles                                html  
    simpleKey                               html  
    simpleTheme                             html  
    singer                                  html  
    splom                                   html  
    strip.default                           html  
    tmd                                     html  
    trellis.device                          html  
    trellis.object                          html  
    trellis.par.get                         html  
    update.trellis                          html  
    utilities.3d                            html  
    xyplot                                  html  
    xyplot.ts                               html  
** building package indices
** testing if installed package can be loaded
* DONE (lattice)
Making 'packages.html' ... done

----- installing recommended package Matrix
* installing *source* package 'Matrix' ...
** package 'Matrix' successfully unpacked and MD5 sums checked
** using non-staged installation
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c CHMfactor.c -o CHMfactor.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c Csparse.c -o Csparse.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c TMatrix_as.c -o TMatrix_as.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c Tsparse.c -o Tsparse.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c init.c -o init.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c Mutils.c -o Mutils.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c chm_common.c -o chm_common.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c cs.c -o cs.o
cs.c: In function 'cs_qr':
cs.c:1408:18: warning: variable 'm' set but not used [-Wunused-but-set-variable]
     csi i, k, p, m, n, vnz, p1, top, m2, len, col, rnz, *s, *leftmost, *Ap, *Ai,
                  ^
cs.c: In function 'cs_counts':
cs.c:543:20: warning: 'jleaf' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 if (jleaf >= 1) delta [j]++ ;   /* A(i,j) is in skeleton */
                    ^
cs.c: In function 'cs_schol.part.20':
cs.c:543:20: warning: 'jleaf' may be used uninitialized in this function [-Wmaybe-uninitialized]
cs.c:512:36: note: 'jleaf' was declared here
     csi i, j, k, n, m, J, s, p, q, jleaf, *ATp, *ATi, *maxfirst, *prevleaf,
                                    ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c cs_utils.c -o cs_utils.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c dense.c -o dense.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c dgCMatrix.c -o dgCMatrix.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c dgTMatrix.c -o dgTMatrix.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c dgeMatrix.c -o dgeMatrix.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c dpoMatrix.c -o dpoMatrix.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c dppMatrix.c -o dppMatrix.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c dsCMatrix.c -o dsCMatrix.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c dsyMatrix.c -o dsyMatrix.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c dspMatrix.c -o dspMatrix.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c dtCMatrix.c -o dtCMatrix.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c dtTMatrix.c -o dtTMatrix.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c dtrMatrix.c -o dtrMatrix.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c dtpMatrix.c -o dtpMatrix.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c factorizations.c -o factorizations.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ldense.c -o ldense.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c lgCMatrix.c -o lgCMatrix.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c sparseQR.c -o sparseQR.o
sparseQR.c: In function 'sparseQR_resid_fitted':
sparseQR.c:125:9: warning: 'd_a' may be used uninitialized in this function [-Wmaybe-uninitialized]
  d_a[0] = m;/* -> @Dim is ok;  @Dimnames (i.e. colnames) still are */ \
         ^
sparseQR.c:99:41: note: 'd_a' was declared here
  m = ydims[0], n = ydims[1], M = V->m, *d_a;   \
                                         ^
sparseQR.c:202:5: note: in expansion of macro 'INIT_sparseQR_'
     INIT_sparseQR_(FALSE);
     ^
In file included from Mutils.h:14:0,
                 from sparseQR.h:4,
                 from sparseQR.c:1:
C:/projects/BUILD/R-source-win32/include/Rdefines.h:161:35: warning: 'aa' may be used uninitialized in this function [-Wmaybe-uninitialized]
 #define SET_SLOT(x, what, value)  R_do_slot_assign(x, what, value)
                                   ^
sparseQR.c:94:15: note: 'aa' was declared here
     SEXP ans, aa, dmns = R_NilValue;     \
               ^
sparseQR.c:202:5: note: in expansion of macro 'INIT_sparseQR_'
     INIT_sparseQR_(FALSE);
     ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c abIndex.c -o abIndex.o
( cd Lib ; /rtools/bin/make clean )
( cd Source ; /rtools/bin/make clean )
( cd Source ; /rtools/bin/make clean )
( cd Lib ; /rtools/bin/make -f "C:/projects/BUILD/R-source-win32/etc/i386/Makeconf" -f Makefile )
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Core/cholmod_aat.c -o cholmod_aat.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Core/cholmod_add.c -o cholmod_add.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Core/cholmod_band.c -o cholmod_band.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Core/cholmod_change_factor.c -o cholmod_change_factor.o
In file included from ../Core/cholmod_change_factor.c:116:0:
../Core/t_cholmod_change_factor.c: In function 'r_change_simplicial_numeric':
../Core/t_cholmod_change_factor.c:40:18: warning: variable 'Lz' set but not used [-Wunused-but-set-variable]
     double *Lx, *Lz ;
                  ^
In file included from ../Core/cholmod_change_factor.c:118:0:
../Core/t_cholmod_change_factor.c: In function 'c_change_simplicial_numeric':
../Core/t_cholmod_change_factor.c:40:18: warning: variable 'Lz' set but not used [-Wunused-but-set-variable]
     double *Lx, *Lz ;
                  ^
../Core/cholmod_change_factor.c: In function 'simplicial_symbolic_to_super_symbolic':
../Core/cholmod_change_factor.c:265:17: warning: variable 'xsize' set but not used [-Wunused-but-set-variable]
     Int nsuper, xsize, ssize ;
                 ^
../Core/cholmod_change_factor.c: In function 'change_simplicial_numeric':
../Core/cholmod_change_factor.c:680:15: warning: variable 'Li' set but not used [-Wunused-but-set-variable]
     Int *Lp, *Li, *Lnz ;
               ^
../Core/cholmod_change_factor.c:680:10: warning: variable 'Lp' set but not used [-Wunused-but-set-variable]
     Int *Lp, *Li, *Lnz ;
          ^
../Core/cholmod_change_factor.c:679:18: warning: variable 'Lz' set but not used [-Wunused-but-set-variable]
     double *Lx, *Lz ;
                  ^
../Core/cholmod_change_factor.c:679:13: warning: variable 'Lx' set but not used [-Wunused-but-set-variable]
     double *Lx, *Lz ;
             ^
../Core/cholmod_change_factor.c: In function 'll_super_to_simplicial_numeric':
../Core/cholmod_change_factor.c:827:9: warning: variable 'n' set but not used [-Wunused-but-set-variable]
     Int n, lnz, s, nsuper, psi, psend, nsrow, nscol, k1, k2, erows ;
         ^
../Core/cholmod_change_factor.c:826:21: warning: variable 'Lpx' set but not used [-Wunused-but-set-variable]
     Int *Ls, *Lpi, *Lpx, *Super, *Li ;
                     ^
../Core/cholmod_change_factor.c:826:10: warning: variable 'Ls' set but not used [-Wunused-but-set-variable]
     Int *Ls, *Lpi, *Lpx, *Super, *Li ;
          ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Core/cholmod_common.c -o cholmod_common.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Core/cholmod_complex.c -o cholmod_complex.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Core/cholmod_copy.c -o cholmod_copy.o
../Core/cholmod_copy.c: In function 'cholmod_copy':
../Core/cholmod_copy.c:278:25: warning: variable 'lo' set but not used [-Wunused-but-set-variable]
     Int nrow, ncol, up, lo, values, diag, astype ;
                         ^
../Core/cholmod_copy.c:278:21: warning: variable 'up' set but not used [-Wunused-but-set-variable]
     Int nrow, ncol, up, lo, values, diag, astype ;
                     ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Core/cholmod_dense.c -o cholmod_dense.o
In file included from ../Core/cholmod_dense.c:48:0:
../Core/t_cholmod_dense.c: In function 'p_cholmod_sparse_to_dense':
../Core/t_cholmod_dense.c:30:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Xx, *Az, *Xz ;
                            ^
../Core/t_cholmod_dense.c:30:23: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Xx, *Az, *Xz ;
                       ^
../Core/t_cholmod_dense.c:30:13: warning: variable 'Ax' set but not used [-Wunused-but-set-variable]
     double *Ax, *Xx, *Az, *Xz ;
             ^
In file included from ../Core/cholmod_dense.c:50:0:
../Core/t_cholmod_dense.c: In function 'r_cholmod_sparse_to_dense':
../Core/t_cholmod_dense.c:30:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Xx, *Az, *Xz ;
                            ^
../Core/t_cholmod_dense.c:30:23: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Xx, *Az, *Xz ;
                       ^
../Core/t_cholmod_dense.c: In function 'r_cholmod_dense_to_sparse':
../Core/t_cholmod_dense.c:136:28: warning: variable 'Cz' set but not used [-Wunused-but-set-variable]
     double *Xx, *Cx, *Xz, *Cz ;
                            ^
../Core/t_cholmod_dense.c:136:23: warning: variable 'Xz' set but not used [-Wunused-but-set-variable]
     double *Xx, *Cx, *Xz, *Cz ;
                       ^
../Core/t_cholmod_dense.c: In function 'r_cholmod_copy_dense2':
../Core/t_cholmod_dense.c:229:28: warning: variable 'Yz' set but not used [-Wunused-but-set-variable]
     double *Xx, *Xz, *Yx, *Yz ;
                            ^
../Core/t_cholmod_dense.c:229:18: warning: variable 'Xz' set but not used [-Wunused-but-set-variable]
     double *Xx, *Xz, *Yx, *Yz ;
                  ^
In file included from ../Core/cholmod_dense.c:52:0:
../Core/t_cholmod_dense.c: In function 'c_cholmod_sparse_to_dense':
../Core/t_cholmod_dense.c:30:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Xx, *Az, *Xz ;
                            ^
../Core/t_cholmod_dense.c:30:23: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Xx, *Az, *Xz ;
                       ^
../Core/t_cholmod_dense.c: In function 'c_cholmod_dense_to_sparse':
../Core/t_cholmod_dense.c:136:28: warning: variable 'Cz' set but not used [-Wunused-but-set-variable]
     double *Xx, *Cx, *Xz, *Cz ;
                            ^
../Core/t_cholmod_dense.c:136:23: warning: variable 'Xz' set but not used [-Wunused-but-set-variable]
     double *Xx, *Cx, *Xz, *Cz ;
                       ^
../Core/t_cholmod_dense.c: In function 'c_cholmod_copy_dense2':
../Core/t_cholmod_dense.c:229:28: warning: variable 'Yz' set but not used [-Wunused-but-set-variable]
     double *Xx, *Xz, *Yx, *Yz ;
                            ^
../Core/t_cholmod_dense.c:229:18: warning: variable 'Xz' set but not used [-Wunused-but-set-variable]
     double *Xx, *Xz, *Yx, *Yz ;
                  ^
../Core/cholmod_dense.c: In function 'cholmod_eye':
../Core/cholmod_dense.c:303:15: warning: variable 'nz' set but not used [-Wunused-but-set-variable]
     Int i, n, nz ;
               ^
../Core/cholmod_dense.c:302:18: warning: variable 'Xz' set but not used [-Wunused-but-set-variable]
     double *Xx, *Xz ;
                  ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Core/cholmod_error.c -o cholmod_error.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Core/cholmod_factor.c -o cholmod_factor.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Core/cholmod_memory.c -o cholmod_memory.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Core/cholmod_sparse.c -o cholmod_sparse.o
../Core/cholmod_sparse.c: In function 'cholmod_copy_sparse':
../Core/cholmod_sparse.c:488:35: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable]
     Int p, pend, j, ncol, packed, nzmax, nz, xtype ;
                                   ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Core/cholmod_transpose.c -o cholmod_transpose.o
In file included from ../Core/cholmod_transpose.c:124:0:
../Core/t_cholmod_transpose.c: In function 'p_cholmod_transpose_unsym':
../Core/t_cholmod_transpose.c:47:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                                                                     ^
../Core/t_cholmod_transpose.c:47:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                                                        ^
../Core/t_cholmod_transpose.c:47:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                     ^
../Core/t_cholmod_transpose.c:46:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ;
                               ^
../Core/t_cholmod_transpose.c:46:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ;
                          ^
../Core/t_cholmod_transpose.c:45:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                            ^
../Core/t_cholmod_transpose.c:45:23: warning: variable 'Fx' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                       ^
../Core/t_cholmod_transpose.c:45:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                  ^
../Core/t_cholmod_transpose.c:45:13: warning: variable 'Ax' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
             ^
../Core/t_cholmod_transpose.c: In function 'p_cholmod_transpose_sym':
../Core/t_cholmod_transpose.c:143:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ;
                          ^
../Core/t_cholmod_transpose.c:142:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                            ^
../Core/t_cholmod_transpose.c:142:23: warning: variable 'Fx' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                       ^
../Core/t_cholmod_transpose.c:142:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                  ^
../Core/t_cholmod_transpose.c:142:13: warning: variable 'Ax' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
             ^
In file included from ../Core/cholmod_transpose.c:126:0:
../Core/t_cholmod_transpose.c: In function 'r_cholmod_transpose_unsym':
../Core/t_cholmod_transpose.c:47:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                                                                     ^
../Core/t_cholmod_transpose.c:47:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                                                        ^
../Core/t_cholmod_transpose.c:47:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                     ^
../Core/t_cholmod_transpose.c:46:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ;
                               ^
../Core/t_cholmod_transpose.c:46:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ;
                          ^
../Core/t_cholmod_transpose.c:45:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                            ^
../Core/t_cholmod_transpose.c:45:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                  ^
../Core/t_cholmod_transpose.c: In function 'r_cholmod_transpose_sym':
../Core/t_cholmod_transpose.c:143:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ;
                          ^
../Core/t_cholmod_transpose.c:142:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                            ^
../Core/t_cholmod_transpose.c:142:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                  ^
In file included from ../Core/cholmod_transpose.c:128:0:
../Core/t_cholmod_transpose.c: In function 'c_cholmod_transpose_unsym':
../Core/t_cholmod_transpose.c:47:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                                                                     ^
../Core/t_cholmod_transpose.c:47:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                                                        ^
../Core/t_cholmod_transpose.c:47:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                     ^
../Core/t_cholmod_transpose.c:46:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ;
                               ^
../Core/t_cholmod_transpose.c:46:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ;
                          ^
../Core/t_cholmod_transpose.c:45:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                            ^
../Core/t_cholmod_transpose.c:45:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                  ^
../Core/t_cholmod_transpose.c: In function 'c_cholmod_transpose_sym':
../Core/t_cholmod_transpose.c:143:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ;
                          ^
../Core/t_cholmod_transpose.c:142:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                            ^
../Core/t_cholmod_transpose.c:142:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                  ^
In file included from ../Core/cholmod_transpose.c:131:0:
../Core/t_cholmod_transpose.c: In function 'ct_cholmod_transpose_unsym':
../Core/t_cholmod_transpose.c:47:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                                                                     ^
../Core/t_cholmod_transpose.c:47:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                                                        ^
../Core/t_cholmod_transpose.c:47:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                     ^
../Core/t_cholmod_transpose.c:46:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ;
                               ^
../Core/t_cholmod_transpose.c:46:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ;
                          ^
../Core/t_cholmod_transpose.c:45:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                            ^
../Core/t_cholmod_transpose.c:45:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                  ^
../Core/t_cholmod_transpose.c: In function 'ct_cholmod_transpose_sym':
../Core/t_cholmod_transpose.c:143:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ;
                          ^
../Core/t_cholmod_transpose.c:142:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                            ^
../Core/t_cholmod_transpose.c:142:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                  ^
In file included from ../Core/cholmod_transpose.c:133:0:
../Core/t_cholmod_transpose.c: In function 'z_cholmod_transpose_unsym':
../Core/t_cholmod_transpose.c:47:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                                                                     ^
../Core/t_cholmod_transpose.c:47:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                                                        ^
../Core/t_cholmod_transpose.c:47:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                     ^
../Core/t_cholmod_transpose.c:46:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ;
                               ^
../Core/t_cholmod_transpose.c:46:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ;
                          ^
../Core/t_cholmod_transpose.c: In function 'z_cholmod_transpose_sym':
../Core/t_cholmod_transpose.c:143:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ;
                          ^
In file included from ../Core/cholmod_transpose.c:136:0:
../Core/t_cholmod_transpose.c: In function 'zt_cholmod_transpose_unsym':
../Core/t_cholmod_transpose.c:47:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                                                                     ^
../Core/t_cholmod_transpose.c:47:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                                                        ^
../Core/t_cholmod_transpose.c:47:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                     ^
../Core/t_cholmod_transpose.c:46:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ;
                               ^
../Core/t_cholmod_transpose.c:46:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ;
                          ^
../Core/t_cholmod_transpose.c: In function 'zt_cholmod_transpose_sym':
../Core/t_cholmod_transpose.c:143:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ;
                          ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Core/cholmod_triplet.c -o cholmod_triplet.o
In file included from ../Core/cholmod_triplet.c:108:0:
../Core/t_cholmod_triplet.c: In function 'p_cholmod_triplet_to_sparse':
../Core/t_cholmod_triplet.c:31:28: warning: variable 'Tz' set but not used [-Wunused-but-set-variable]
     double *Rx, *Rz, *Tx, *Tz ;
                            ^
../Core/t_cholmod_triplet.c:31:23: warning: variable 'Tx' set but not used [-Wunused-but-set-variable]
     double *Rx, *Rz, *Tx, *Tz ;
                       ^
../Core/t_cholmod_triplet.c:31:18: warning: variable 'Rz' set but not used [-Wunused-but-set-variable]
     double *Rx, *Rz, *Tx, *Tz ;
                  ^
../Core/t_cholmod_triplet.c:31:13: warning: variable 'Rx' set but not used [-Wunused-but-set-variable]
     double *Rx, *Rz, *Tx, *Tz ;
             ^
In file included from ../Core/cholmod_triplet.c:110:0:
../Core/t_cholmod_triplet.c: In function 'r_cholmod_triplet_to_sparse':
../Core/t_cholmod_triplet.c:31:28: warning: variable 'Tz' set but not used [-Wunused-but-set-variable]
     double *Rx, *Rz, *Tx, *Tz ;
                            ^
../Core/t_cholmod_triplet.c:31:18: warning: variable 'Rz' set but not used [-Wunused-but-set-variable]
     double *Rx, *Rz, *Tx, *Tz ;
                  ^
In file included from ../Core/cholmod_triplet.c:112:0:
../Core/t_cholmod_triplet.c: In function 'c_cholmod_triplet_to_sparse':
../Core/t_cholmod_triplet.c:31:28: warning: variable 'Tz' set but not used [-Wunused-but-set-variable]
     double *Rx, *Rz, *Tx, *Tz ;
                            ^
../Core/t_cholmod_triplet.c:31:18: warning: variable 'Rz' set but not used [-Wunused-but-set-variable]
     double *Rx, *Rz, *Tx, *Tz ;
                  ^
../Core/cholmod_triplet.c: In function 'cholmod_triplet_to_sparse':
../Core/cholmod_triplet.c:345:44: warning: variable 'ok' set but not used [-Wunused-but-set-variable]
     Int i, j, p, k, stype, nrow, ncol, nz, ok ;
                                            ^
../Core/cholmod_triplet.c:344:20: warning: variable 'Ri' set but not used [-Wunused-but-set-variable]
     Int *Wj, *Rp, *Ri, *Rnz, *Ti, *Tj ;
                    ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Core/cholmod_version.c -o cholmod_version.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Check/cholmod_check.c -o cholmod_check.o
../Check/cholmod_check.c: In function 'check_common':
../Check/cholmod_check.c:207:61: warning: variable 'init_print' set but not used [-Wunused-but-set-variable]
     Int i, nrow, nmethods, ordering, xworksize, amd_backup, init_print ;
                                                             ^
../Check/cholmod_check.c: In function 'check_dense':
../Check/cholmod_check.c:961:37: warning: variable 'nz' set but not used [-Wunused-but-set-variable]
     Int i, j, d, nrow, ncol, nzmax, nz, init_print, count, xtype ;
                                     ^
../Check/cholmod_check.c: In function 'check_factor':
../Check/cholmod_check.c:1508:2: warning: variable 'ps2' set but not used [-Wunused-but-set-variable]
  ps2, psxend, ssize, xsize, maxcsize, maxesize, nsrow2, jj, ii, xtype ;
  ^
../Check/cholmod_check.c:1506:9: warning: variable 'precise' set but not used [-Wunused-but-set-variable]
  count, precise, init_print, ilast, lnz, head, tail, jprev, plast,
         ^
../Check/cholmod_check.c:1505:38: warning: variable 'ordering' set but not used [-Wunused-but-set-variable]
     Int n, nzmax, j, p, pend, i, nz, ordering, space, is_monotonic, minor,
                                      ^
../Check/cholmod_check.c: In function 'cholmod_check_factor':
../Check/cholmod_check.c:1507:55: warning: 'psx' may be used uninitialized in this function [-Wmaybe-uninitialized]
  jnext, examine_super, nsuper, s, k1, k2, psi, psend, psx, nsrow, nscol,
                                                       ^
../Check/cholmod_check.c: In function 'cholmod_print_factor':
../Check/cholmod_check.c:86:2: warning: 'psxend' may be used uninitialized in this function [-Wmaybe-uninitialized]
  (Common->print_function) (format, arg) ; \
  ^
../Check/cholmod_check.c:1508:7: note: 'psxend' was declared here
  ps2, psxend, ssize, xsize, maxcsize, maxesize, nsrow2, jj, ii, xtype ;
       ^
../Check/cholmod_check.c:1507:55: warning: 'psx' may be used uninitialized in this function [-Wmaybe-uninitialized]
  jnext, examine_super, nsuper, s, k1, k2, psi, psend, psx, nsrow, nscol,
                                                       ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Check/cholmod_read.c -o cholmod_read.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Check/cholmod_write.c -o cholmod_write.o
../Check/cholmod_write.c: In function 'cholmod_write_sparse':
../Check/cholmod_write.c:365:33: warning: variable 'symmetry' set but not used [-Wunused-but-set-variable]
     Int nrow, ncol, is_complex, symmetry, i, j, q, iz, p, nz, is_binary, stype,
                                 ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Cholesky/cholmod_amd.c -o cholmod_amd.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Cholesky/cholmod_analyze.c -o cholmod_analyze.o
../Cholesky/cholmod_analyze.c: In function 'cholmod_analyze_p2':
../Cholesky/cholmod_analyze.c:422:69: warning: variable 'ncol' set but not used [-Wunused-but-set-variable]
     Int k, n, ordering, method, nmethods, status, default_strategy, ncol, uncol,
                                                                     ^
../Cholesky/cholmod_analyze.c:419:45: warning: variable 'CParent' set but not used [-Wunused-but-set-variable]
     Int *First, *Level, *Work4n, *Cmember, *CParent, *ColCount, *Lperm, *Parent,
                                             ^
../Cholesky/cholmod_analyze.c:419:35: warning: variable 'Cmember' set but not used [-Wunused-but-set-variable]
     Int *First, *Level, *Work4n, *Cmember, *CParent, *ColCount, *Lperm, *Parent,
                                   ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Cholesky/cholmod_colamd.c -o cholmod_colamd.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Cholesky/cholmod_etree.c -o cholmod_etree.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Cholesky/cholmod_factorize.c -o cholmod_factorize.o
../Cholesky/cholmod_factorize.c: In function 'cholmod_factorize_p':
../Cholesky/cholmod_factorize.c:114:37: warning: variable 'n' set but not used [-Wunused-but-set-variable]
     Int nrow, ncol, stype, convert, n, nsuper, grow2, status ;
                                     ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Cholesky/cholmod_postorder.c -o cholmod_postorder.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Cholesky/cholmod_rcond.c -o cholmod_rcond.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Cholesky/cholmod_resymbol.c -o cholmod_resymbol.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Cholesky/cholmod_rowcolcounts.c -o cholmod_rowcolcounts.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Cholesky/cholmod_rowfac.c -o cholmod_rowfac.o
In file included from ../Cholesky/cholmod_rowfac.c:164:0:
../Cholesky/t_cholmod_rowfac.c: In function 'r_cholmod_rowfac':
../Cholesky/t_cholmod_rowfac.c:51:46: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable]
  use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ;
                                              ^
../Cholesky/t_cholmod_rowfac.c:47:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                                                ^
../Cholesky/t_cholmod_rowfac.c:47:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                                      ^
../Cholesky/t_cholmod_rowfac.c:47:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                            ^
../Cholesky/t_cholmod_rowfac.c:47:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                  ^
In file included from ../Cholesky/cholmod_rowfac.c:166:0:
../Cholesky/t_cholmod_rowfac.c: In function 'c_cholmod_rowfac':
../Cholesky/t_cholmod_rowfac.c:51:46: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable]
  use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ;
                                              ^
../Cholesky/t_cholmod_rowfac.c:47:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                                                ^
../Cholesky/t_cholmod_rowfac.c:47:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                                      ^
../Cholesky/t_cholmod_rowfac.c:47:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                            ^
../Cholesky/t_cholmod_rowfac.c:47:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                  ^
In file included from ../Cholesky/cholmod_rowfac.c:168:0:
../Cholesky/t_cholmod_rowfac.c: In function 'z_cholmod_rowfac':
../Cholesky/t_cholmod_rowfac.c:51:46: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable]
  use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ;
                                              ^
In file included from ../Cholesky/cholmod_rowfac.c:172:0:
../Cholesky/t_cholmod_rowfac.c: In function 'r_cholmod_rowfac_mask':
../Cholesky/t_cholmod_rowfac.c:51:46: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable]
  use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ;
                                              ^
../Cholesky/t_cholmod_rowfac.c:47:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                                                ^
../Cholesky/t_cholmod_rowfac.c:47:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                                      ^
../Cholesky/t_cholmod_rowfac.c:47:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                            ^
../Cholesky/t_cholmod_rowfac.c:47:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                  ^
In file included from ../Cholesky/cholmod_rowfac.c:174:0:
../Cholesky/t_cholmod_rowfac.c: In function 'c_cholmod_rowfac_mask':
../Cholesky/t_cholmod_rowfac.c:51:46: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable]
  use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ;
                                              ^
../Cholesky/t_cholmod_rowfac.c:47:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                                                ^
../Cholesky/t_cholmod_rowfac.c:47:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                                      ^
../Cholesky/t_cholmod_rowfac.c:47:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                            ^
../Cholesky/t_cholmod_rowfac.c:47:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                  ^
In file included from ../Cholesky/cholmod_rowfac.c:176:0:
../Cholesky/t_cholmod_rowfac.c: In function 'z_cholmod_rowfac_mask':
../Cholesky/t_cholmod_rowfac.c:51:46: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable]
  use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ;
                                              ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Cholesky/cholmod_solve.c -o cholmod_solve.o
In file included from ../Cholesky/cholmod_solve.c:66:0:
../Cholesky/t_cholmod_solve.c: In function 'r_ldl_dsolve':
../Cholesky/t_cholmod_solve.c:64:23: warning: variable 'Yz' set but not used [-Wunused-but-set-variable]
     double *Lx, *Yx, *Yz ;
                       ^
In file included from ../Cholesky/cholmod_solve.c:69:0:
../Cholesky/t_cholmod_solve.c: In function 'c_ldl_dsolve':
../Cholesky/t_cholmod_solve.c:64:23: warning: variable 'Yz' set but not used [-Wunused-but-set-variable]
     double *Lx, *Yx, *Yz ;
                       ^
../Cholesky/cholmod_solve.c: In function 'iperm':
../Cholesky/cholmod_solve.c:337:13: warning: variable 'nk' set but not used [-Wunused-but-set-variable]
     Int k2, nk, p, k, j, nrow, ncol, d, dj, j2 ;
             ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Cholesky/cholmod_spsolve.c -o cholmod_spsolve.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../MatrixOps/cholmod_drop.c -o cholmod_drop.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../MatrixOps/cholmod_horzcat.c -o cholmod_horzcat.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../MatrixOps/cholmod_norm.c -o cholmod_norm.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../MatrixOps/cholmod_scale.c -o cholmod_scale.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../MatrixOps/cholmod_sdmult.c -o cholmod_sdmult.o
In file included from ../MatrixOps/cholmod_sdmult.c:46:0:
../MatrixOps/t_cholmod_sdmult.c: In function 'r_cholmod_sdmult':
../MatrixOps/t_cholmod_sdmult.c:55:17: warning: variable 'nrow' set but not used [-Wunused-but-set-variable]
     Int packed, nrow, ncol, j, k, p, pend, kcol, i ;
                 ^
../MatrixOps/t_cholmod_sdmult.c:52:47: warning: variable 'Wz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ;
                                               ^
../MatrixOps/t_cholmod_sdmult.c:52:38: warning: variable 'Yz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ;
                                      ^
../MatrixOps/t_cholmod_sdmult.c:52:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ;
                            ^
../MatrixOps/t_cholmod_sdmult.c:52:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ;
                  ^
In file included from ../MatrixOps/cholmod_sdmult.c:48:0:
../MatrixOps/t_cholmod_sdmult.c: In function 'c_cholmod_sdmult':
../MatrixOps/t_cholmod_sdmult.c:55:17: warning: variable 'nrow' set but not used [-Wunused-but-set-variable]
     Int packed, nrow, ncol, j, k, p, pend, kcol, i ;
                 ^
../MatrixOps/t_cholmod_sdmult.c:52:47: warning: variable 'Wz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ;
                                               ^
../MatrixOps/t_cholmod_sdmult.c:52:38: warning: variable 'Yz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ;
                                      ^
../MatrixOps/t_cholmod_sdmult.c:52:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ;
                            ^
../MatrixOps/t_cholmod_sdmult.c:52:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ;
                  ^
In file included from ../MatrixOps/cholmod_sdmult.c:50:0:
../MatrixOps/t_cholmod_sdmult.c: In function 'z_cholmod_sdmult':
../MatrixOps/t_cholmod_sdmult.c:55:17: warning: variable 'nrow' set but not used [-Wunused-but-set-variable]
     Int packed, nrow, ncol, j, k, p, pend, kcol, i ;
                 ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../MatrixOps/cholmod_ssmult.c -o cholmod_ssmult.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../MatrixOps/cholmod_submatrix.c -o cholmod_submatrix.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../MatrixOps/cholmod_vertcat.c -o cholmod_vertcat.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../MatrixOps/cholmod_symmetry.c -o cholmod_symmetry.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Modify/cholmod_rowadd.c -o cholmod_rowadd.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Modify/cholmod_rowdel.c -o cholmod_rowdel.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Modify/cholmod_updown.c -o cholmod_updown.o
../Modify/cholmod_updown.c: In function 'cholmod_updown_mask':
../Modify/cholmod_updown.c:410:33: warning: variable 'ps1' set but not used [-Wunused-but-set-variable]
  *Set_ps1 [32], *Set_ps2 [32], *ps1, *ps2 ;
                                 ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Supernodal/cholmod_super_numeric.c -o cholmod_super_numeric.o
In file included from ../Supernodal/cholmod_super_numeric.c:78:0:
../Supernodal/t_cholmod_super_numeric.c: In function 'r_cholmod_super_numeric':
../Supernodal/t_cholmod_super_numeric.c:111:33: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Lx, *Ax, *Fx, *Az, *Fz, *C ;
                                 ^
../Supernodal/t_cholmod_super_numeric.c:111:28: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Lx, *Ax, *Fx, *Az, *Fz, *C ;
                            ^
In file included from ../Supernodal/cholmod_super_numeric.c:80:0:
../Supernodal/t_cholmod_super_numeric.c: In function 'c_cholmod_super_numeric':
../Supernodal/t_cholmod_super_numeric.c:111:33: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Lx, *Ax, *Fx, *Az, *Fz, *C ;
                                 ^
../Supernodal/t_cholmod_super_numeric.c:111:28: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Lx, *Ax, *Fx, *Az, *Fz, *C ;
                            ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Supernodal/cholmod_super_solve.c -o cholmod_super_solve.o
In file included from ../Supernodal/cholmod_super_solve.c:28:0:
../Supernodal/t_cholmod_super_solve.c: In function 'r_cholmod_super_lsolve':
../Supernodal/t_cholmod_super_solve.c:33:10: warning: variable 'n' set but not used [-Wunused-but-set-variable]
  nsrow2, n, ps2, j, i, d, nrhs ;
          ^
../Supernodal/t_cholmod_super_solve.c: In function 'r_cholmod_super_ltsolve':
../Supernodal/t_cholmod_super_solve.c:241:10: warning: variable 'n' set but not used [-Wunused-but-set-variable]
  nsrow2, n, ps2, j, i, d, nrhs ;
          ^
In file included from ../Supernodal/cholmod_super_solve.c:30:0:
../Supernodal/t_cholmod_super_solve.c: In function 'c_cholmod_super_lsolve':
../Supernodal/t_cholmod_super_solve.c:33:10: warning: variable 'n' set but not used [-Wunused-but-set-variable]
  nsrow2, n, ps2, j, i, d, nrhs ;
          ^
../Supernodal/t_cholmod_super_solve.c: In function 'c_cholmod_super_ltsolve':
../Supernodal/t_cholmod_super_solve.c:241:10: warning: variable 'n' set but not used [-Wunused-but-set-variable]
  nsrow2, n, ps2, j, i, d, nrhs ;
          ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c ../Supernodal/cholmod_super_symbolic.c -o cholmod_super_symbolic.o
../Supernodal/cholmod_super_symbolic.c: In function 'cholmod_super_symbolic2':
../Supernodal/cholmod_super_symbolic.c:455:7: warning: variable 'totsize' set but not used [-Wunused-but-set-variable]
   Int totsize ;
       ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Core/cholmod_aat.c -o cholmod_l_aat.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Core/cholmod_add.c -o cholmod_l_add.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Core/cholmod_band.c -o cholmod_l_band.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Core/cholmod_change_factor.c -o cholmod_l_change_factor.o
In file included from ../Core/cholmod_change_factor.c:116:0:
../Core/t_cholmod_change_factor.c: In function 'r_change_simplicial_numeric':
../Core/t_cholmod_change_factor.c:40:18: warning: variable 'Lz' set but not used [-Wunused-but-set-variable]
     double *Lx, *Lz ;
                  ^
In file included from ../Core/cholmod_change_factor.c:118:0:
../Core/t_cholmod_change_factor.c: In function 'c_change_simplicial_numeric':
../Core/t_cholmod_change_factor.c:40:18: warning: variable 'Lz' set but not used [-Wunused-but-set-variable]
     double *Lx, *Lz ;
                  ^
../Core/cholmod_change_factor.c: In function 'simplicial_symbolic_to_super_symbolic':
../Core/cholmod_change_factor.c:265:17: warning: variable 'xsize' set but not used [-Wunused-but-set-variable]
     Int nsuper, xsize, ssize ;
                 ^
../Core/cholmod_change_factor.c: In function 'change_simplicial_numeric':
../Core/cholmod_change_factor.c:680:15: warning: variable 'Li' set but not used [-Wunused-but-set-variable]
     Int *Lp, *Li, *Lnz ;
               ^
../Core/cholmod_change_factor.c:680:10: warning: variable 'Lp' set but not used [-Wunused-but-set-variable]
     Int *Lp, *Li, *Lnz ;
          ^
../Core/cholmod_change_factor.c:679:18: warning: variable 'Lz' set but not used [-Wunused-but-set-variable]
     double *Lx, *Lz ;
                  ^
../Core/cholmod_change_factor.c:679:13: warning: variable 'Lx' set but not used [-Wunused-but-set-variable]
     double *Lx, *Lz ;
             ^
../Core/cholmod_change_factor.c: In function 'll_super_to_simplicial_numeric':
../Core/cholmod_change_factor.c:827:9: warning: variable 'n' set but not used [-Wunused-but-set-variable]
     Int n, lnz, s, nsuper, psi, psend, nsrow, nscol, k1, k2, erows ;
         ^
../Core/cholmod_change_factor.c:826:21: warning: variable 'Lpx' set but not used [-Wunused-but-set-variable]
     Int *Ls, *Lpi, *Lpx, *Super, *Li ;
                     ^
../Core/cholmod_change_factor.c:826:10: warning: variable 'Ls' set but not used [-Wunused-but-set-variable]
     Int *Ls, *Lpi, *Lpx, *Super, *Li ;
          ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Core/cholmod_common.c -o cholmod_l_common.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Core/cholmod_complex.c -o cholmod_l_complex.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Core/cholmod_copy.c -o cholmod_l_copy.o
../Core/cholmod_copy.c: In function 'cholmod_l_copy':
../Core/cholmod_copy.c:278:25: warning: variable 'lo' set but not used [-Wunused-but-set-variable]
     Int nrow, ncol, up, lo, values, diag, astype ;
                         ^
../Core/cholmod_copy.c:278:21: warning: variable 'up' set but not used [-Wunused-but-set-variable]
     Int nrow, ncol, up, lo, values, diag, astype ;
                     ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Core/cholmod_dense.c -o cholmod_l_dense.o
In file included from ../Core/cholmod_dense.c:48:0:
../Core/t_cholmod_dense.c: In function 'p_cholmod_sparse_to_dense':
../Core/t_cholmod_dense.c:30:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Xx, *Az, *Xz ;
                            ^
../Core/t_cholmod_dense.c:30:23: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Xx, *Az, *Xz ;
                       ^
../Core/t_cholmod_dense.c:30:13: warning: variable 'Ax' set but not used [-Wunused-but-set-variable]
     double *Ax, *Xx, *Az, *Xz ;
             ^
In file included from ../Core/cholmod_dense.c:50:0:
../Core/t_cholmod_dense.c: In function 'r_cholmod_sparse_to_dense':
../Core/t_cholmod_dense.c:30:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Xx, *Az, *Xz ;
                            ^
../Core/t_cholmod_dense.c:30:23: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Xx, *Az, *Xz ;
                       ^
../Core/t_cholmod_dense.c: In function 'r_cholmod_dense_to_sparse':
../Core/t_cholmod_dense.c:136:28: warning: variable 'Cz' set but not used [-Wunused-but-set-variable]
     double *Xx, *Cx, *Xz, *Cz ;
                            ^
../Core/t_cholmod_dense.c:136:23: warning: variable 'Xz' set but not used [-Wunused-but-set-variable]
     double *Xx, *Cx, *Xz, *Cz ;
                       ^
../Core/t_cholmod_dense.c: In function 'r_cholmod_copy_dense2':
../Core/t_cholmod_dense.c:229:28: warning: variable 'Yz' set but not used [-Wunused-but-set-variable]
     double *Xx, *Xz, *Yx, *Yz ;
                            ^
../Core/t_cholmod_dense.c:229:18: warning: variable 'Xz' set but not used [-Wunused-but-set-variable]
     double *Xx, *Xz, *Yx, *Yz ;
                  ^
In file included from ../Core/cholmod_dense.c:52:0:
../Core/t_cholmod_dense.c: In function 'c_cholmod_sparse_to_dense':
../Core/t_cholmod_dense.c:30:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Xx, *Az, *Xz ;
                            ^
../Core/t_cholmod_dense.c:30:23: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Xx, *Az, *Xz ;
                       ^
../Core/t_cholmod_dense.c: In function 'c_cholmod_dense_to_sparse':
../Core/t_cholmod_dense.c:136:28: warning: variable 'Cz' set but not used [-Wunused-but-set-variable]
     double *Xx, *Cx, *Xz, *Cz ;
                            ^
../Core/t_cholmod_dense.c:136:23: warning: variable 'Xz' set but not used [-Wunused-but-set-variable]
     double *Xx, *Cx, *Xz, *Cz ;
                       ^
../Core/t_cholmod_dense.c: In function 'c_cholmod_copy_dense2':
../Core/t_cholmod_dense.c:229:28: warning: variable 'Yz' set but not used [-Wunused-but-set-variable]
     double *Xx, *Xz, *Yx, *Yz ;
                            ^
../Core/t_cholmod_dense.c:229:18: warning: variable 'Xz' set but not used [-Wunused-but-set-variable]
     double *Xx, *Xz, *Yx, *Yz ;
                  ^
../Core/cholmod_dense.c: In function 'cholmod_l_eye':
../Core/cholmod_dense.c:303:15: warning: variable 'nz' set but not used [-Wunused-but-set-variable]
     Int i, n, nz ;
               ^
../Core/cholmod_dense.c:302:18: warning: variable 'Xz' set but not used [-Wunused-but-set-variable]
     double *Xx, *Xz ;
                  ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Core/cholmod_error.c -o cholmod_l_error.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Core/cholmod_factor.c -o cholmod_l_factor.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Core/cholmod_memory.c -o cholmod_l_memory.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Core/cholmod_sparse.c -o cholmod_l_sparse.o
../Core/cholmod_sparse.c: In function 'cholmod_l_copy_sparse':
../Core/cholmod_sparse.c:488:35: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable]
     Int p, pend, j, ncol, packed, nzmax, nz, xtype ;
                                   ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Core/cholmod_transpose.c -o cholmod_l_transpose.o
In file included from ../Core/cholmod_transpose.c:124:0:
../Core/t_cholmod_transpose.c: In function 'p_cholmod_transpose_unsym':
../Core/t_cholmod_transpose.c:47:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                                                                     ^
../Core/t_cholmod_transpose.c:47:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                                                        ^
../Core/t_cholmod_transpose.c:47:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                     ^
../Core/t_cholmod_transpose.c:46:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ;
                               ^
../Core/t_cholmod_transpose.c:46:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ;
                          ^
../Core/t_cholmod_transpose.c:45:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                            ^
../Core/t_cholmod_transpose.c:45:23: warning: variable 'Fx' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                       ^
../Core/t_cholmod_transpose.c:45:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                  ^
../Core/t_cholmod_transpose.c:45:13: warning: variable 'Ax' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
             ^
../Core/t_cholmod_transpose.c: In function 'p_cholmod_transpose_sym':
../Core/t_cholmod_transpose.c:143:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ;
                          ^
../Core/t_cholmod_transpose.c:142:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                            ^
../Core/t_cholmod_transpose.c:142:23: warning: variable 'Fx' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                       ^
../Core/t_cholmod_transpose.c:142:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                  ^
../Core/t_cholmod_transpose.c:142:13: warning: variable 'Ax' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
             ^
In file included from ../Core/cholmod_transpose.c:126:0:
../Core/t_cholmod_transpose.c: In function 'r_cholmod_transpose_unsym':
../Core/t_cholmod_transpose.c:47:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                                                                     ^
../Core/t_cholmod_transpose.c:47:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                                                        ^
../Core/t_cholmod_transpose.c:47:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                     ^
../Core/t_cholmod_transpose.c:46:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ;
                               ^
../Core/t_cholmod_transpose.c:46:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ;
                          ^
../Core/t_cholmod_transpose.c:45:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                            ^
../Core/t_cholmod_transpose.c:45:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                  ^
../Core/t_cholmod_transpose.c: In function 'r_cholmod_transpose_sym':
../Core/t_cholmod_transpose.c:143:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ;
                          ^
../Core/t_cholmod_transpose.c:142:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                            ^
../Core/t_cholmod_transpose.c:142:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                  ^
In file included from ../Core/cholmod_transpose.c:128:0:
../Core/t_cholmod_transpose.c: In function 'c_cholmod_transpose_unsym':
../Core/t_cholmod_transpose.c:47:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                                                                     ^
../Core/t_cholmod_transpose.c:47:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                                                        ^
../Core/t_cholmod_transpose.c:47:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                     ^
../Core/t_cholmod_transpose.c:46:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ;
                               ^
../Core/t_cholmod_transpose.c:46:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ;
                          ^
../Core/t_cholmod_transpose.c:45:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                            ^
../Core/t_cholmod_transpose.c:45:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                  ^
../Core/t_cholmod_transpose.c: In function 'c_cholmod_transpose_sym':
../Core/t_cholmod_transpose.c:143:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ;
                          ^
../Core/t_cholmod_transpose.c:142:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                            ^
../Core/t_cholmod_transpose.c:142:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                  ^
In file included from ../Core/cholmod_transpose.c:131:0:
../Core/t_cholmod_transpose.c: In function 'ct_cholmod_transpose_unsym':
../Core/t_cholmod_transpose.c:47:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                                                                     ^
../Core/t_cholmod_transpose.c:47:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                                                        ^
../Core/t_cholmod_transpose.c:47:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                     ^
../Core/t_cholmod_transpose.c:46:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ;
                               ^
../Core/t_cholmod_transpose.c:46:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ;
                          ^
../Core/t_cholmod_transpose.c:45:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                            ^
../Core/t_cholmod_transpose.c:45:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                  ^
../Core/t_cholmod_transpose.c: In function 'ct_cholmod_transpose_sym':
../Core/t_cholmod_transpose.c:143:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ;
                          ^
../Core/t_cholmod_transpose.c:142:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                            ^
../Core/t_cholmod_transpose.c:142:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Fx, *Fz ;
                  ^
In file included from ../Core/cholmod_transpose.c:133:0:
../Core/t_cholmod_transpose.c: In function 'z_cholmod_transpose_unsym':
../Core/t_cholmod_transpose.c:47:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                                                                     ^
../Core/t_cholmod_transpose.c:47:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                                                        ^
../Core/t_cholmod_transpose.c:47:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                     ^
../Core/t_cholmod_transpose.c:46:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ;
                               ^
../Core/t_cholmod_transpose.c:46:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ;
                          ^
../Core/t_cholmod_transpose.c: In function 'z_cholmod_transpose_sym':
../Core/t_cholmod_transpose.c:143:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ;
                          ^
In file included from ../Core/cholmod_transpose.c:136:0:
../Core/t_cholmod_transpose.c: In function 'zt_cholmod_transpose_unsym':
../Core/t_cholmod_transpose.c:47:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                                                                     ^
../Core/t_cholmod_transpose.c:47:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                                                        ^
../Core/t_cholmod_transpose.c:47:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable]
     Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ;
                     ^
../Core/t_cholmod_transpose.c:46:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ;
                               ^
../Core/t_cholmod_transpose.c:46:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ;
                          ^
../Core/t_cholmod_transpose.c: In function 'zt_cholmod_transpose_sym':
../Core/t_cholmod_transpose.c:143:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable]
     Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ;
                          ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Core/cholmod_triplet.c -o cholmod_l_triplet.o
In file included from ../Core/cholmod_triplet.c:108:0:
../Core/t_cholmod_triplet.c: In function 'p_cholmod_triplet_to_sparse':
../Core/t_cholmod_triplet.c:31:28: warning: variable 'Tz' set but not used [-Wunused-but-set-variable]
     double *Rx, *Rz, *Tx, *Tz ;
                            ^
../Core/t_cholmod_triplet.c:31:23: warning: variable 'Tx' set but not used [-Wunused-but-set-variable]
     double *Rx, *Rz, *Tx, *Tz ;
                       ^
../Core/t_cholmod_triplet.c:31:18: warning: variable 'Rz' set but not used [-Wunused-but-set-variable]
     double *Rx, *Rz, *Tx, *Tz ;
                  ^
../Core/t_cholmod_triplet.c:31:13: warning: variable 'Rx' set but not used [-Wunused-but-set-variable]
     double *Rx, *Rz, *Tx, *Tz ;
             ^
In file included from ../Core/cholmod_triplet.c:110:0:
../Core/t_cholmod_triplet.c: In function 'r_cholmod_triplet_to_sparse':
../Core/t_cholmod_triplet.c:31:28: warning: variable 'Tz' set but not used [-Wunused-but-set-variable]
     double *Rx, *Rz, *Tx, *Tz ;
                            ^
../Core/t_cholmod_triplet.c:31:18: warning: variable 'Rz' set but not used [-Wunused-but-set-variable]
     double *Rx, *Rz, *Tx, *Tz ;
                  ^
In file included from ../Core/cholmod_triplet.c:112:0:
../Core/t_cholmod_triplet.c: In function 'c_cholmod_triplet_to_sparse':
../Core/t_cholmod_triplet.c:31:28: warning: variable 'Tz' set but not used [-Wunused-but-set-variable]
     double *Rx, *Rz, *Tx, *Tz ;
                            ^
../Core/t_cholmod_triplet.c:31:18: warning: variable 'Rz' set but not used [-Wunused-but-set-variable]
     double *Rx, *Rz, *Tx, *Tz ;
                  ^
../Core/cholmod_triplet.c: In function 'cholmod_l_triplet_to_sparse':
../Core/cholmod_triplet.c:345:44: warning: variable 'ok' set but not used [-Wunused-but-set-variable]
     Int i, j, p, k, stype, nrow, ncol, nz, ok ;
                                            ^
../Core/cholmod_triplet.c:344:20: warning: variable 'Ri' set but not used [-Wunused-but-set-variable]
     Int *Wj, *Rp, *Ri, *Rnz, *Ti, *Tj ;
                    ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Core/cholmod_version.c -o cholmod_l_version.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Check/cholmod_check.c -o cholmod_l_check.o
../Check/cholmod_check.c: In function 'check_common':
../Check/cholmod_check.c:207:61: warning: variable 'init_print' set but not used [-Wunused-but-set-variable]
     Int i, nrow, nmethods, ordering, xworksize, amd_backup, init_print ;
                                                             ^
../Check/cholmod_check.c: In function 'check_dense':
../Check/cholmod_check.c:961:37: warning: variable 'nz' set but not used [-Wunused-but-set-variable]
     Int i, j, d, nrow, ncol, nzmax, nz, init_print, count, xtype ;
                                     ^
../Check/cholmod_check.c: In function 'check_factor':
../Check/cholmod_check.c:1508:2: warning: variable 'ps2' set but not used [-Wunused-but-set-variable]
  ps2, psxend, ssize, xsize, maxcsize, maxesize, nsrow2, jj, ii, xtype ;
  ^
../Check/cholmod_check.c:1506:9: warning: variable 'precise' set but not used [-Wunused-but-set-variable]
  count, precise, init_print, ilast, lnz, head, tail, jprev, plast,
         ^
../Check/cholmod_check.c:1505:38: warning: variable 'ordering' set but not used [-Wunused-but-set-variable]
     Int n, nzmax, j, p, pend, i, nz, ordering, space, is_monotonic, minor,
                                      ^
../Check/cholmod_check.c: In function 'cholmod_l_check_factor':
../Check/cholmod_check.c:1507:55: warning: 'psx' may be used uninitialized in this function [-Wmaybe-uninitialized]
  jnext, examine_super, nsuper, s, k1, k2, psi, psend, psx, nsrow, nscol,
                                                       ^
../Check/cholmod_check.c: In function 'cholmod_l_print_factor':
../Check/cholmod_check.c:1507:55: warning: 'psx' may be used uninitialized in this function [-Wmaybe-uninitialized]
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Check/cholmod_read.c -o cholmod_l_read.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Check/cholmod_write.c -o cholmod_l_write.o
../Check/cholmod_write.c: In function 'cholmod_l_write_sparse':
../Check/cholmod_write.c:365:33: warning: variable 'symmetry' set but not used [-Wunused-but-set-variable]
     Int nrow, ncol, is_complex, symmetry, i, j, q, iz, p, nz, is_binary, stype,
                                 ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Cholesky/cholmod_amd.c -o cholmod_l_amd.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Cholesky/cholmod_analyze.c -o cholmod_l_analyze.o
../Cholesky/cholmod_analyze.c: In function 'cholmod_l_analyze_p2':
../Cholesky/cholmod_analyze.c:422:69: warning: variable 'ncol' set but not used [-Wunused-but-set-variable]
     Int k, n, ordering, method, nmethods, status, default_strategy, ncol, uncol,
                                                                     ^
../Cholesky/cholmod_analyze.c:419:45: warning: variable 'CParent' set but not used [-Wunused-but-set-variable]
     Int *First, *Level, *Work4n, *Cmember, *CParent, *ColCount, *Lperm, *Parent,
                                             ^
../Cholesky/cholmod_analyze.c:419:35: warning: variable 'Cmember' set but not used [-Wunused-but-set-variable]
     Int *First, *Level, *Work4n, *Cmember, *CParent, *ColCount, *Lperm, *Parent,
                                   ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Cholesky/cholmod_colamd.c -o cholmod_l_colamd.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Cholesky/cholmod_etree.c -o cholmod_l_etree.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Cholesky/cholmod_factorize.c -o cholmod_l_factorize.o
../Cholesky/cholmod_factorize.c: In function 'cholmod_l_factorize_p':
../Cholesky/cholmod_factorize.c:114:37: warning: variable 'n' set but not used [-Wunused-but-set-variable]
     Int nrow, ncol, stype, convert, n, nsuper, grow2, status ;
                                     ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Cholesky/cholmod_postorder.c -o cholmod_l_postorder.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Cholesky/cholmod_rcond.c -o cholmod_l_rcond.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Cholesky/cholmod_resymbol.c -o cholmod_l_resymbol.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Cholesky/cholmod_rowcolcounts.c -o cholmod_l_rowcolcounts.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Cholesky/cholmod_rowfac.c -o cholmod_l_rowfac.o
In file included from ../Cholesky/cholmod_rowfac.c:164:0:
../Cholesky/t_cholmod_rowfac.c: In function 'r_cholmod_rowfac':
../Cholesky/t_cholmod_rowfac.c:51:46: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable]
  use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ;
                                              ^
../Cholesky/t_cholmod_rowfac.c:47:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                                                ^
../Cholesky/t_cholmod_rowfac.c:47:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                                      ^
../Cholesky/t_cholmod_rowfac.c:47:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                            ^
../Cholesky/t_cholmod_rowfac.c:47:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                  ^
In file included from ../Cholesky/cholmod_rowfac.c:166:0:
../Cholesky/t_cholmod_rowfac.c: In function 'c_cholmod_rowfac':
../Cholesky/t_cholmod_rowfac.c:51:46: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable]
  use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ;
                                              ^
../Cholesky/t_cholmod_rowfac.c:47:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                                                ^
../Cholesky/t_cholmod_rowfac.c:47:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                                      ^
../Cholesky/t_cholmod_rowfac.c:47:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                            ^
../Cholesky/t_cholmod_rowfac.c:47:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                  ^
In file included from ../Cholesky/cholmod_rowfac.c:168:0:
../Cholesky/t_cholmod_rowfac.c: In function 'z_cholmod_rowfac':
../Cholesky/t_cholmod_rowfac.c:51:46: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable]
  use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ;
                                              ^
In file included from ../Cholesky/cholmod_rowfac.c:172:0:
../Cholesky/t_cholmod_rowfac.c: In function 'r_cholmod_rowfac_mask':
../Cholesky/t_cholmod_rowfac.c:51:46: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable]
  use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ;
                                              ^
../Cholesky/t_cholmod_rowfac.c:47:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                                                ^
../Cholesky/t_cholmod_rowfac.c:47:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                                      ^
../Cholesky/t_cholmod_rowfac.c:47:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                            ^
../Cholesky/t_cholmod_rowfac.c:47:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                  ^
In file included from ../Cholesky/cholmod_rowfac.c:174:0:
../Cholesky/t_cholmod_rowfac.c: In function 'c_cholmod_rowfac_mask':
../Cholesky/t_cholmod_rowfac.c:51:46: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable]
  use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ;
                                              ^
../Cholesky/t_cholmod_rowfac.c:47:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                                                ^
../Cholesky/t_cholmod_rowfac.c:47:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                                      ^
../Cholesky/t_cholmod_rowfac.c:47:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                            ^
../Cholesky/t_cholmod_rowfac.c:47:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ;
                  ^
In file included from ../Cholesky/cholmod_rowfac.c:176:0:
../Cholesky/t_cholmod_rowfac.c: In function 'z_cholmod_rowfac_mask':
../Cholesky/t_cholmod_rowfac.c:51:46: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable]
  use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ;
                                              ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Cholesky/cholmod_solve.c -o cholmod_l_solve.o
In file included from ../Cholesky/cholmod_solve.c:66:0:
../Cholesky/t_cholmod_solve.c: In function 'r_ldl_dsolve':
../Cholesky/t_cholmod_solve.c:64:23: warning: variable 'Yz' set but not used [-Wunused-but-set-variable]
     double *Lx, *Yx, *Yz ;
                       ^
In file included from ../Cholesky/cholmod_solve.c:69:0:
../Cholesky/t_cholmod_solve.c: In function 'c_ldl_dsolve':
../Cholesky/t_cholmod_solve.c:64:23: warning: variable 'Yz' set but not used [-Wunused-but-set-variable]
     double *Lx, *Yx, *Yz ;
                       ^
../Cholesky/cholmod_solve.c: In function 'iperm':
../Cholesky/cholmod_solve.c:337:13: warning: variable 'nk' set but not used [-Wunused-but-set-variable]
     Int k2, nk, p, k, j, nrow, ncol, d, dj, j2 ;
             ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Cholesky/cholmod_spsolve.c -o cholmod_l_spsolve.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../MatrixOps/cholmod_drop.c -o cholmod_l_drop.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../MatrixOps/cholmod_horzcat.c -o cholmod_l_horzcat.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../MatrixOps/cholmod_norm.c -o cholmod_l_norm.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../MatrixOps/cholmod_scale.c -o cholmod_l_scale.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../MatrixOps/cholmod_sdmult.c -o cholmod_l_sdmult.o
In file included from ../MatrixOps/cholmod_sdmult.c:46:0:
../MatrixOps/t_cholmod_sdmult.c: In function 'r_cholmod_sdmult':
../MatrixOps/t_cholmod_sdmult.c:55:17: warning: variable 'nrow' set but not used [-Wunused-but-set-variable]
     Int packed, nrow, ncol, j, k, p, pend, kcol, i ;
                 ^
../MatrixOps/t_cholmod_sdmult.c:52:47: warning: variable 'Wz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ;
                                               ^
../MatrixOps/t_cholmod_sdmult.c:52:38: warning: variable 'Yz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ;
                                      ^
../MatrixOps/t_cholmod_sdmult.c:52:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ;
                            ^
../MatrixOps/t_cholmod_sdmult.c:52:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ;
                  ^
In file included from ../MatrixOps/cholmod_sdmult.c:48:0:
../MatrixOps/t_cholmod_sdmult.c: In function 'c_cholmod_sdmult':
../MatrixOps/t_cholmod_sdmult.c:55:17: warning: variable 'nrow' set but not used [-Wunused-but-set-variable]
     Int packed, nrow, ncol, j, k, p, pend, kcol, i ;
                 ^
../MatrixOps/t_cholmod_sdmult.c:52:47: warning: variable 'Wz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ;
                                               ^
../MatrixOps/t_cholmod_sdmult.c:52:38: warning: variable 'Yz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ;
                                      ^
../MatrixOps/t_cholmod_sdmult.c:52:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ;
                            ^
../MatrixOps/t_cholmod_sdmult.c:52:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ;
                  ^
In file included from ../MatrixOps/cholmod_sdmult.c:50:0:
../MatrixOps/t_cholmod_sdmult.c: In function 'z_cholmod_sdmult':
../MatrixOps/t_cholmod_sdmult.c:55:17: warning: variable 'nrow' set but not used [-Wunused-but-set-variable]
     Int packed, nrow, ncol, j, k, p, pend, kcol, i ;
                 ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../MatrixOps/cholmod_ssmult.c -o cholmod_l_ssmult.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../MatrixOps/cholmod_submatrix.c -o cholmod_l_submatrix.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../MatrixOps/cholmod_vertcat.c -o cholmod_l_vertcat.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../MatrixOps/cholmod_symmetry.c -o cholmod_l_symmetry.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Modify/cholmod_rowadd.c -o cholmod_l_rowadd.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Modify/cholmod_rowdel.c -o cholmod_l_rowdel.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Modify/cholmod_updown.c -o cholmod_l_updown.o
../Modify/cholmod_updown.c: In function 'cholmod_l_updown_mask':
../Modify/cholmod_updown.c:410:33: warning: variable 'ps1' set but not used [-Wunused-but-set-variable]
  *Set_ps1 [32], *Set_ps2 [32], *ps1, *ps2 ;
                                 ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Supernodal/cholmod_super_numeric.c -o cholmod_l_super_numeric.o
In file included from ../Supernodal/cholmod_super_numeric.c:78:0:
../Supernodal/t_cholmod_super_numeric.c: In function 'r_cholmod_super_numeric':
../Supernodal/t_cholmod_super_numeric.c:111:33: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Lx, *Ax, *Fx, *Az, *Fz, *C ;
                                 ^
../Supernodal/t_cholmod_super_numeric.c:111:28: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Lx, *Ax, *Fx, *Az, *Fz, *C ;
                            ^
In file included from ../Supernodal/cholmod_super_numeric.c:80:0:
../Supernodal/t_cholmod_super_numeric.c: In function 'c_cholmod_super_numeric':
../Supernodal/t_cholmod_super_numeric.c:111:33: warning: variable 'Fz' set but not used [-Wunused-but-set-variable]
     double *Lx, *Ax, *Fx, *Az, *Fz, *C ;
                                 ^
../Supernodal/t_cholmod_super_numeric.c:111:28: warning: variable 'Az' set but not used [-Wunused-but-set-variable]
     double *Lx, *Ax, *Fx, *Az, *Fz, *C ;
                            ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Supernodal/cholmod_super_solve.c -o cholmod_l_super_solve.o
In file included from ../Supernodal/cholmod_super_solve.c:28:0:
../Supernodal/t_cholmod_super_solve.c: In function 'r_cholmod_super_lsolve':
../Supernodal/t_cholmod_super_solve.c:33:10: warning: variable 'n' set but not used [-Wunused-but-set-variable]
  nsrow2, n, ps2, j, i, d, nrhs ;
          ^
../Supernodal/t_cholmod_super_solve.c: In function 'r_cholmod_super_ltsolve':
../Supernodal/t_cholmod_super_solve.c:241:10: warning: variable 'n' set but not used [-Wunused-but-set-variable]
  nsrow2, n, ps2, j, i, d, nrhs ;
          ^
In file included from ../Supernodal/cholmod_super_solve.c:30:0:
../Supernodal/t_cholmod_super_solve.c: In function 'c_cholmod_super_lsolve':
../Supernodal/t_cholmod_super_solve.c:33:10: warning: variable 'n' set but not used [-Wunused-but-set-variable]
  nsrow2, n, ps2, j, i, d, nrhs ;
          ^
../Supernodal/t_cholmod_super_solve.c: In function 'c_cholmod_super_ltsolve':
../Supernodal/t_cholmod_super_solve.c:241:10: warning: variable 'n' set but not used [-Wunused-but-set-variable]
  nsrow2, n, ps2, j, i, d, nrhs ;
          ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -DDLONG -c  ../Supernodal/cholmod_super_symbolic.c -o cholmod_l_super_symbolic.o
../Supernodal/cholmod_super_symbolic.c: In function 'cholmod_l_super_symbolic2':
../Supernodal/cholmod_super_symbolic.c:455:7: warning: variable 'totsize' set but not used [-Wunused-but-set-variable]
   Int totsize ;
       ^
C:/Rtools/mingw_32/bin/ar -rucs ../../CHOLMOD.a cholmod_aat.o cholmod_add.o cholmod_band.o cholmod_change_factor.o cholmod_common.o cholmod_complex.o cholmod_copy.o cholmod_dense.o cholmod_error.o cholmod_factor.o cholmod_memory.o cholmod_sparse.o cholmod_transpose.o cholmod_triplet.o cholmod_version.o cholmod_check.o cholmod_read.o cholmod_write.o cholmod_amd.o cholmod_analyze.o cholmod_colamd.o cholmod_etree.o cholmod_factorize.o cholmod_postorder.o cholmod_rcond.o cholmod_resymbol.o cholmod_rowcolcounts.o cholmod_rowfac.o cholmod_solve.o cholmod_spsolve.o cholmod_drop.o cholmod_horzcat.o cholmod_norm.o cholmod_scale.o cholmod_sdmult.o cholmod_ssmult.o cholmod_submatrix.o cholmod_vertcat.o cholmod_symmetry.o cholmod_rowadd.o cholmod_rowdel.o cholmod_updown.o cholmod_super_numeric.o cholmod_super_solve.o cholmod_super_symbolic.o  cholmod_l_aat.o cholmod_l_add.o cholmod_l_band.o cholmod_l_change_factor.o cholmod_l_common.o cholmod_l_complex.o cholmod_l_copy.o cholmod_l_dense.o cholmod_l_error.o cholmod_l_factor.o cholmod_l_memory.o cholmod_l_sparse.o cholmod_l_transpose.o cholmod_l_triplet.o cholmod_l_version.o cholmod_l_check.o cholmod_l_read.o cholmod_l_write.o cholmod_l_amd.o cholmod_l_analyze.o cholmod_l_colamd.o cholmod_l_etree.o cholmod_l_factorize.o cholmod_l_postorder.o cholmod_l_rcond.o cholmod_l_resymbol.o cholmod_l_rowcolcounts.o cholmod_l_rowfac.o cholmod_l_solve.o cholmod_l_spsolve.o cholmod_l_drop.o cholmod_l_horzcat.o cholmod_l_norm.o cholmod_l_scale.o cholmod_l_sdmult.o cholmod_l_ssmult.o cholmod_l_submatrix.o cholmod_l_vertcat.o cholmod_l_symmetry.o cholmod_l_rowadd.o cholmod_l_rowdel.o cholmod_l_updown.o cholmod_l_super_numeric.o cholmod_l_super_solve.o cholmod_l_super_symbolic.o 
( cd Source ; /rtools/bin/make -f "C:/projects/BUILD/R-source-win32/etc/i386/Makeconf" -f Makefile lib )
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c colamd_global.c -o colamd_global.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c colamd.c -o colamd.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -I../Include -DDLONG -c colamd.c -o colamd_l.o
C:/Rtools/mingw_32/bin/ar -rucs ../../COLAMD.a colamd_global.o colamd.o colamd_l.o
( cd Source ; /rtools/bin/make -f "C:/projects/BUILD/R-source-win32/etc/i386/Makeconf" -f Makefile lib )
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -I../Include -DDINT -c amd_aat.c -o amd_i_aat.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -I../Include -DDLONG -c amd_aat.c -o amd_l_aat.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -I../Include -DDINT -c amd_1.c -o amd_i_1.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -I../Include -DDLONG -c amd_1.c -o amd_l_1.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -I../Include -DDINT -c amd_2.c -o amd_i_2.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -I../Include -DDLONG -c amd_2.c -o amd_l_2.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -I../Include -DDINT -c amd_postorder.c -o amd_i_postorder.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -I../Include -DDLONG -c amd_postorder.c -o amd_l_postorder.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -I../Include -DDINT -c amd_post_tree.c -o amd_i_post_tree.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -I../Include -DDLONG -c amd_post_tree.c -o amd_l_post_tree.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -I../Include -DDINT -c amd_defaults.c -o amd_i_defaults.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -I../Include -DDLONG -c amd_defaults.c -o amd_l_defaults.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -I../Include -DDINT -c amd_order.c -o amd_i_order.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -I../Include -DDLONG -c amd_order.c -o amd_l_order.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -I../Include -DDINT -c amd_control.c -o amd_i_control.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -I../Include -DDLONG -c amd_control.c -o amd_l_control.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -I../Include -DDINT -c amd_info.c -o amd_i_info.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -I../Include -DDLONG -c amd_info.c -o amd_l_info.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -I../Include -DDINT -c amd_valid.c -o amd_i_valid.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -I../Include -DDLONG -c amd_valid.c -o amd_l_valid.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -I../Include -DDINT -c amd_preprocess.c -o amd_i_preprocess.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -I../Include -DDLONG -c amd_preprocess.c -o amd_l_preprocess.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -I../Include -DDINT -c amd_dump.c -o amd_i_dump.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -I../Include -DDLONG -c amd_dump.c -o amd_l_dump.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -I../Include -DDINT -c amd_global.c -o amd_i_global.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -I../Include -I../../SuiteSparse_config    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -I../Include -DDLONG -c amd_global.c -o amd_l_global.o
C:/Rtools/mingw_32/bin/ar -rucs ../../AMD.a amd_i_aat.o amd_l_aat.o amd_i_1.o amd_l_1.o amd_i_2.o amd_l_2.o amd_i_postorder.o amd_l_postorder.o amd_i_post_tree.o amd_l_post_tree.o amd_i_defaults.o amd_l_defaults.o amd_i_order.o amd_l_order.o amd_i_control.o amd_l_control.o amd_i_info.o amd_l_info.o amd_i_valid.o amd_l_valid.o amd_i_preprocess.o amd_l_preprocess.o amd_i_dump.o amd_l_dump.o amd_i_global.o amd_l_global.o 
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG -DNTIMER    -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c SuiteSparse_config.c -o SuiteSparse_config.o
C:/Rtools/mingw_32/bin/ar -rucs ../SuiteSparse_config.a SuiteSparse_config.o
C:\Rtools\mingw_32\bin\nm.exe: 'sublibs': No such file
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o Matrix.dll tmp.def CHMfactor.o Csparse.o TMatrix_as.o Tsparse.o init.o Mutils.o chm_common.o cs.o cs_utils.o dense.o dgCMatrix.o dgTMatrix.o dgeMatrix.o dpoMatrix.o dppMatrix.o dsCMatrix.o dsyMatrix.o dspMatrix.o dtCMatrix.o dtTMatrix.o dtrMatrix.o dtpMatrix.o factorizations.o ldense.o lgCMatrix.o sparseQR.o abIndex.o CHOLMOD.a COLAMD.a AMD.a SuiteSparse_config.a -LC:/projects/BUILD/R-source-win32/bin/i386 -lRlapack -LC:/projects/BUILD/R-source-win32/bin/i386 -lRblas -lgfortran -lm -lquadmath -LC:/projects/BUILD/R-source-win32/extsoft/lib/i386 -LC:/projects/BUILD/R-source-win32/extsoft/lib -LC:/projects/BUILD/R-source-win32/bin/i386 -lR
installing to C:/projects/BUILD/R-source-win32/library/Matrix/libs/i386
** R
** data
** inst
** tests
** byte-compile and prepare package for lazy loading
Creating a generic function for 'chol2inv' from 'base' in package 'Matrix'
    (from the saved implicit definition)
Creating a generic function for 'chol2inv' from package 'base' in package 'Matrix'
Creating a generic function for 'diag' from package 'base' in package 'Matrix'
Creating a generic function for 'drop' from package 'base' in package 'Matrix'
Creating a generic function for 'cov2cor' from package 'stats' in package 'Matrix'
Creating a generic function for 'unname' from package 'base' in package 'Matrix'
Creating a generic function for 'norm' from package 'base' in package 'Matrix'
Creating a generic function for 'rcond' from 'base' in package 'Matrix'
    (from the saved implicit definition)
Creating a generic function for 'rcond' from package 'base' in package 'Matrix'
in method for 'coerce' with signature '"matrix.csr","dgRMatrix"': no definition for class "matrix.csr"
in method for 'coerce' with signature '"dgRMatrix","matrix.csr"': no definition for class "matrix.csr"
in method for 'coerce' with signature '"matrix.csc","dgCMatrix"': no definition for class "matrix.csc"
in method for 'coerce' with signature '"dgCMatrix","matrix.csc"': no definition for class "matrix.csc"
in method for 'coerce' with signature '"matrix.coo","dgTMatrix"': no definition for class "matrix.coo"
in method for 'coerce' with signature '"dgTMatrix","matrix.coo"': no definition for class "matrix.coo"
in method for 'coerce' with signature '"dsparseMatrix","matrix.csr"': no definition for class "matrix.csr"
in method for 'coerce' with signature '"matrix.csr","dgCMatrix"': no definition for class "matrix.csr"
in method for 'coerce' with signature '"matrix.coo","dgCMatrix"': no definition for class "matrix.coo"
in method for 'coerce' with signature '"matrix.csr","RsparseMatrix"': no definition for class "matrix.csr"
in method for 'coerce' with signature '"matrix.csc","CsparseMatrix"': no definition for class "matrix.csc"
in method for 'coerce' with signature '"matrix.coo","TsparseMatrix"': no definition for class "matrix.coo"
in method for 'coerce' with signature '"matrix.csr","CsparseMatrix"': no definition for class "matrix.csr"
in method for 'coerce' with signature '"matrix.coo","CsparseMatrix"': no definition for class "matrix.coo"
in method for 'coerce' with signature '"matrix.csc","TsparseMatrix"': no definition for class "matrix.csc"
in method for 'coerce' with signature '"matrix.csr","TsparseMatrix"': no definition for class "matrix.csr"
in method for 'coerce' with signature '"CsparseMatrix","matrix.csr"': no definition for class "matrix.csr"
in method for 'coerce' with signature '"CsparseMatrix","matrix.coo"': no definition for class "matrix.coo"
in method for 'coerce' with signature '"CsparseMatrix","matrix.csc"': no definition for class "matrix.csc"
in method for 'coerce' with signature '"matrix.csr","Matrix"': no definition for class "matrix.csr"
in method for 'coerce' with signature '"matrix.coo","Matrix"': no definition for class "matrix.coo"
in method for 'coerce' with signature '"matrix.csc","Matrix"': no definition for class "matrix.csc"
Creating a generic function for 'colSums' from package 'base' in package 'Matrix'
Creating a generic function for 'colMeans' from package 'base' in package 'Matrix'
Creating a generic function for 'rowSums' from package 'base' in package 'Matrix'
Creating a generic function for 'rowMeans' from package 'base' in package 'Matrix'
in method for 'colSums' with signature 'x="igCMatrix"': no definition for class "igCMatrix"
in method for 'rowSums' with signature 'x="igCMatrix"': no definition for class "igCMatrix"
in method for 'colMeans' with signature 'x="igCMatrix"': no definition for class "igCMatrix"
in method for 'rowMeans' with signature 'x="igCMatrix"': no definition for class "igCMatrix"
Creating a generic function for 'zapsmall' from package 'base' in package 'Matrix'
Creating a generic function for 'diag<-' from package 'base' in package 'Matrix'
Creating a generic function for 'crossprod' from package 'base' in package 'Matrix'
Creating a generic function for 'tcrossprod' from package 'base' in package 'Matrix'
Creating a generic function for 'which' from package 'base' in package 'Matrix'
in method for 'coerce' with signature '"graphAM","sparseMatrix"': no definition for class "graphAM"
in method for 'coerce' with signature '"graph","CsparseMatrix"': no definition for class "graph"
in method for 'coerce' with signature '"graph","Matrix"': no definition for class "graph"
in method for 'coerce' with signature '"graphNEL","CsparseMatrix"': no definition for class "graphNEL"
in method for 'coerce' with signature '"graphNEL","TsparseMatrix"': no definition for class "graphNEL"
in method for 'coerce' with signature '"sparseMatrix","graph"': no definition for class "graph"
in method for 'coerce' with signature '"sparseMatrix","graphNEL"': no definition for class "graphNEL"
in method for 'coerce' with signature '"TsparseMatrix","graphNEL"': no definition for class "graphNEL"
Creating a generic function for 'qr.R' from package 'base' in package 'Matrix'
Creating a generic function for 'qr.Q' from package 'base' in package 'Matrix'
Creating a generic function for 'qr.qy' from package 'base' in package 'Matrix'
Creating a generic function for 'qr.qty' from package 'base' in package 'Matrix'
Creating a generic function for 'qr.coef' from package 'base' in package 'Matrix'
Creating a generic function for 'qr.resid' from package 'base' in package 'Matrix'
Creating a generic function for 'qr.fitted' from package 'base' in package 'Matrix'
Creating a generic function for 'toeplitz' from package 'stats' in package 'Matrix'
** help
*** installing help indices
  converting help for package 'Matrix'
    finding HTML links ... done
    BunchKaufman-methods                    html  
    CAex                                    html  
    CHMfactor-class                         html  
    Cholesky-class                          html  
    Cholesky                                html  
    CsparseMatrix-class                     html  
    Diagonal                                html  
    Hilbert                                 html  
    KNex                                    html  
    KhatriRao                               html  
    LU-class                                html  
    Matrix-class                            html  
    Matrix                                  html  
    MatrixClass                             html  
    MatrixFactorization-class               html  
    RsparseMatrix-class                     html  
    Schur-class                             html  
    Schur                                   html  
    SparseM-conv                            html  
    Subassign-methods                       html  
    TsparseMatrix-class                     html  
    USCounties                              html  
    Xtrct-methods                           html  
    abIndex-class                           html  
Rd warning: C:/Users/appveyor/AppData/Local/Temp/1/RtmpAbEZ3d/R.INSTALL7883c0b3aee/Matrix/man/abIndex-class.Rd:80: file link 'Ops' in package 'methods' does not exist and so has been treated as a topic
    abIseq                                  html  
    all-methods                             html  
    all.equal-methods                       html  
    atomicVector-class                      html  
    band                                    html  
    bandSparse                              html  
    bdiag                                   html  
    boolean-matprod                         html  
    cBind                                   html  
    chol                                    html  
    chol2inv-methods                        html  
    colSums                                 html  
    compMatrix-class                        html  
    condest                                 html  
    dMatrix-class                           html  
    ddenseMatrix-class                      html  
    ddiMatrix-class                         html  
    denseMatrix-class                       html  
    dgCMatrix-class                         html  
    dgRMatrix-class                         html  
    dgTMatrix-class                         html  
    dgeMatrix-class                         html  
    diagU2N                                 html  
    diagonalMatrix-class                    html  
    dpoMatrix-class                         html  
    drop0                                   html  
    dsCMatrix-class                         html  
    dsRMatrix-class                         html  
    dsparseMatrix-class                     html  
    dsyMatrix-class                         html  
    dtCMatrix-class                         html  
    dtRMatrix-class-def                     html  
    dtpMatrix-class                         html  
    dtrMatrix-class                         html  
    expand                                  html  
    expm                                    html  
    externalFormats                         html  
    facmul                                  html  
    forceSymmetric                          html  
    formatSparseM                           html  
    generalMatrix-class                     html  
    graph2T                                 html  
    image-methods                           html  
Rd warning: C:/Users/appveyor/AppData/Local/Temp/1/RtmpAbEZ3d/R.INSTALL7883c0b3aee/Matrix/man/image-methods.Rd:53: file link 'panel.levelplot.raster' in package 'lattice' does not exist and so has been treated as a topic
Rd warning: C:/Users/appveyor/AppData/Local/Temp/1/RtmpAbEZ3d/R.INSTALL7883c0b3aee/Matrix/man/image-methods.Rd:81: file link 'get.gpar' in package 'grid' does not exist and so has been treated as a topic
    indMatrix-class                         html  
    index-class                             html  
    invPerm                                 html  
    is.na-methods                           html  
    is.null.DN                              html  
    isSymmetric-methods                     html  
    isTriangular                            html  
    kronecker-methods                       html  
    ldenseMatrix-class                      html  
    ldiMatrix-class                         html  
    lgeMatrix-class                         html  
    lsparseMatrix-classes                   html  
    lsyMatrix-class                         html  
    ltrMatrix-class                         html  
    lu                                      html  
    matrix-products                         html  
Rd warning: C:/Users/appveyor/AppData/Local/Temp/1/RtmpAbEZ3d/R.INSTALL7883c0b3aee/Matrix/man/matrix-products.Rd:406: file link 'tcrossprod' in package 'base' does not exist and so has been treated as a topic
    nMatrix-class                           html  
    ndenseMatrix-class                      html  
    nearPD                                  html  
    ngeMatrix-class                         html  
    nnzero                                  html  
    norm                                    html  
    nsparseMatrix-classes                   html  
    nsyMatrix-class                         html  
    ntrMatrix-class                         html  
    number-class                            html  
    pMatrix-class                           html  
    printSpMatrix                           html  
    qr-methods                              html  
    rankMatrix                              html  
    rcond                                   html  
    rep2abI                                 html  
    replValue-class                         html  
    rleDiff-class                           html  
    rsparsematrix                           html  
    solve-methods                           html  
    spMatrix                                html  
    sparse.model.matrix                     html  
    sparseLU-class                          html  
    sparseMatrix-class                      html  
    sparseMatrix                            html  
    sparseQR-class                          html  
    sparseVector-class                      html  
    sparseVector                            html  
    symmetricMatrix-class                   html  
    symmpart                                html  
    triangularMatrix-class                  html  
    uniqTsparse                             html  
    unpack                                  html  
    unused-classes                          html  
    updown                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (Matrix)
Making 'packages.html' ... done

----- installing recommended package nlme
* installing *source* package 'nlme' ...
** package 'nlme' successfully unpacked and MD5 sums checked
** using non-staged installation
** libs
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c chol.f -o chol.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c corStruct.c -o corStruct.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c gnls.c -o gnls.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c init.c -o init.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c matrix.c -o matrix.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c nlOptimizer.c -o nlOptimizer.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c nlme.c -o nlme.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c nlmefit.c -o nlmefit.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c pdMat.c -o pdMat.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c pythag.c -o pythag.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c rs.f -o rs.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o nlme.dll tmp.def chol.o corStruct.o gnls.o init.o matrix.o nlOptimizer.o nlme.o nlmefit.o pdMat.o pythag.o rs.o -LC:/projects/BUILD/R-source-win32/extsoft/lib/i386 -LC:/projects/BUILD/R-source-win32/extsoft/lib -lgfortran -lm -lquadmath -LC:/projects/BUILD/R-source-win32/bin/i386 -lR
installing to C:/projects/BUILD/R-source-win32/library/nlme/libs/i386
** R
** data
*** moving datasets to lazyload DB
** inst
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'nlme'
    finding HTML links ... done
    ACF                                     html  
    ACF.gls                                 html  
    ACF.lme                                 html  
    Alfalfa                                 html  
    Assay                                   html  
    BodyWeight                              html  
    Cefamandole                             html  
    Coef                                    html  
    Covariate                               html  
    Covariate.varFunc                       html  
    Dialyzer                                html  
    Dim                                     html  
    Dim.corSpatial                          html  
    Dim.corStruct                           html  
    Dim.pdMat                               html  
    Earthquake                              html  
    Extract.pdMat                           html  
    Fatigue                                 html  
    Gasoline                                html  
    Glucose                                 html  
    Glucose2                                html  
    Gun                                     html  
    IGF                                     html  
    Initialize                              html  
    Initialize.corStruct                    html  
    Initialize.glsStruct                    html  
    Initialize.lmeStruct                    html  
    Initialize.reStruct                     html  
    Initialize.varFunc                      html  
    LDEsysMat                               html  
    Machines                                html  
    MathAchSchool                           html  
    MathAchieve                             html  
    Matrix                                  html  
    Matrix.pdMat                            html  
    Matrix.reStruct                         html  
    Meat                                    html  
    Milk                                    html  
    Muscle                                  html  
    Names                                   html  
    Names.formula                           html  
    Names.pdBlocked                         html  
    Names.pdMat                             html  
    Names.reStruct                          html  
    Nitrendipene                            html  
    Oats                                    html  
    Orthodont                               html  
    Ovary                                   html  
    Oxboys                                  html  
    Oxide                                   html  
    PBG                                     html  
    Phenobarb                               html  
    Pixel                                   html  
    Quinidine                               html  
    Rail                                    html  
    RatPupWeight                            html  
    Relaxin                                 html  
    Remifentanil                            html  
    Soybean                                 html  
    Spruce                                  html  
    Tetracycline1                           html  
    Tetracycline2                           html  
    VarCorr                                 html  
    Variogram                               html  
    Variogram.corExp                        html  
    Variogram.corGaus                       html  
    Variogram.corLin                        html  
    Variogram.corRatio                      html  
    Variogram.corSpatial                    html  
    Variogram.corSpher                      html  
    Variogram.default                       html  
    Variogram.gls                           html  
    Variogram.lme                           html  
    Wafer                                   html  
    Wheat                                   html  
    Wheat2                                  html  
    allCoef                                 html  
    anova.gls                               html  
    anova.lme                               html  
    as.matrix.corStruct                     html  
    as.matrix.pdMat                         html  
    as.matrix.reStruct                      html  
    asOneFormula                            html  
    asTable                                 html  
    augPred                                 html  
    balancedGrouped                         html  
    bdf                                     html  
    coef.corStruct                          html  
    coef.gnls                               html  
    coef.lmList                             html  
    coef.lme                                html  
    coef.modelStruct                        html  
    coef.pdMat                              html  
    coef.reStruct                           html  
    coef.varFunc                            html  
    collapse                                html  
    collapse.groupedData                    html  
    compareFits                             html  
    comparePred                             html  
    corAR1                                  html  
    corARMA                                 html  
    corCAR1                                 html  
    corClasses                              html  
    corCompSymm                             html  
    corExp                                  html  
    corFactor                               html  
    corFactor.corStruct                     html  
    corGaus                                 html  
    corLin                                  html  
    corMatrix                               html  
    corMatrix.corStruct                     html  
    corMatrix.pdMat                         html  
    corMatrix.reStruct                      html  
    corNatural                              html  
    corRatio                                html  
    corSpatial                              html  
    corSpher                                html  
    corSymm                                 html  
    ergoStool                               html  
    fdHess                                  html  
    fitted.glsStruct                        html  
    fitted.gnlsStruct                       html  
    fitted.lmList                           html  
    fitted.lme                              html  
    fitted.lmeStruct                        html  
    fitted.nlmeStruct                       html  
    fixed.effects                           html  
    fixef.lmList                            html  
    formula.pdBlocked                       html  
    formula.pdMat                           html  
    formula.reStruct                        html  
    gapply                                  html  
    getCovariate                            html  
    getCovariate.corStruct                  html  
    getCovariate.data.frame                 html  
    getCovariate.varFunc                    html  
    getCovariateFormula                     html  
    getData                                 html  
    getData.gls                             html  
    getData.lmList                          html  
    getData.lme                             html  
    getGroups                               html  
    getGroups.corStruct                     html  
    getGroups.data.frame                    html  
    getGroups.gls                           html  
    getGroups.lmList                        html  
    getGroups.lme                           html  
    getGroups.varFunc                       html  
    getGroupsFormula                        html  
    getResponse                             html  
    getResponseFormula                      html  
    getVarCov                               html  
    gls-internal                            html  
    gls                                     html  
    glsControl                              html  
    glsObject                               html  
    glsStruct                               html  
    gnls                                    html  
    gnlsControl                             html  
    gnlsObject                              html  
    gnlsStruct                              html  
    groupedData                             html  
    gsummary                                html  
    intervals                               html  
    intervals.gls                           html  
    intervals.lmList                        html  
    intervals.lme                           html  
    isBalanced                              html  
    isInitialized                           html  
    lmList                                  html  
    lmList.groupedData                      html  
    lme                                     html  
    lme.groupedData                         html  
    lme.lmList                              html  
    lmeControl                              html  
    lmeObject                               html  
    lmeStruct                               html  
    logDet                                  html  
    logDet.corStruct                        html  
    logDet.pdMat                            html  
    logDet.reStruct                         html  
    logLik.corStruct                        html  
    logLik.glsStruct                        html  
    logLik.gnls                             html  
    logLik.gnlsStruct                       html  
    logLik.lmList                           html  
    logLik.lme                              html  
    logLik.lmeStruct                        html  
    logLik.reStruct                         html  
    logLik.varFunc                          html  
    model.matrix.reStruct                   html  
    needUpdate                              html  
    needUpdate.modelStruct                  html  
    nlme                                    html  
    nlme.nlsList                            html  
    nlmeControl                             html  
    nlmeObject                              html  
    nlmeStruct                              html  
    nlsList                                 html  
    nlsList.selfStart                       html  
    pairs.compareFits                       html  
    pairs.lmList                            html  
    pairs.lme                               html  
    pdBlocked                               html  
    pdClasses                               html  
    pdCompSymm                              html  
    pdConstruct                             html  
    pdConstruct.pdBlocked                   html  
    pdDiag                                  html  
    pdFactor                                html  
    pdFactor.reStruct                       html  
    pdIdent                                 html  
    pdLogChol                               html  
    pdMat                                   html  
    pdMatrix                                html  
    pdMatrix.reStruct                       html  
    pdNatural                               html  
    pdSymm                                  html  
    phenoModel                              html  
    plot.ACF                                html  
    plot.Variogram                          html  
    plot.augPred                            html  
    plot.compareFits                        html  
    plot.gls                                html  
    plot.intervals.lmList                   html  
Rd warning: C:/Users/appveyor/AppData/Local/Temp/1/RtmpmkPkDL/R.INSTALL9bc535a1f46/nlme/man/plot.intervals.lmList.Rd:34: file link 'dotplot' in package 'lattice' does not exist and so has been treated as a topic
Rd warning: C:/Users/appveyor/AppData/Local/Temp/1/RtmpmkPkDL/R.INSTALL9bc535a1f46/nlme/man/plot.intervals.lmList.Rd:21: file link 'dotplot' in package 'lattice' does not exist and so has been treated as a topic
    plot.lmList                             html  
    plot.lme                                html  
    plot.nffGroupedData                     html  
    plot.nfnGroupedData                     html  
    plot.nmGroupedData                      html  
    plot.ranef.lmList                       html  
    plot.ranef.lme                          html  
Rd warning: C:/Users/appveyor/AppData/Local/Temp/1/RtmpmkPkDL/R.INSTALL9bc535a1f46/nlme/man/plot.ranef.lme.Rd:25: file link 'dotplot' in package 'lattice' does not exist and so has been treated as a topic
Rd warning: C:/Users/appveyor/AppData/Local/Temp/1/RtmpmkPkDL/R.INSTALL9bc535a1f46/nlme/man/plot.ranef.lme.Rd:65: file link 'dotplot' in package 'lattice' does not exist and so has been treated as a topic
Rd warning: C:/Users/appveyor/AppData/Local/Temp/1/RtmpmkPkDL/R.INSTALL9bc535a1f46/nlme/man/plot.ranef.lme.Rd:71: file link 'dotplot' in package 'lattice' does not exist and so has been treated as a topic
    pooledSD                                html  
    predict.gls                             html  
    predict.gnls                            html  
    predict.lmList                          html  
    predict.lme                             html  
    predict.nlme                            html  
    print.summary.pdMat                     html  
    print.varFunc                           html  
    qqnorm.gls                              html  
    qqnorm.lme                              html  
    quinModel                               html  
    random.effects                          html  
    ranef.lmList                            html  
    ranef.lme                               html  
    reStruct                                html  
    recalc                                  html  
    recalc.corStruct                        html  
    recalc.modelStruct                      html  
    recalc.reStruct                         html  
    recalc.varFunc                          html  
    residuals.gls                           html  
    residuals.glsStruct                     html  
    residuals.gnlsStruct                    html  
    residuals.lmList                        html  
    residuals.lme                           html  
    residuals.lmeStruct                     html  
    residuals.nlmeStruct                    html  
    simulate.lme                            html  
    solve.pdMat                             html  
    solve.reStruct                          html  
    splitFormula                            html  
    summary.corStruct                       html  
    summary.gls                             html  
    summary.lmList                          html  
    summary.lme                             html  
    summary.modelStruct                     html  
    summary.nlsList                         html  
    summary.pdMat                           html  
    summary.varFunc                         html  
    update.modelStruct                      html  
    update.varFunc                          html  
    varClasses                              html  
    varComb                                 html  
    varConstPower                           html  
    varExp                                  html  
    varFixed                                html  
    varFunc                                 html  
    varIdent                                html  
    varPower                                html  
    varWeights                              html  
    varWeights.glsStruct                    html  
    varWeights.lmeStruct                    html  
** building package indices
** testing if installed package can be loaded
* DONE (nlme)
Making 'packages.html' ... done

----- installing recommended package survival
* installing *source* package 'survival' ...
** package 'survival' successfully unpacked and MD5 sums checked
** using non-staged installation
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c agexact.c -o agexact.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c agfit4.c -o agfit4.o
agfit4.c: In function 'agfit4':
agfit4.c:575:24: warning: 'dtime' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     if (tstop[p] < dtime) break; /* no more to add */
                        ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c agfit5.c -o agfit5.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c agmart.c -o agmart.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c agmart2.c -o agmart2.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c agmart3.c -o agmart3.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c agscore.c -o agscore.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c agsurv3.c -o agsurv3.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c agsurv4.c -o agsurv4.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c agsurv5.c -o agsurv5.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c chinv2.c -o chinv2.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c chinv3.c -o chinv3.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c cholesky2.c -o cholesky2.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c cholesky3.c -o cholesky3.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c cholesky5.c -o cholesky5.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c chsolve2.c -o chsolve2.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c chsolve3.c -o chsolve3.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c chsolve5.c -o chsolve5.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c concordance1.c -o concordance1.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c concordance3.c -o concordance3.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c cox_Rcallback.c -o cox_Rcallback.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c coxcount1.c -o coxcount1.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c coxdetail.c -o coxdetail.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c coxexact.c -o coxexact.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c coxfit5.c -o coxfit5.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c coxfit6.c -o coxfit6.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c coxmart.c -o coxmart.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c coxmart2.c -o coxmart2.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c coxph_wtest.c -o coxph_wtest.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c coxsafe.c -o coxsafe.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c coxscho.c -o coxscho.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c coxscore.c -o coxscore.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c dmatrix.c -o dmatrix.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c doloop.c -o doloop.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c finegray.c -o finegray.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c gchol.c -o gchol.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c init.c -o init.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c norisk.c -o norisk.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c pyears1.c -o pyears1.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c pyears2.c -o pyears2.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c pyears3b.c -o pyears3b.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c pystep.c -o pystep.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c survConcordance.c -o survConcordance.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c survdiff2.c -o survdiff2.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c survfit4.c -o survfit4.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c survfitci.c -o survfitci.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c survfitkm.c -o survfitkm.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c survpenal.c -o survpenal.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c survreg6.c -o survreg6.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c survreg7.c -o survreg7.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c survregc1.c -o survregc1.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c survregc2.c -o survregc2.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c survsplit.c -o survsplit.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c tmerge.c -o tmerge.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o survival.dll tmp.def agexact.o agfit4.o agfit5.o agmart.o agmart2.o agmart3.o agscore.o agsurv3.o agsurv4.o agsurv5.o chinv2.o chinv3.o cholesky2.o cholesky3.o cholesky5.o chsolve2.o chsolve3.o chsolve5.o concordance1.o concordance3.o cox_Rcallback.o coxcount1.o coxdetail.o coxexact.o coxfit5.o coxfit6.o coxmart.o coxmart2.o coxph_wtest.o coxsafe.o coxscho.o coxscore.o dmatrix.o doloop.o finegray.o gchol.o init.o norisk.o pyears1.o pyears2.o pyears3b.o pystep.o survConcordance.o survdiff2.o survfit4.o survfitci.o survfitkm.o survpenal.o survreg6.o survreg7.o survregc1.o survregc2.o survsplit.o tmerge.o -LC:/projects/BUILD/R-source-win32/extsoft/lib/i386 -LC:/projects/BUILD/R-source-win32/extsoft/lib -LC:/projects/BUILD/R-source-win32/bin/i386 -lR
installing to C:/projects/BUILD/R-source-win32/library/survival/libs/i386
** R
** data
*** moving datasets to lazyload DB
** inst
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'survival'
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    Surv                                    html  
    Survmethods                             html  
    aareg                                   html  
    aeqSurv                                 html  
    agreg.fit                               html  
    aml                                     html  
    anova.coxph                             html  
    attrassign                              html  
    basehaz                                 html  
    bladder                                 html  
    cch                                     html  
    cgd                                     html  
    cgd0                                    html  
    cipoisson                               html  
Rd warning: C:/Users/appveyor/AppData/Local/Temp/1/RtmpycXGsM/R.INSTALL17860bf791d/survival/man/cipoisson.Rd:59: file link 'ppois' in package 'stats' does not exist and so has been treated as a topic
Rd warning: C:/Users/appveyor/AppData/Local/Temp/1/RtmpycXGsM/R.INSTALL17860bf791d/survival/man/cipoisson.Rd:59: file link 'qpois' in package 'stats' does not exist and so has been treated as a topic
    clogit                                  html  
    cluster                                 html  
    colon                                   html  
    concordance                             html  
    concordancefit                          html  
    cox.zph                                 html  
    coxph                                   html  
    coxph.control                           html  
    coxph.detail                            html  
    coxph.object                            html  
    coxph.wtest                             html  
    diabetic                                html  
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    finegray                                html  
    flchain                                 html  
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    heart                                   html  
    is.ratetable                            html  
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    levels.Surv                             html  
    lines.survfit                           html  
    logLik.coxph                            html  
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    predict.coxph                           html  
    predict.survreg                         html  
    print.aareg                             html  
    print.summary.coxph                     html  
    print.summary.survexp                   html  
    print.summary.survfit                   html  
    print.survfit                           html  
    pspline                                 html  
    pyears                                  html  
    quantile.survfit                        html  
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    residuals.coxph                         html  
    residuals.survreg                       html  
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    summary.aareg                           html  
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    summary.pyears                          html  
    summary.survexp                         html  
    summary.survfit                         html  
    survConcordance-deprecated              html  
    survSplit                               html  
    survdiff                                html  
    survexp                                 html  
    survexp.fit                             html  
    survexp.object                          html  
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    survfit                                 html  
    survfit.coxph                           html  
    survfit.formula                         html  
    survfit.matrix                          html  
    survfit.object                          html  
    survfitcoxph.fit                        html  
    survival-internal                       html  
    survobrien                              html  
    survreg                                 html  
    survreg.control                         html  
    survreg.distributions                   html  
    survreg.object                          html  
    survregDtest                            html  
    tcut                                    html  
    tmerge                                  html  
    tobin                                   html  
    transplant                              html  
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    untangle.specials                       html  
    uspop2                                  html  
    vcov.coxph                              html  
    veteran                                 html  
    xtfrm.Surv                              html  
    yates                                   html  
    yates_setup                             html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (survival)
Making 'packages.html' ... done

----- installing recommended package boot
* installing *source* package 'boot' ...
** package 'boot' successfully unpacked and MD5 sums checked
** using non-staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'boot'
    finding HTML links ... done
    EEF.profile                             html  
    Imp.Estimates                           html  
    abc.ci                                  html  
    acme                                    html  
    aids                                    html  
    aircondit                               html  
    amis                                    html  
    aml                                     html  
    beaver                                  html  
    bigcity                                 html  
    boot-practicals                         html  
    boot                                    html  
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    brambles                                html  
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    freq.array                              html  
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    glm.diag                                html  
    glm.diag.plots                          html  
    gravity                                 html  
    hirose                                  html  
    imp.weights                             html  
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    jack.after.boot                         html  
    k3.linear                               html  
    linear.approx                           html  
    lines.saddle.distn                      html  
    logit                                   html  
    manaus                                  html  
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    plot.boot                               html  
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    print.bootci                            html  
    print.saddle.distn                      html  
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    saddle                                  html  
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    saddle.distn.object                     html  
    salinity                                html  
    simplex                                 html  
    simplex.object                          html  
    smooth.f                                html  
    sunspot                                 html  
    survival                                html  
    tau                                     html  
    tilt.boot                               html  
    tsboot                                  html  
    tuna                                    html  
    urine                                   html  
    var.linear                              html  
    wool                                    html  
** building package indices
** testing if installed package can be loaded
* DONE (boot)
Making 'packages.html' ... done

----- installing recommended package cluster
* installing *source* package 'cluster' ...
** package 'cluster' successfully unpacked and MD5 sums checked
** using non-staged installation
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c clara.c -o clara.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c daisy.f -o daisy.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c dysta.f -o dysta.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c fanny.c -o fanny.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c init.c -o init.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c mona.c -o mona.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c pam.c -o pam.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c sildist.c -o sildist.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c spannel.c -o spannel.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c twins.c -o twins.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o cluster.dll tmp.def clara.o daisy.o dysta.o fanny.o init.o mona.o pam.o sildist.o spannel.o twins.o -LC:/projects/BUILD/R-source-win32/extsoft/lib/i386 -LC:/projects/BUILD/R-source-win32/extsoft/lib -lgfortran -lm -lquadmath -LC:/projects/BUILD/R-source-win32/bin/i386 -lR
installing to C:/projects/BUILD/R-source-win32/library/cluster/libs/i386
** R
** data
*** moving datasets to lazyload DB
** inst
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'cluster'
    finding HTML links ... done
    agnes                                   html  
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Rd warning: C:/Users/appveyor/AppData/Local/Temp/1/Rtmp8wLogk/R.INSTALLbd47f837c87/cluster/man/clusplot.default.Rd:212: file link 'cov.mve' in package 'MASS' does not exist and so has been treated as a topic
    clusplot.partition                      html  
    cluster-internal                        html  
    coef.hclust                             html  
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    dissimilarity.object                    html  
    ellipsoidhull                           html  
Rd warning: C:/Users/appveyor/AppData/Local/Temp/1/Rtmp8wLogk/R.INSTALLbd47f837c87/cluster/man/ellipsoidhull.Rd:36: file link 'cov.mve' in package 'MASS' does not exist and so has been treated as a topic
Rd warning: C:/Users/appveyor/AppData/Local/Temp/1/Rtmp8wLogk/R.INSTALLbd47f837c87/cluster/man/ellipsoidhull.Rd:87: file link 'cov.mve' in package 'MASS' does not exist and so has been treated as a topic
    fanny                                   html  
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    lower.to.upper.tri.inds                 html  
    mona                                    html  
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    partition.object                        html  
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Rd warning: C:/Users/appveyor/AppData/Local/Temp/1/Rtmp8wLogk/R.INSTALLbd47f837c87/cluster/man/plot.agnes.Rd:73: file link 'plot.dendrogram' in package 'stats' does not exist and so has been treated as a topic
    plot.diana                              html  
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    print.clara                             html  
    print.diana                             html  
    print.dissimilarity                     html  
Rd warning: C:/Users/appveyor/AppData/Local/Temp/1/Rtmp8wLogk/R.INSTALLbd47f837c87/cluster/man/print.dissimilarity.Rd:27: file link 'print.dist' in package 'stats' does not exist and so has been treated as a topic
    print.fanny                             html  
    print.mona                              html  
    print.pam                               html  
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    sizeDiss                                html  
    summary.agnes                           html  
    summary.clara                           html  
    summary.diana                           html  
    summary.mona                            html  
    summary.pam                             html  
    twins.object                            html  
    volume.ellipsoid                        html  
    votes.repub                             html  
    xclara                                  html  
** building package indices
** testing if installed package can be loaded
* DONE (cluster)
Making 'packages.html' ... done

----- installing recommended package codetools
* installing *source* package 'codetools' ...
** package 'codetools' successfully unpacked and MD5 sums checked
** using non-staged installation
** R
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'codetools'
    finding HTML links ... done
    checkUsage                              html  
    codetools                               html  
    findGlobals                             html  
    showTree                                html  
** building package indices
** testing if installed package can be loaded
* DONE (codetools)
Making 'packages.html' ... done

----- installing recommended package foreign
* installing *source* package 'foreign' ...
** package 'foreign' successfully unpacked and MD5 sums checked
** using non-staged installation
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c R_systat.c -o R_systat.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c Rdbfread.c -o Rdbfread.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c Rdbfwrite.c -o Rdbfwrite.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c SASxport.c -o SASxport.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c avl.c -o avl.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c dbfopen.c -o dbfopen.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c file-handle.c -o file-handle.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c format.c -o format.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c init.c -o init.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c minitab.c -o minitab.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c pfm-read.c -o pfm-read.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c sfm-read.c -o sfm-read.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c spss.c -o spss.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c stataread.c -o stataread.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o foreign.dll tmp.def R_systat.o Rdbfread.o Rdbfwrite.o SASxport.o avl.o dbfopen.o file-handle.o format.o init.o minitab.o pfm-read.o sfm-read.o spss.o stataread.o -LC:/projects/BUILD/R-source-win32/extsoft/lib/i386 -LC:/projects/BUILD/R-source-win32/extsoft/lib -LC:/projects/BUILD/R-source-win32/bin/i386 -lR
installing to C:/projects/BUILD/R-source-win32/library/foreign/libs/i386
** R
** inst
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'foreign'
    finding HTML links ... done
    lookup.xport                            html  
    read.S                                  html  
    read.arff                               html  
    read.dbf                                html  
    read.dta                                html  
    read.epiinfo                            html  
    read.mtp                                html  
    read.octave                             html  
    read.spss                               html  
    read.ssd                                html  
    read.systat                             html  
    read.xport                              html  
    write.arff                              html  
    write.dbf                               html  
    write.dta                               html  
    write.foreign                           html  
** building package indices
** testing if installed package can be loaded
* DONE (foreign)
Making 'packages.html' ... done

----- installing recommended package KernSmooth
* installing *source* package 'KernSmooth' ...
** package 'KernSmooth' successfully unpacked and MD5 sums checked
** using non-staged installation
** libs
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c blkest.f -o blkest.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c cp.f -o cp.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c dgedi.f -o dgedi.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c dgefa.f -o dgefa.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c dgesl.f -o dgesl.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c init.c -o init.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c linbin.f -o linbin.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c linbin2D.f -o linbin2D.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c locpoly.f -o locpoly.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c rlbin.f -o rlbin.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c sdiag.f -o sdiag.o
C:/Rtools/mingw_32/bin/gfortran      -O3  -mtune=generic -c sstdiag.f -o sstdiag.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o KernSmooth.dll tmp.def blkest.o cp.o dgedi.o dgefa.o dgesl.o init.o linbin.o linbin2D.o locpoly.o rlbin.o sdiag.o sstdiag.o -LC:/projects/BUILD/R-source-win32/bin/i386 -lRblas -lgfortran -lm -lquadmath -LC:/projects/BUILD/R-source-win32/extsoft/lib/i386 -LC:/projects/BUILD/R-source-win32/extsoft/lib -lgfortran -lm -lquadmath -LC:/projects/BUILD/R-source-win32/bin/i386 -lR
installing to C:/projects/BUILD/R-source-win32/library/KernSmooth/libs/i386
** R
** inst
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'KernSmooth'
    finding HTML links ... done
    bkde                                    html  
    bkde2D                                  html  
    bkfe                                    html  
    dpih                                    html  
    dpik                                    html  
    dpill                                   html  
    locpoly                                 html  
** building package indices
** testing if installed package can be loaded
* DONE (KernSmooth)
Making 'packages.html' ... done

----- installing recommended package rpart
* installing *source* package 'rpart' ...
** package 'rpart' successfully unpacked and MD5 sums checked
** using non-staged installation
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c anova.c -o anova.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c anovapred.c -o anovapred.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c branch.c -o branch.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c bsplit.c -o bsplit.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c choose_surg.c -o choose_surg.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c fix_cp.c -o fix_cp.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c free_tree.c -o free_tree.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c gini.c -o gini.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c graycode.c -o graycode.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c init.c -o init.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c insert_split.c -o insert_split.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c make_cp_list.c -o make_cp_list.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c make_cp_table.c -o make_cp_table.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c mysort.c -o mysort.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c nodesplit.c -o nodesplit.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c partition.c -o partition.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c poisson.c -o poisson.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c pred_rpart.c -o pred_rpart.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c print_tree.c -o print_tree.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c rpart.c -o rpart.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c rpart_callback.c -o rpart_callback.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c rpartexp.c -o rpartexp.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c rpartexp2.c -o rpartexp2.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c rpcountup.c -o rpcountup.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c rpmatrix.c -o rpmatrix.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c rundown.c -o rundown.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c rundown2.c -o rundown2.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c surrogate.c -o surrogate.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c usersplit.c -o usersplit.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c xpred.c -o xpred.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c xval.c -o xval.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o rpart.dll tmp.def anova.o anovapred.o branch.o bsplit.o choose_surg.o fix_cp.o free_tree.o gini.o graycode.o init.o insert_split.o make_cp_list.o make_cp_table.o mysort.o nodesplit.o partition.o poisson.o pred_rpart.o print_tree.o rpart.o rpart_callback.o rpartexp.o rpartexp2.o rpcountup.o rpmatrix.o rundown.o rundown2.o surrogate.o usersplit.o xpred.o xval.o -LC:/projects/BUILD/R-source-win32/extsoft/lib/i386 -LC:/projects/BUILD/R-source-win32/extsoft/lib -LC:/projects/BUILD/R-source-win32/bin/i386 -lR
installing to C:/projects/BUILD/R-source-win32/library/rpart/libs/i386
** R
** data
*** moving datasets to lazyload DB
** inst
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'rpart'
    finding HTML links ... done
    car.test.frame                          html  
    car90                                   html  
    cu.summary                              html  
    kyphosis                                html  
    labels.rpart                            html  
    meanvar.rpart                           html  
    na.rpart                                html  
    path.rpart                              html  
    plot.rpart                              html  
    plotcp                                  html  
    post.rpart                              html  
    predict.rpart                           html  
    print.rpart                             html  
    printcp                                 html  
    prune.rpart                             html  
    residuals.rpart                         html  
    rpart-internal                          html  
    rpart                                   html  
    rpart.control                           html  
    rpart.exp                               html  
    rpart.object                            html  
    rsq.rpart                               html  
    snip.rpart                              html  
    solder.balance                          html  
    stagec                                  html  
    summary.rpart                           html  
    text.rpart                              html  
    xpred.rpart                             html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (rpart)
Making 'packages.html' ... done

----- installing recommended package class
* installing *source* package 'class' ...
** package 'class' successfully unpacked and MD5 sums checked
** using non-staged installation
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c class.c -o class.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o class.dll tmp.def class.o -LC:/projects/BUILD/R-source-win32/extsoft/lib/i386 -LC:/projects/BUILD/R-source-win32/extsoft/lib -LC:/projects/BUILD/R-source-win32/bin/i386 -lR
installing to C:/projects/BUILD/R-source-win32/library/class/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'class'
    finding HTML links ... done
    SOM                                     html  
    batchSOM                                html  
    condense                                html  
    knn                                     html  
    knn.cv                                  html  
    knn1                                    html  
    lvq1                                    html  
    lvq2                                    html  
    lvq3                                    html  
    lvqinit                                 html  
    lvqtest                                 html  
    multiedit                               html  
    olvq1                                   html  
    reduce.nn                               html  
    somgrid                                 html  
** building package indices
** testing if installed package can be loaded
* DONE (class)
Making 'packages.html' ... done

----- installing recommended package nnet
* installing *source* package 'nnet' ...
** package 'nnet' successfully unpacked and MD5 sums checked
** using non-staged installation
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c nnet.c -o nnet.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o nnet.dll tmp.def nnet.o -LC:/projects/BUILD/R-source-win32/extsoft/lib/i386 -LC:/projects/BUILD/R-source-win32/extsoft/lib -LC:/projects/BUILD/R-source-win32/bin/i386 -lR
installing to C:/projects/BUILD/R-source-win32/library/nnet/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'nnet'
    finding HTML links ... done
    class.ind                               html  
    multinom                                html  
    nnet.Hess                               html  
    nnet                                    html  
    predict.nnet                            html  
    which.is.max                            html  
** building package indices
** testing if installed package can be loaded
* DONE (nnet)
Making 'packages.html' ... done

----- installing recommended package spatial
* installing *source* package 'spatial' ...
** package 'spatial' successfully unpacked and MD5 sums checked
** using non-staged installation
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c init.c -o init.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c krc.c -o krc.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c pps.c -o pps.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o spatial.dll tmp.def init.o krc.o pps.o -LC:/projects/BUILD/R-source-win32/extsoft/lib/i386 -LC:/projects/BUILD/R-source-win32/extsoft/lib -LC:/projects/BUILD/R-source-win32/bin/i386 -lR
installing to C:/projects/BUILD/R-source-win32/library/spatial/libs/i386
** R
** inst
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'spatial'
    finding HTML links ... done
    Kaver                                   html  
    Kenvl                                   html  
    Kfn                                     html  
    Psim                                    html  
    SSI                                     html  
    Strauss                                 html  
    anova.trls                              html  
    correlogram                             html  
    expcov                                  html  
    ppgetregion                             html  
    ppinit                                  html  
    pplik                                   html  
    ppregion                                html  
    predict.trls                            html  
    prmat                                   html  
    semat                                   html  
    surf.gls                                html  
    surf.ls                                 html  
    trls.influence                          html  
    trmat                                   html  
    variogram                               html  
** building package indices
** testing if installed package can be loaded
* DONE (spatial)
Making 'packages.html' ... done

----- installing recommended package mgcv
* installing *source* package 'mgcv' ...
** package 'mgcv' successfully unpacked and MD5 sums checked
** using non-staged installation
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"  -fopenmp   -O3 -Wall  -std=gnu99 -mtune=generic -c coxph.c -o coxph.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"  -fopenmp   -O3 -Wall  -std=gnu99 -mtune=generic -c discrete.c -o discrete.o
discrete.c: In function 'indReduce':
discrete.c:101:24: warning: 'wl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  i=ka[l+1];j=kb[l];Wij = wl[l];
                        ^
discrete.c:99:31: warning: 'ws' may be used uninitialized in this function [-Wmaybe-uninitialized]
         i=ka[l];j=kb[l+1];Wij = ws[l];
                               ^
discrete.c: In function 'XWXijs':
discrete.c:99:31: warning: 'ws' may be used uninitialized in this function [-Wmaybe-uninitialized]
discrete.c:86:28: note: 'ws' was declared here
   double Wij,*Cq,*Aq,*Cq1,*ws,*wl;
                            ^
discrete.c:101:24: warning: 'wl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  i=ka[l+1];j=kb[l];Wij = wl[l];
                        ^
discrete.c:86:32: note: 'wl' was declared here
   double Wij,*Cq,*Aq,*Cq1,*ws,*wl;
                                ^
discrete.c:99:31: warning: 'ws' may be used uninitialized in this function [-Wmaybe-uninitialized]
         i=ka[l];j=kb[l+1];Wij = ws[l];
                               ^
discrete.c:86:28: note: 'ws' was declared here
   double Wij,*Cq,*Aq,*Cq1,*ws,*wl;
                            ^
discrete.c:101:24: warning: 'wl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  i=ka[l+1];j=kb[l];Wij = wl[l];
                        ^
discrete.c:86:32: note: 'wl' was declared here
   double Wij,*Cq,*Aq,*Cq1,*ws,*wl;
                                ^
discrete.c:146:36: warning: 'D' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (trans) for (Aq=A,Cq = C,Cq1=C+rc*cc;Cq<Cq1;Cq+=rc,Aq+=ra)
                                    ^
discrete.c:834:9: note: 'D' was declared here
     *C,*D,*W,*wb,*p0,*p1,*p2,*p3,*pw,*pw1,*pl,*ps,*wi,*wsi,*wli,*wo,*psi,*pwi,*pli;
         ^
discrete.c:148:30: warning: 'C' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else for (Aq=A,Cq = C,Cq1=C+rc*cc;Cq<Cq1;Cq+=rc,Aq+=ra)
                              ^
discrete.c:834:6: note: 'C' was declared here
     *C,*D,*W,*wb,*p0,*p1,*p2,*p3,*pw,*pw1,*pl,*ps,*wi,*wsi,*wli,*wo,*psi,*pwi,*pli;
      ^
discrete.c:1034:87: warning: 'W' may be used uninitialized in this function [-Wmaybe-uninitialized]
    } else for (Kik=Ki,Kjk=Kj,p0=w,p1=w+n;p0<p1;p0++,Kik++,Kjk++) W[*Kik + mim * *Kjk] += *p0;
                                                                                       ^
discrete.c:876:84: warning: 'wl' may be used uninitialized in this function [-Wmaybe-uninitialized]
             for (;pw < p0;ps++,pw++,pl++,Kik++,Kjk++,Kjl1++,Kjk1++) x += Xi[*Kik]*(*pl * Xj[*Kjl1] + *pw * Xj[*Kjk] + *ps * Xj[*Kjk1]);
                                                                                    ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"  -fopenmp   -O3 -Wall  -std=gnu99 -mtune=generic -c gdi.c -o gdi.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"  -fopenmp   -O3 -Wall  -std=gnu99 -mtune=generic -c init.c -o init.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"  -fopenmp   -O3 -Wall  -std=gnu99 -mtune=generic -c magic.c -o magic.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"  -fopenmp   -O3 -Wall  -std=gnu99 -mtune=generic -c mat.c -o mat.o
mat.c: In function 'chol_down':
mat.c:1747:9: warning: unused variable 'j' [-Wunused-variable]
   int i,j,n1;
         ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"  -fopenmp   -O3 -Wall  -std=gnu99 -mtune=generic -c matrix.c -o matrix.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"  -fopenmp   -O3 -Wall  -std=gnu99 -mtune=generic -c mgcv.c -o mgcv.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"  -fopenmp   -O3 -Wall  -std=gnu99 -mtune=generic -c misc.c -o misc.o
misc.c: In function 'tweedious':
misc.c:401:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
       if (!ok) if (jal<jal_lim) { /* need to expand buffer storage*/
          ^
misc.c:485:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
       if (!ok) if (jal<jal_lim) { /* need to expand buffer storage*/
          ^
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"  -fopenmp   -O3 -Wall  -std=gnu99 -mtune=generic -c mvn.c -o mvn.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"  -fopenmp   -O3 -Wall  -std=gnu99 -mtune=generic -c qp.c -o qp.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"  -fopenmp   -O3 -Wall  -std=gnu99 -mtune=generic -c soap.c -o soap.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"  -fopenmp   -O3 -Wall  -std=gnu99 -mtune=generic -c sparse-smooth.c -o sparse-smooth.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/projects/BUILD/R-source-win32/include" -DNDEBUG     -I"C:/projects/BUILD/R-source-win32/extsoft/include"  -fopenmp   -O3 -Wall  -std=gnu99 -mtune=generic -c tprs.c -o tprs.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o mgcv.dll tmp.def coxph.o discrete.o gdi.o init.o magic.o mat.o matrix.o mgcv.o misc.o mvn.o qp.o soap.o sparse-smooth.o tprs.o -LC:/projects/BUILD/R-source-win32/bin/i386 -lRlapack -LC:/projects/BUILD/R-source-win32/bin/i386 -lRblas -lgfortran -lm -lquadmath -fopenmp -LC:/projects/BUILD/R-source-win32/extsoft/lib/i386 -LC:/projects/BUILD/R-source-win32/extsoft/lib -LC:/projects/BUILD/R-source-win32/bin/i386 -lR
installing to C:/projects/BUILD/R-source-win32/library/mgcv/libs/i386
** R
** data
** inst
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'mgcv'
    finding HTML links ... done
    Beta                                    html  
    FFdes                                   html  
    Predict.matrix                          html  
    Predict.matrix.cr.smooth                html  
    Predict.matrix.soap.film                html  
    Rrank                                   html  
    Sl.initial.repara                       html  
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Rd warning: C:/Users/appveyor/AppData/Local/Temp/1/Rtmp23QA6N/R.INSTALLb2076b56a77/mgcv/man/bam.Rd:14: file link 'parallel' in package 'parallel' does not exist and so has been treated as a topic
Rd warning: C:/Users/appveyor/AppData/Local/Temp/1/Rtmp23QA6N/R.INSTALLb2076b56a77/mgcv/man/bam.Rd:129: file link 'parLapply' in package 'parallel' does not exist and so has been treated as a topic
Rd warning: C:/Users/appveyor/AppData/Local/Temp/1/Rtmp23QA6N/R.INSTALLb2076b56a77/mgcv/man/bam.Rd:188: file link 'makeForkCluster' in package 'parallel' does not exist and so has been treated as a topic
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    mgcv-parallel                           html  
Rd warning: C:/Users/appveyor/AppData/Local/Temp/1/Rtmp23QA6N/R.INSTALLb2076b56a77/mgcv/man/mgcv-parallel.Rd:11: file link 'parallel' in package 'parallel' does not exist and so has been treated as a topic
    mini.roots                              html  
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    pen.edf                                 html  
    place.knots                             html  
    plot.gam                                html  
    polys.plot                              html  
    predict.bam                             html  
Rd warning: C:/Users/appveyor/AppData/Local/Temp/1/Rtmp23QA6N/R.INSTALLb2076b56a77/mgcv/man/predict.bam.Rd:76: file link 'parLapply' in package 'parallel' does not exist and so has been treated as a topic
    predict.gam                             html  
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    smooth.construct                        html  
    smooth.construct.ad.smooth.spec         html  
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    smooth.construct.t2.smooth.spec         html  
    smooth.construct.tensor.smooth.spec     html  
    smooth.construct.tp.smooth.spec         html  
    smooth.terms                            html  
    smooth2random                           html  
    smoothCon                               html  
    sp.vcov                                 html  
    spasm.construct                         html  
    step.gam                                html  
    summary.gam                             html  
    t2                                      html  
    te                                      html  
    tensor.prod.model.matrix                html  
    totalPenaltySpace                       html  
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    trind.generator                         html  
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    uniquecombs                             html  
    vcov.gam                                html  
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** building package indices
** testing if installed package can be loaded
* DONE (mgcv)
Making 'packages.html' ... done